Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_12092
- Subject:
- XM_006532540.2
- Aligned Length:
- 2785
- Identities:
- 1036
- Gaps:
- 1616
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGAATGAAACAATGGCTACAGATTCTCCTCGGAGACCCAGTCGTTGTACTGGCGGAGTCGTGGTCCGCCCTCA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GGCCGTCACGGAGCAGTCCTACATGGAGAGCGTCGTGACTTTTCTGCAGGATGTTGTGCCACAGGCTTACAGTG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GGTCTCCCCTAACAGAAGAAAAGGAGAAGATAGTCTGGGTCAGATTTGAGAATGCAGATCTGAACGACACATCA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CGGAATCTAGAATTTCATGAACTGCATAGCACTGGAAATGAGCCTCCTCTGCTGGTTATGATCGGCTACAGTGA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CGGAATGCAGGTCTGGGGCATCCCTATCAGCGGGGAAGCCCAGGAGCTCTTCTCTGTACGACATGGTCCAGTCC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GAGCAGCTAGAATCTTGCCTGCTCCACAGTTGGGTGCCCAAAAGTGTGATAACTTTGCTGAGAAAAGACCTCTT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CTTGGTGTTTGTAAGAGCATTGGATCTTCAGGCACGACACCACCGTACTGCTGTGTGGATCTGTATTCACTCCG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GACTGGGGAAATGGTCAAGTCCATTCAGTTTAAAACACCCATTTATGATCTTCACTGTAACAAGCGGATCCTCG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TCGTAGTCTTGCAGGAGAAAATTGCTGCCTTTGATAGCTGTACTTTCACAAAAAAATTTTTTGTCACAAGTTGT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TATCCTTGTCCTGGGCCAAACATGAATCCCATTGCTCTTGGGAGCCGCTGGCTTGCTTATGCAGAAAATAAGCT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GATTCGCTGTCACCAGTCCCGTGGAGGAGCCTGTGGAGACAACATTCAGTCTTACACTGCCACTGTCCTTAGTG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CTGCTAAAACACTGAAAAGTGGCCTGACGATGGTTGGGAAAGTGGTGACTCAACTGACAGGCACACTGCCCTCA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GGGGTGACAGAAGATGACGTTGCCCTACACTGCAACTCAAGACGGAGCCCCTTGGTTCCAGGCATCATCACAGT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CATAGACACTGAGACGGTTGGAGAGGGCCAGGTGCTTGTAAGTGAGGACTCGGACAGTGATGGCATTGTGGCCC 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 ACTTCCCTGCCCATGAGAAGCCAGTATGCTGTATGGCTTTTAATACTAGTGGAATGCTTTTAGTCACAACAGAT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 ACTCTTGGCCATGACTTTCATGTCTTCCAAATCCTGACTCATCCTTGGTCATCATCACAGTGTGCTGTCCATCA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 TCTGTACACACTTCACAGGGGAGAGACCGAGGCCAAAGTTCAGGACATCTGTTTCAGCCATGATTGTCGTTGGG 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TGGTGGTCAGTACCCTCCGGGGTACGTCCCACGTTTTCCCCATCAATCCTTATGGTGGCCAGCCTTGTGTCCGC 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 ACACACATGTCACCACGAGTAGTCAATCGCATGAGCCGTTTCCAGAAAAGTGCTGGGCTGGAAGAGATTGAACA 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 AGAGCTGACATCTAAGCAAGGCGGCCGCTGTAGTCCTGTTCCAGGCCTGTCCAGCAGCCCTTCTGGCTCCCCGC 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 TGCATGGGAAGCTGACCAGCCAAGACTCTTACAATAACTTTACAAACAACAACCCTGGCAATCCCCGGCTTTCT 1554
