Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_12102
- Subject:
- NM_001123384.2
- Aligned Length:
- 5109
- Identities:
- 561
- Gaps:
- 4548
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGCTCTCAGCAACCCCCCTGTATGGGAACGTTCACAGCTGGATGAACAGCGAGAGGGTCCGCATGTGTGGGGC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GAGCGAAGACAGGAAAATCCTTGTAAATGATGGTGACGCTTCAAAAGCCAGACTGGAACTGAGGGAAGAGAATC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCTTGAACCACAACGTGGTGGATGCGAGCACGGCCCATAGGATCGATGGCCTGGCAGCACTGAGCATGGACCGC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 ACTGGCCTGATCCGGGAAGGGCTGCGGGTCCCGGGAAACATCGTCTATTCTAGCTTGTGTGGACTGGGCTCAGA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GAAAGGTCGGGAGGCTGCCACAAGCACTCTAGGTGGCCTTGGGTTTTCTTCGGAAAGAAATCCAGAGATGCAGT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TCAAACCGAATACACCCGAGACAGTGGAGGCTTCTGCCGTCTCTGGAAAACCCCCAAATGGCTTCAGTGCTATA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TACAAAACACCGCCTGGAATACAAAAAAGTGCTGTAGCCACAGCAGAAGCGCTGGGCTTGGACAGGCCTGCCAG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CGACAAACAGAGCCCTCTCAACATCAATGGTGCTAGTTATCTGCGGCTGCCCTGGGTCAATCCTTACATGGAGG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GTGCCACGCCAGCCATCTACCCTTTCCTCGACTCGCCAAATAAGTATTCACTGAACATGTACAAGGCCTTGCTA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CCTCAGCAGTCCTACAGCTTGGCCCAGCCGCTGTATTCTCCAGTCTGCACCAATGGGGAGCGCTTTCTCTACCT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GCCGCCACCTCACTACGTCGGTCCCCACATCCCATCGTCCTTGGCATCACCCATGAGGCTCTCGACACCTTCGG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CCTCCCCAGCCATCCCGCCTCTCGTCCATTGCGCAGACAAAAGCCTCCCGTGGAAGATGGGCGTCAGCCCTGGG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 AATCCTGTTGATTCCCACGCCTATCCTCACATCCAGAACAGTAAGCAGCCCAGGGTTCCCTCTGCCAAGGCGGT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CACCAGTGGCCTGCCGGGGGACACAGCTCTCCTGTTGCCCCCCTCGCCTCGGCCGTCACCCCGAGTCCACCTTC 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CCACCCAGCCTGCTGCAGACACCTACTCGGAGTTCCACAAGCACTATGCCAGGATCTCCACCTCTCCTTCAGTT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GCCCTGTCAAAGCCATACATGACAGTTAGCAGCGAGTTCCCCGCGGCCAGGCTCTCCAATGGCAAGTATCCCAA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 GGCTCCGGAAGGGGGCGAAGGTGCCCAGCCAGTGCCCGGGCATGCCCGGAAGACAGCGGTTCAAGACAGAAAAG 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 ATGGCAGCTCACCTCCTCTGTTGGAGAAGCAGACCGTTACCAAAGACGTCACAGATAAGCCACTAGACTTGTCT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 TCTAAAGTGGTGGATGTAGATGCTTCCAAAGCTGACCACATGAAAAAGATGGCTCCCACGGTCCTGGTTCACAG 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 CAGGGCTGGAAGTGGCTTAGTGCTCTCCGGAAGTGAGATTCCGAAAGAAACACTATCTCCTCCAGGAAATGGTT 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 GTGCTATCTATAGATCTGAAATCATCAGCACTGCTCCCTCATCCTGGGTGGTGCCCGGGCCAAGTCCTAACGAA 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 GAGAACAATGGCAAAAGCATGTCGCTGAAAAACAAGGCATTGGACTGGGCGATACCACAGCAGCGGAGTTCATC 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 ATGCCCGCGCATGGGCGGCACCGATGCTGTCATCACTAACGTTTCAGGGTCAGTGTCGAGTGCAGGCCGCCCAG 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 CCTCCGCATCACCCGCCCCCAATGCCAATGCAGATGGCACCAAAACCAGCAGGAGCTCTGTAGAAACCACACCA 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 TCCGTTATTCAGCACGTGGGCCAGCCCCCGGCCACTCCTGCCAAGCACAGTAGCAGCACCAGCAGCAAGGGCGC 