Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_12044
- Subject:
- XM_017019500.1
- Aligned Length:
- 3367
- Identities:
- 1269
- Gaps:
- 2057
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGCGGCGGATCTGAACCTGGAGTGGATCTCCCTGCCCCGGTCCTGGACTTACGGGATCACCAGGGGCGGCCG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AGTCTTCTTCATCAACGAGGAGGCCAAGAGCACCACCTGGCTGCACCCCGTCACCGGCGAGGCGGTGGTCACCG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GACACCGGCGGCAGAGCACAGATTTGCCTACTGGCTGGGAAGAAGCATATACTTTTGAAGGTGCAAGATACTAT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 ATAAACCATAATGAAAGGAAAGTGACCTGCAAACATCCAGTCACAGGACAACCATCACAGGACAATTGTATTTT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TGTAGTGAATGAACAGACTGTTGCAACCATGACATCTGAAGAAAAGAAGGAACGGCCAATAAGTATGATAAATG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 AAGCTTCTAACTATAACGTGACTTCAGATTATGCAGTGCATCCAATGAGCCCTGTAGGCAGAACTTCACGAGCT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TCAAAAAAAGTTCATAATTTTGGAAAGAGGTCAAATTCAATTAAAAGGAATCCTAATGCACCGGTTGTCAGACG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 AGGTTGGCTTTATAAACAGGACAGTACTGGCATGAAATTGTGGAAGAAACGCTGGTTTGTGCTTTCTGACCTTT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GCCTCTTTTATTATAGAGATGAGAAAGAAGAGGGTATCCTGGGAAGCATACTGTTACCTAGTTTTCAGATAGCT 666
Query 1 ------------------------------------------------------------ATGCGGACCTATTA 14
||||||||||||||
Sbjct 667 TTGCTTACCTCTGAAGATCACATTAATCGCAAATATGCTTTTAAGGCAGCCCATCCAAACATGCGGACCTATTA 740
Query 15 TTTCTGCACTGATACAGGAAAGGAAATGGAGTTGTGGATGAAAGCCATGTTAGATGCTGCCCTAGTACAGACAG 88
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 TTTCTGCACTGATACAGGAAAGGAAATGGAGTTGTGGATGAAAGCCATGTTAGATGCTGCCCTAGTACAGACAG 814
Query 89 AACCTGTGAAAAGAGTGGACAAGATTACATCTGAAAATGCACCAACTAAAGAAACCAATAACATTCCCAACCAT 162
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 AACCTGTGAAAAGAGTGGACAAGATTACATCTGAAAATGCACCAACTAAAGAAACCAATAACATTCCCAACCAT 888
Query 163 AGAGTGCTAATTAAACCAGAGATCCAAAACAATCAAAAAAACAAGGAAATGAGCAAAATTGAAGAAAAAAAGGC 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 AGAGTGCTAATTAAACCAGAGATCCAAAACAATCAAAAAAACAAGGAAATGAGCAAAATTGAAGAAAAAAAGGC 962
Query 237 ATTAGAAGCTGAAAAATATGGATTTCAGAAGGATGGTCAAGATAGACCCTTAACAAAAATTAATAGTGTAAAGC 310
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 ATTAGAAGCTGAAAAATATGGATTTCAGAAGGATGGTCAAGATAGACCCTTAACAAAAATTAATAGTGTAAAGC 1036
Query 311 TGAATTCTCTGCCATCTGAATATGAGAGTGGGTCAGCATGCCCTGCTCAGACTGTGCACTACAGACCAATCAAC 384
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 TGAATTCTCTGCCATCTGAATATGAGAGTGGGTCAGCATGCCCTGCTCAGACTGTGCACTACAGACCAATCAAC 1110