Query 1 ---------------ATGGTAGTGATGCCTCTTGCACAAATCAAGCAGCCAATGACATTGGGGACCATCACCAA 59
||||||||||.|||||||||.||||||||.||||||||||||.||||.||||||||.||
Sbjct 1555 CCCCTCCCCAGCTTGATGGTAGTGACGCCTCTTGCGCAAATCAAACAGCCAATGACACTGGGAACCATCACGAA 1628
Query 60 ACGAACCG---------------------------------------------GCAAAGTTAAACCTCCTCCAC 88
.|||||.| |||||||||||.|.|||||||
Sbjct 1629 GCGAACAGGGCCTTATCTCTTTGGAGCGGGGTGTTTTTCCATAAAGGCTCCATGCAAAGTTAAATCACCTCCAC 1702
Query 89 AAATTTCACCCAGCAAATCGATGGGCGGAGAATTTTGTGTGGCTGCTATCTTCGGAACATCCAGGTCATGGTTT 162
|||||||.||.||||||||.||||||||.||.|||||.||||||||..|.||.||.||.||||||||.||||||
Sbjct 1703 AAATTTCTCCAAGCAAATCAATGGGCGGTGAGTTTTGCGTGGCTGCAGTGTTTGGGACTTCCAGGTCGTGGTTT 1776
Query 163 GCAAATAATGCAGGTCTGAAAAGAGAAAAAGATCAGTCCAAACAAGTTGTAGTTGAGTCCCTGTACATTATCAG 236
|||||.||.||.|||||||||.|.||||||||||||||||||||||||||||||||.||.||.|||||.|||||
Sbjct 1777 GCAAACAACGCTGGTCTGAAACGGGAAAAAGATCAGTCCAAACAAGTTGTAGTTGAATCTCTTTACATCATCAG 1850
Query 237 TTGCTATGGCACCTTAGTGGAACACATGATGGAGCCGCGACCCCTCAGCACTGCACCCAAGATTAGTGACGACA 310
.|||||.||.|||||||||||.||||||||.|||||.||.||..||||.|||||.||||||||.||||||||||
Sbjct 1851 CTGCTACGGGACCTTAGTGGAGCACATGATTGAGCCCCGGCCGATCAGTACTGCTCCCAAGATAAGTGACGACA 1924
Query 311 CACCACTGGAAATGATGACATCGCCTCGAGCCAGCTGGACTCTGGTTAGAACCCCTCAATGGAATGAATTGCAG 384
||||||||||.||.|||||.||.||.||.|||||||||||.||.||||||||.|||||.|||||||||.|||||
Sbjct 1925 CACCACTGGAGATAATGACGTCACCCCGTGCCAGCTGGACACTTGTTAGAACGCCTCAGTGGAATGAACTGCAG 1998
Query 385 CCACCGTTTAATGCAAACCACCCTCTGCTCCTCGCTGCAGATGCAGTACAGTATTATCAGTTCCTGCTTGCTGG 458
||.||.||.|||||.||.|||||||||||||||||||||||.|||||.||||||||.|||.|||||||.||.||
Sbjct 1999 CCGCCATTCAATGCGAATCACCCTCTGCTCCTCGCTGCAGAAGCAGTGCAGTATTACCAGCTCCTGCTGGCCGG 2072
Query 459 C-CTGGTTCCCCCTGGAAGTCCTGGGCCCATTACTCGACATGGGTCTTACGACAGTTTAGCTTCTGACCATAGT 531
| || .|||||||||||||||||||.||||||||||||||||||||.||.|||||.|||||.||||||||||||
Sbjct 2073 CTCT-CTTCCCCCTGGAAGTCCTGGCCCCATTACTCGACATGGGTCCTATGACAGCTTAGCCTCTGACCATAGT 2145
Query 532 GGACAGGAAGATGAAGAATGGCTTTCCCAGGTTGAAATTGTAACACACACTGGACCCCATAGACGTCTGTGGAT 605
|||||||||||||||||||||||||||||||||||||||||.||||||||.||||||||.||.||.||||||||
Sbjct 2146 GGACAGGAAGATGAAGAATGGCTTTCCCAGGTTGAAATTGTGACACACACCGGACCCCACAGGCGCCTGTGGAT 2219
Query 606 GGGTCCACAGTTCCAGTTCAAAACCATCCATCCCTCAGGCCAAACCACAGTTATCTCATCCAGTTCATCTGTGT 679
|||.|||||.|||||.||||||||||||||..||||||||||.|||||.||.||.|||.|.|||||.|||||||
Sbjct 2220 GGGCCCACAATTCCATTTCAAAACCATCCAAACCTCAGGCCAGACCACGGTCATATCAACTAGTTCTTCTGTGT 2293
Query 680 TGCAGTCTCATGGTCCGAGTGACACGCCACAGCCTCTTTTGGATTTTGATACAGATGATCTTGATCTCAACAGT 753
|.||.||.||.||.||.||.|||||.||||||||.||.|||||.||||||||.||||||||.|||||.|||||.