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 CAAAGCCAGCAACCCAGAACCGAGTTTCAAAGCAAACGAGAACGGCCTTCCACCAAGCTCTATATTTCTGTCTC 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 CAAATGAGGCATTCAGGTCCCCACCAATTCCCTACCCCAGGAGTTACCTCCCTTACCCAGCCCCTGAGGGCATT 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 GCTGTAAGTCCCCTCTCCTTACATGGCAAAGGACCTGTCTACCCTCACCCAGTTTTGTTACCCAATGGCAGTCT 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 GTTTCCTGGGCACCTTGCCCCAAAGCCTGGGCTGCCCTATGGGCTTCCCACCGGCCGTCCAGAGTTTGTGACCT 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 ACCAAGATGCCCTGGGGTTGGGCATGGTGCATCCCATGTTGATACCACACACGCCCATAGAGATTACTAAAGAG 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 GAGAAACCAGAGAGGAGATCCCGGTCCCATGAGAGAGCCCGTTACGAGGACCCAACCCTCCGGAATCGGTTTTC 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 CGAGATTTTGGAAACTAGCAGCACCAAGTTACATCCAGATGTCCCCACCGACAAGAACCTAAAGCCGAACCCCA 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 ACTGGAATCAAGGGAAGACTGTTGTCAAAAGCGACAAGCTTGTCTACGTAGACCTTCTCCGAGAAGAACCAGAT 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 GCTAAAACTGACACAAACGTGTCCAAACCCAGCTTTGCAGCAGAGAGTGTTGGCCAGAGCGCTGAGCCCCCCAA 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 GCCCTCAGTTGAGCCGGCCCTGCAGCAGCACCGTGATTTCATCGCCCTGAGAGAGGAGTTGGGGCGCATCAGTG 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 ACTTCCACGAAACTTATACTTTCAAACAGCCAGTCTTCACCGTAAGCAAGGACAGTGTTCTGGCAGGTACCAAC 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 AAAGAGAACCTAGGGTTGCCAGTCTCGACTCCATTCCTGGAGCCACCTCTGGGGAGCGATGGCCCTGCTGTAAC 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 TTTTGGTAAAACCCAAGAGGATCCCAAACCATTTTGTGTGGGCAGTGCCCCACCAAGTGTGGATGTGACCCCCA 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 CCTATACCAAAGATGGAGCTGATGAGGCTGAATCAAATGATGGCAAAGTTCTGAAACCGAAGCCATCTAAGCTG 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 GCAAAGAGAATCGCCAACTCAGCGGGTTACGTGGGTGACCGATTCAAATGTGTCACTACCGAACTGTATGCAGA 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 TTCCAGTCAGCTCAGCCGGGAGCAACGGGCATTGCAGCGTGCAATGATGCGCTTCTCAGAGTTGGAGATGAAAG 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 AAAGAGAAGGTGGCCACCCAGCAACCAAAGACTCCGAGATGTGCAAATTCAGCCCAGCCGACTGGGAAAGGTTG 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 AAAGGAAATCAGGACAAAAAGCCAAAGTCGGTCACCCTGGAGGAGGCCATTGCAGAACAGAACGAAAGTGAGAG 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 ATGCGAGTATAGTGTTGGAAACAAGCACCGTGATCCCTTTGAAGCCCCAGAGGACAAAGATCTTCCTGTGGAGA 3256
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3257 AGTACTTTGTGGAGAGGCAGCCTGTGAGCGAGCCTCCCGCAGACCAGGTGGCCTCGGACATGCCTCACAGCCCC 3330
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3331 ACCCTCCGGGTGGACAGGAAACGCAAAGTCTCAGGTGACAGCAGCCACACTGAGACCACTGCGGAGGAGGTGCC 3404
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3405 AGAGGACCCTCTGCTGAAAGCCAAACGCCGACGAGTCTCTAAAGGGCTCCATCCTAAAAAACAACGCCACTTGC 3478
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3479 TGCACCTTAGAGAACGATGGGAGCAGCAGGTGTCGGCAGCAGATGGCAAACCTGGCCGGCAAAGCAGGAAGGAA 3552
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3553 GTGACCCAGGCCACTCAGCCTGAGGCCATTCCTCAGGGGACTAACATCACTGAAGAGAAACCTGGCAGGAAAAG 3626
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3627 GGCAGAGGCCAAAGGCAACAGAAGCTGGTCGGAAGAGTCTCTTAAACCCAGTGACAATGAACAAGGCTTGCCTG 3700
