Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_12087
- Subject:
- NM_001002243.3
- Aligned Length:
- 2724
- Identities:
- 413
- Gaps:
- 2310
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGAGCCAGACATCATTCGAATGTACTCTTCATCCCCACCACCATTAGACAATGGAGCAGAGGATGATGATGA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TGATGAATTTGGGGAATTTGGTGGGTTTTCAGAAGTTAGCCCTTCTGGTGTAGGGTTTGTTGATTTCGATACAC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CAGATTATACTCGTCCCAAGGAAGAGTTTGTACCTTCAAACCATTTTATGCCAATTCATGAATTCTCAGAAAAT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GTAGATAGCCTTACAAGCTTTAAGTCCATTAAAAATGGTAATGATAAGGACATCACTGCTGAACTTTCTGCTCC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TGTGAAAGGACAGTCTGATGTTTTACTTTCTACCACCAGCAAAGAAATAATTTCATCTGAAATGTTAGCTACTT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CCATTGATGGCATGGAAAGACCAGGAAATTTAAATAAAGTAGTGGAGCAGAGACAGAATGTTGGAACACTTGAA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 AGTTTCTCTCCAGGAGATTTTAGAACTAATATGAATGTTGTTCATCAAAACAAGCAGTTAGAGAGCTGCAATGG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TGAAAAGCCTCCTTGTCTGGAGATTCTAACAAATGGGTTTGCAGTGTTGGAAACTGTAAATCCTCAGGGAACAG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 ATGATCTGGACAATGTAGCTGATTCAAAGGGACGGAAGCCTCTTAGCACTCATAGCACTGAGTATAATTTAGAC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TCTGTACCTAGTCCTGCTGAGGAATTTGCAGATTTTGCCACATTTTCCAAAAAGGAAAGGATACAATTAGAAGA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 AATAGAATGTGCAGTTTTAAATGATAGAGAAGCACTAACCATTCGGGAAAACAATAAAATTAATAGAGTCAATG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 AACTGAATTCTGTAAAAGAAGTGGCTTTGGGTAGAAGCTTGGATAACAAAGGAGACACTGATGGAGAGGATCAG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GTTTGTGTTTCAGAAATAAGCATAGTGACTAACAGAGGTTTCAGTGTTGAAAAACAAGGCCTTCCAACACTGCA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 ACAGGATGAATTTTTACAGTCAGGTGTTCAGTCAAAGGCTTGGAGTTTGGTAGACTCAGCTGATAATTCAGAAG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CCATTAGGAGAGAACAATGTAAAACTGAAGAAAAACTTGACTTACTTACTTCTAAATGTGCTCACCTATGCATG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GATTCTGTTAAAACTTCTGATGATGAAGTTGGTTCTCCCAAAGAAGAAAGTAGAAAGTTTACTAATTTCCAAAG 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 CCCAAACATTGACCCCACAGAAGAAAATGATTTGGATGATTCTTTAAGTGTAAAAAATGGTGATAGTAGTAATG 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 ACTTTGTGACTTGCAATGATATCAATGAAGATGATTTTGGTGATTTTGGTGACTTTGGCTCTGCCAGTGGCTCA 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 ACTCCACCTTTTGTTACTGGTACTCAAGATTCAATGAGTGATGCCACTTTTGAAGAGTCTTCAGAGCACTTTCC 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 ACATTTTAGTGAACCAGGTGATGACTTTGGAGAATTTGGGGATATAAATGCTGTTTCTTGCCAAGAGGAGACAA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 TATTAACAAAGTCAGACCTAAAACAGACTTCTGATAATTTATCAGAAGAATGTCAATTGGCAAGAAAATCTAGT 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 GGAACAGGCACTGAACCTGTTGCAAAACTTAAAAATGGGCAAGAAGGTGAGATTGGACATTTTGATTCTGTGCC 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 AAATATTCAGGATGACTGCAATGGTTTTCAAGACTCTGATGATTTTGCAGACTTCAGTTCAGCTGGTCCTAGCC 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 AAGTTGTAGATTGGAATGCTTTTGAGGATGAACAAAAAGATAGTTGTTCTTGGGCTGCTTTTGGAGACCAGCAG 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 GCTACTGAATCTCATCATCGAAAGGAAGCCTGGCAGTCACATAGGACAGATGAAAATATTGATACTCCAGGAAC 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 CCCCAAAACGCACAGTGTACCTTCAGCAACTTCCAAAGGAGCAGTTGCTAGTGGCCATTTACAGGAATCAGCCA 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 CTTCAGTTCAGACAGCTTTATTAAACCGCCTGGAGCGAATTTTCGAAGCATGTTTTCCTTCCATACTTGTCCCT 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 GATGCTGAAGAGGAAGTTACTTCCCTGAAGCACTTGCTGGAAACAAGCACTTTGCCAATAAAAACGAGAGAGGC 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 CTTACCTGAAAGTGGGGAATTGCTAGATGTGTGGACTGAGCTACAGGATATCCATGATGCACATGGCTTGAGAT 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 ACCAGTGGGGCGGCTCCCATAGCAACAAGAAGCTTTTGTCCTCCTTGGGAATAGACACCCGAAACATTCTCTTC 2220
Query 1 ---------------------------------ATGTATGCAGCAGGATTGGGTATGTTAGAGCCCACCAAGGA 41
|||||||||||||||||||||||||||||||||||||||||
Sbjct 2221 ACGGGCAATAAGAAGCAGCCTGTTATAGTGCCCATGTATGCAGCAGGATTGGGTATGTTAGAGCCCACCAAGGA 2294
Query 42 ACCACTGAAACCACTTTCTGCTGCAGAAAAAATAGCTTCCATCGGTCAGACAGCCACCATGTCACCAGATATGA 115
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2295 ACCACTGAAACCACTTTCTGCTGCAGAAAAAATAGCTTCCATCGGTCAGACAGCCACCATGTCACCAGATATGA 2368
Query 116 ACACATGTACATCTGATCAGTTCCAGGAGTCTCTACCACCCGTCCAGTTTGACTGGAGTAGCAGTGGCCTTACT 189
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2369 ACACATGTACATCTGATCAGTTCCAGGAGTCTCTACCACCCGTCCAGTTTGACTGGAGTAGCAGTGGCCTTACT 2442
Query 190 AACCCTTTAGATGGTGTGGATCCGGAGTTGTATGAGTTAACAACTTCTAAGCTGGAAATCTCCACCTCAAGCCT 263
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2443 AACCCTTTAGATGGTGTGGATCCGGAGTTGTATGAGTTAACAACTTCTAAGCTGGAAATCTCCACCTCAAGCCT 2516
Query 264 CAAAGTGACTGATGCATTTGCAAGACTCATGTCTACAGTAGAGAAGACAAGCACATCTACCAGGAAACCGAAAA 337
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2517 CAAAGTGACTGATGCATTTGCAAGACTCATGTCTACAGTAGAGAAGACAAGCACATCTACCAGGAAACCGAAAA 2590
Query 338 GAGAAGGGCACCTAAGTGAAGAAGCTATCAAGGTGATCGCTGGCCTTCCTGACTTAACATTCATGCATGCCAAG 411
||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2591 GAGAAGAGCACCTAAGTGAAGAAGCTATCAAGGTGATCGCTGGCCTTCCTGACTTAACATTCATGCATGCCAAG 2664
Query 412 GTG--------------------------------------------------------- 414
|||
Sbjct 2665 GTGTTGATGTTCCCAGCCACGTTAACACCTTCCACAAGCTCTCAAGAAAAAGCAGACGGA 2724