Query 385 TTGAGCAGTTCAGAGAACAAAATAGTCAATGTTAGCCTGGCAGATCTTAGAGGTGGAAATCGCCCCAATACAGG 458
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 TTGAGCAGTTCAGAGAACAAAATAGTCAATGTTAGCCTGGCAGATCTTAGAGGTGGAAATCGCCCCAATACAGG 1184
Query 459 GCCCTTATACACAGAGGCCGATCGAGTCATACAGAGAACAAATTCAATGCAGCAGTTGGAACAGTGGATTAAAA 532
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 GCCCTTATACACAGAGGCCGATCGAGTCATACAGAGAACAAATTCAATGCAGCAGTTGGAACAGTGGATTAAAA 1258
Query 533 TCCAGAAGGGGAGGGGTCATGAAGAAGAAACCAGGGGAGTAATTTCTTACCAAACATTACCAAGAAATATGCCA 606
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 TCCAGAAGGGGAGGGGTCATGAAGAAGAAACCAGGGGAGTAATTTCTTACCAAACATTACCAAGAAATATGCCA 1332
Query 607 AGTCACAGAGCCCAGATTATGGCCCGCTACCCTGAAGGTTATAGAACACTCCCAAGAAACAGCAAGACAAGGCC 680
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 AGTCACAGAGCCCAGATTATGGCCCGCTACCCTGAAGGTTATAGAACACTCCCAAGAAACAGCAAGACAAGGCC 1406
Query 681 TGAAAGTATCTGCAGTGTAACCCCTTCCACTCATGACAAGACATTAGGACCCGGAGCGGAGGAGAAACGGAGGT 754
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 TGAAAGTATCTGCAGTGTAACCCCTTCCACTCATGACAAGACATTAGGACCCGGAGCGGAGGAGAAACGGAGGT 1480
Query 755 CCATGAGAGATGACACAATGTGGCAGCTCTACGAATGGCAGCAGCGTCAGTTTTATAACAAACAGAGCACCCTC 828
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 CCATGAGAGATGACACAATGTGGCAGCTCTACGAATGGCAGCAGCGTCAGTTTTATAACAAACAGAGCACCCTC 1554
Query 829 CCTCGACACAGTACTTTGAGTAGTCCCAAAACCATGGTAAATATTTCTGACCAGACAATGCACTCTATTCCCAC 902
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555 CCTCGACACAGTACTTTGAGTAGTCCCAAAACCATGGTAAATATTTCTGACCAGACAATGCACTCTATTCCCAC 1628
Query 903 ATCACCTTCCCACGGGTCAATAGCTGCTTATCAGGGATACTCCCCTCAACGAACTTACAGATCGGAAGTGTCTT 976
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629 ATCACCTTCCCACGGGTCAATAGCTGCTTATCAGGGATACTCCCCTCAACGAACTTACAGATCGGAAGTGTCTT 1702
Query 977 CACCAATTCAGAGAGGAGATGTGACAATAGACCGCAGACACAGGGCCCATCACCCTAAGCATGTCTATGTGCCT 1050
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703 CACCAATTCAGAGAGGAGATGTGACAATAGACCGCAGACACAGGGCCCATCACCCTAAGCATGTCTATGTGCCT 1776
Query 1051 GACAGAAGGTCAGTGCCAGCTGGCCTGACTTTACAGTCTGTTAGTCCCCAGAGCCTCCAAGGGAAAACGCTGTC 1124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777 GACAGAAGGTCAGTGCCAGCTGGCCTGACTTTACAGTCTGTTAGTCCCCAGAGCCTCCAAGGGAAAACGC---- 1846
Query 1125 ACAAGATGAAGGTAGAGGCACATTATACAAATACAGACCTGAAGAAGTAGATATTGATGCCAAGTTAAGCCGAT 1198
.|||| ||.||.|.| .||.|||.|
Sbjct 1847 ------------CAGAG------------------GAGCTTACG---------CTGCTGCTA------------ 1869
Query 1199 TATGTGAACAAGATAAAGTGGTGCATGCTCTGGAAGAGAAACTTCAGCAACTCCACAAGGAGAAATACACGCTT 1272
||||| ||| ||.||..|||||| .||..|..|||.|.||..|| .