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3701 TGTTCTCCGGCTCTCCGCCCATGAAGAGTCTTTCATCCACCAGTGCAGGCGGCAAAAAGCAGGCTCAGCCAAGC 3774
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3775 TGCGCACCAGCCTCCAGGCCGCCTGCCAAACAGCAGAAAATTAAAGAAAACCAGAAGACAGATGTGCTGTGTGC 3848
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3849 AGACGAAGAAGAGGATTGCCAGGCTGCCTCCCTGCTGCAGAAATACACCGACAACAGCGAGAAGCCATCCGGGA 3922
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3923 AGAGACTGTGCAAAACCAAACACTTGATCCCTCAGGAGTCCAGGCGGGGATTGCCACTGACAGGGGAATACTAC 3996
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3997 GTGGAGAATGCCGATGGCAAGGTGACTGTCCGGAGATTCAGAAAGCGGCCGGAGCCCAGTTCGGACTATGATCT 4070
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4071 GTCACCAGCCAAGCAGGAGCCAAAGCCCTTCGACCGCTTGCAGCAACTGCTACCAGCCTCCCAGTCCACACAGC 4144
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4145 TGCCATGCTCAAGTTCCCCTCAGGAGACCACCCAGTCTCGCCCTATGCCGCCGGAAGCACGGAGACTTATTGTC 4218
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4219 AATAAGAACGCTGGCGAGACCCTTCTGCAGCGGGCAGCCAGGCTTGGCTATGAGGAAGTGGTCCTGTACTGCTT 4292
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4293 AGAGAACAAGATTTGTGATGTAAATCATCGGGACAACGCAGGTTACTGCGCCCTGCATGAAGCTTGTGCTAGGG 4366
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4367 GCTGGCTCAACATTGTGCGACACCTCCTTGAATATGGCGCTGATGTCAACTGTAGTGCCCAGGATGGAACCAGG 4440
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4441 CCTCTGCACGATGCTGTTGAGAACGATCACTTGGAAATTGTCCGACTACTTCTCTCTTATGGTGCTGACCCCAC 4514
Query 1 ----------------------------------ATGACCCACAGTGAACTTATGGAAAAGTTCTTAACAGATT 40
||||||||||||||||||||||||||||||||||||||||
Sbjct 4515 CTTGGCTACGTACTCAGGTAGAACCATCATGAAAATGACCCACAGTGAACTTATGGAAAAGTTCTTAACAGATT 4588
Query 41 ATTTAAATGACCTCCAGGGTCGCAATGATGATGACGCCAGTGGCACTTGGGACTTCTATGGCAGCTCTGTTTGT 114
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4589 ATTTAAATGACCTCCAGGGTCGCAATGATGATGACGCCAGTGGCACTTGGGACTTCTATGGCAGCTCTGTTTGT 4662
Query 115 GAACCAGATGATGAAAGTGGCTATGATGTTTTAGCCAACCCCCCAGGACCAGAAGACCAGGATGATGATGACGA 188
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4663 GAACCAGATGATGAAAGTGGCTATGATGTTTTAGCCAACCCCCCAGGACCAGAAGACCAGGATGATGATGACGA 4736
Query 189 TGCCTATAGCGATGTGTTTGAATTTGAATTTTCAGAGACCCCCCTCTTACCGTGTTATAACATCCAAGTATCTG 262
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4737 TGCCTATAGCGATGTGTTTGAATTTGAATTTTCAGAGACCCCCCTCTTACCGTGTTATAACATCCAAGTATCTG 4810
Query 263 TGGCTCAGGGGCCACGAAACTGGCTACTGCTTTCGGATGTCCTTAAGAAATTGAAAATGTCCTCCCGCATATTT 336
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4811 TGGCTCAGGGGCCACGAAACTGGCTACTGCTTTCGGATGTCCTTAAGAAATTGAAAATGTCCTCCCGCATATTT 4884
Query 337 CGCTGCAATTTTCCAAACGTGGAAATTGTCACCATTGCAGAGGCAGAATTTTATCGGCAGGTTTCTGCAAGTCT 410
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4885 CGCTGCAATTTTCCAAACGTGGAAATTGTCACCATTGCAGAGGCAGAATTTTATCGGCAGGTTTCTGCAAGTCT 4958
Query 411 CTTGTTCTCTTGCTCCAAAGACCTGGAAGCCTTCAACCCTGAAAGTAAGGAGCTGTTAGATCTGGTGGAATTCA 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4959 CTTGTTCTCTTGCTCCAAAGACCTGGAAGCCTTCAACCCTGAAAGTAAGGAGCTGTTAGATCTGGTGGAATTCA 5032
Query 485 CGAACGAAATTCAGACTCTGCTGGGCTCCTCTGTAGAGTGGCTCCACCCCAGTGATCTGGCCTCAGACAACTAC 558
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5033 CGAACGAAATTCAGACTCTGCTGGGCTCCTCTGTAGAGTGGCTCCACCCCAGTGATCTGGCCTCAGACAACTAC 5106
Query 559 TGG 561
|||
Sbjct 5107 TGG 5109