Sbjct 2294 TACAATCGCACGGACCTAGCGACACACCACAGCCGCTCTTGGACTTTGATACGGATGATCTAGATCTTAACAGC 2367
Query 754 CTCAGGATCCAGCCAGTCCGCTCTGACCCCGTCAGCATGCCAGGGTCATCCCGTCCAGTCTCTGATCGAAGGGG 827
||||||||||||||.||||||||||||||.||||||||||||||||||||||||.|.|||||||||||.|||||
Sbjct 2368 CTCAGGATCCAGCCTGTCCGCTCTGACCCAGTCAGCATGCCAGGGTCATCCCGTGCTGTCTCTGATCGGAGGGG 2441
Query 828 AGTTTCCACAGTGATTGATGCTGCCTCAGGTACCTTTGACAGGAGCGTGACCCTGCTGGAGGTGTGCGGGAGCT 901
||||||||||||||..||||||||||||||||||||||||.|||||||||||||||||||||||||.|||||||
Sbjct 2442 AGTTTCCACAGTGACCGATGCTGCCTCAGGTACCTTTGACCGGAGCGTGACCCTGCTGGAGGTGTGTGGGAGCT 2515
Query 902 GGCCTGAGGGCTTCGGGCTGCGGCACATGTCCTCCATGGAGCACACGGAGGAGGGCCTCCGGGAGCGACTTGCC 975
|||||||||||||||||||||||||.||||||||||||||||||.|.|||||||||||||||||.||.|||||.
Sbjct 2516 GGCCTGAGGGCTTCGGGCTGCGGCATATGTCCTCCATGGAGCACTCAGAGGAGGGCCTCCGGGAACGGCTTGCA 2589
Query 976 GACGCCATGGCCGAGTCACCTAGCCGGGACGTCGTGGGATCCGGAACAGAACTTCAGCGAGAGGGAAGCATCGA 1049
||.|||||||||||||||||.|||||.|||||.||||||||.||||||||||||||||||||||||||||||||
Sbjct 2590 GATGCCATGGCCGAGTCACCAAGCCGAGACGTTGTGGGATCTGGAACAGAACTTCAGCGAGAGGGAAGCATCGA 2663
Query 1050 GACTCTGAGTAACAGCTCAGGCTCCACCAGCGGCAGCATACCAAGAAACTTTGATGGCTACCGATCTCCGCTGC 1123
||||||||||||||||||.||||||||||||||||||||.|||||||||||.||||||||||||||||||||.|
Sbjct 2664 GACTCTGAGTAACAGCTCCGGCTCCACCAGCGGCAGCATCCCAAGAAACTTCGATGGCTACCGATCTCCGCTCC 2737
Query 1124 CCACCAATGAGAGCCAGCCCCTCAGCCTCTTCCCGACTGGCTTCCCG 1170
|.|||||.|||||||||||.||||||||||||||.|||||||||||.
Sbjct 2738 CTACCAACGAGAGCCAGCCGCTCAGCCTCTTCCCCACTGGCTTCCCC 2784