Sbjct 1870 ------------ATAAA---------GCT--------GAGACGGCAGCAA-GCCGAACTGAGTAGTATCCG--G 1911
Query 1273 GAGCAAGCTTTGCTATCAGC-CAGCCAAGAGATAGAAATGCATGCAGATAA---------CCCAGCAGCCATTC 1336
|||||..|.|| ||| |||| .|||||||.||| |||| |||||
Sbjct 1912 GAGCATACGTT------AGCACAGC--------------TCATGCAGCTAAAGCTTGAGGCCCA-CAGCC---- 1960
Query 1337 AGACAGTGGTGTTACAAAGGGATGATTTACAAAATGGACTGCTTAGTACGTGTCGAGAACTT--TCTCGAGCCA 1408
||||| ||||.|.|.||| || ||.| |||
Sbjct 1961 --------------CAAAG-------------AATGAAATTCTT--------TC----ACATCATCT------- 1988
Query 1409 CTGCCGAATTGGAACGAGCATGGAGAGAATAT---GATAAGTTAGAATACGATGTAACTGTTACCAGGAACCAG 1479
||.|| ||||| |.||| |||| |||.| |.|| |.||| |||| ||.|.|
Sbjct 1989 ---CCAAA--GGAAC-ACCAT-------ATATTTGGATCA-TCAG----CTATG---CTGT-------AAACTG 2034
Query 1480 ATGCAAGAGCAGCTGGAT----CACCTTGGTGAAGTTCAGACGGAATCAGCAGGAATTCAGCGTGCACAGATTC 1549
||| ...||||.|| |.||
Sbjct 2035 ATG-----TTTGCTGTATGCTCCTCC------------------------------------------------ 2055
Query 1550 AGAAAGAACTTTGGCGAATTCAGGATGTCATGGAAGGGCTGAGTAAACATAAGCAGCAAAGAGGTACTACAGAA 1623
Sbjct 2056 -------------------------------------------------------------------------- 2055
Query 1624 ATAGGTATGATAGGATCAAAGCCTTTCTCAACAGTTAAGTACAAAAATGAGGGTCCAGATTATAGACTCTACAA 1697
Sbjct 2056 -------------------------------------------------------------------------- 2055
Query 1698 GAGTGAACCAGAGTTAACAACAGTGGCAGAAGTTGATGAATCTAATGGAGAAGAAAAATCAGAACCTGTTTCAG 1771
Sbjct 2056 -------------------------------------------------------------------------- 2055
Query 1772 AGATAGAAACTTCAGTTGTTAAAGGTTCCCACTTTCCTGTTGGAGTAGTCCCTCCAAGAGCAAAATCACCAACA 1845
Sbjct 2056 -------------------------------------------------------------------------- 2055
Query 1846 CCCGAATCTTCGACAATAGCTTCCTATGTAACCTTGAGGAAAACTAAGAAGATGATGGATCTAAGAACGGAAAG 1919
Sbjct 2056 -------------------------------------------------------------------------- 2055
Query 1920 ACCAAGAAGTGCAGTGGAACAGCTCTGTTTGGCTGAAAGTACTCGACCAAGGATGACTGTGGAAGAGCAAATGG 1993
Sbjct 2056 -------------------------------------------------------------------------- 2055
Query 1994 AAAGAATAAGAAGACATCAACAAGCGTGCCTGAGGGAGAAGAAAAAAGGGTTAAATGTTATCGGTGCTTCAGAC 2067
Sbjct 2056 -------------------------------------------------------------------------- 2055
Query 2068 CAGTCACCCTTACAAAGCCCTTCAAATTTAAGGGATAATCCATTTAGGACTACTCAGACTCGAAGGAGGGATGA 2141
Sbjct 2056 -------------------------------------------------------------------------- 2055
Query 2142 TAAGGAACTGGACACTGCCATTAGAGAAAATGATGTAAAGCCAGACCATGAAACTCCTGCAACAGAAATTGTTC 2215
Sbjct 2056 -------------------------------------------------------------------------- 2055
Query 2216 AACTAAAAGAAACCGAACCCCAAAATGTGGACTTCAGCAAAGAGTTAAAAAAAACTGAAAACATTTCATATGAA 2289
Sbjct 2056 -------------------------------------------------------------------------- 2055
Query 2290 ATGCTTTTTGAACCTGAGCCAAATGGAGTAAATTCTGTGGAAATGATGGATAAAGAAAGAAACAAAGACAAAAT 2363
Sbjct 2056 -------------------------------------------------------------------------- 2055
Query 2364 GCCTGAGGATGTTACATTCAGCCCTCAAGATGAAACACAGACCGCAAATCATAAACCAGAAGAGCATCCTGAAG 2437
Sbjct 2056 -------------------------------------------------------------------------- 2055
Query 2438 AAAATACAAAGAACAGTGTTGACGAACAGGAAGAAACTGTTATTTCTTACGAATCAACTCCTGAGGTTTCTAGA 2511
Sbjct 2056 -------------------------------------------------------------------------- 2055
Query 2512 GGAAATCAAACAATGGCAGTGAAAAGTCTGTCCCCATCTCCTGAGTCCTCGGCATCGCCAGTTCCATCCACTCA 2585
Sbjct 2056 -------------------------------------------------------------------------- 2055
Query 2586 GCCGCAGCTCACAGAAGGATCACATTTCATGTGTGTG 2622
Sbjct 2056 ------------------------------------- 2055
