Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_12102
- Subject:
- NM_001123385.2
- Aligned Length:
- 5265
- Identities:
- 561
- Gaps:
- 4704
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGCTCTCAGCAACCCCCCTGTATGGGAACGTTCACAGCTGGATGAACAGCGAGAGGGTCCGCATGTGTGGGGC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GAGCGAAGACAGGAAAATCCTTGTAAATGATGGTGACGCTTCAAAAGCCAGACTGGAACTGAGGGAAGAGAATC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCTTGAACCACAACGTGGTGGATGCGAGCACGGCCCATAGGATCGATGGCCTGGCAGCACTGAGCATGGACCGC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 ACTGGCCTGATCCGGGAAGGGCTGCGGGTCCCGGGAAACATCGTCTATTCTAGCTTGTGTGGACTGGGCTCAGA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GAAAGGTCGGGAGGCTGCCACAAGCACTCTAGGTGGCCTTGGGTTTTCTTCGGAAAGAAATCCAGAGATGCAGT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TCAAACCGAATACACCCGAGACAGTGGAGGCTTCTGCCGTCTCTGGAAAACCCCCAAATGGCTTCAGTGCTATA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TACAAAACACCGCCTGGAATACAAAAAAGTGCTGTAGCCACAGCAGAAGCGCTGGGCTTGGACAGGCCTGCCAG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CGACAAACAGAGCCCTCTCAACATCAATGGTGCTAGTTATCTGCGGCTGCCCTGGGTCAATCCTTACATGGAGG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GTGCCACGCCAGCCATCTACCCTTTCCTCGACTCGCCAAATAAGTATTCACTGAACATGTACAAGGCCTTGCTA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CCTCAGCAGTCCTACAGCTTGGCCCAGCCGCTGTATTCTCCAGTCTGCACCAATGGGGAGCGCTTTCTCTACCT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GCCGCCACCTCACTACGTCGGTCCCCACATCCCATCGTCCTTGGCATCACCCATGAGGCTCTCGACACCTTCGG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CCTCCCCAGCCATCCCGCCTCTCGTCCATTGCGCAGACAAAAGCCTCCCGTGGAAGATGGGCGTCAGCCCTGGG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 AATCCTGTTGATTCCCACGCCTATCCTCACATCCAGAACAGTAAGCAGCCCAGGGTTCCCTCTGCCAAGGCGGT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CACCAGTGGCCTGCCGGGGGACACAGCTCTCCTGTTGCCCCCCTCGCCTCGGCCGTCACCCCGAGTCCACCTTC 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CCACCCAGCCTGCTGCAGACACCTACTCGGAGTTCCACAAGCACTATGCCAGGATCTCCACCTCTCCTTCAGTT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GCCCTGTCAAAGCCATACATGACAGTTAGCAGCGAGTTCCCCGCGGCCAGGCTCTCCAATGGCAAGTATCCCAA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 GGCTCCGGAAGGGGGCGAAGGTGCCCAGCCAGTGCCCGGGCATGCCCGGAAGACAGCGGTTCAAGACAGAAAAG 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 ATGGCAGCTCACCTCCTCTGTTGGAGAAGCAGACCGTTACCAAAGACGTCACAGATAAGCCACTAGACTTGTCT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 TCTAAAGTGGTGGATGTAGATGCTTCCAAAGCTGACCACATGAAAAAGATGGCTCCCACGGTCCTGGTTCACAG 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 CAGGGCTGGAAGTGGCTTAGTGCTCTCCGGAAGTGAGATTCCGAAAGAAACACTATCTCCTCCAGGAAATGGTT 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 GTGCTATCTATAGATCTGAAATCATCAGCACTGCTCCCTCATCCTGGGTGGTGCCCGGGCCAAGTCCTAACGAA 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 GAGAACAATGGCAAAAGCATGTCGCTGAAAAACAAGGCATTGGACTGGGCGATACCACAGCAGCGGAGTTCATC 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 ATGCCCGCGCATGGGCGGCACCGATGCTGTCATCACTAACGTTTCAGGGTCAGTGTCGAGTGCAGGCCGCCCAG 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 CCTCCGCATCACCCGCCCCCAATGCCAATGCAGATGGCACCAAAACCAGCAGGAGCTCTGTAGAAACCACACCA 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 TCCGTTATTCAGCACGTGGGCCAGCCCCCGGCCACTCCTGCCAAGCACAGTAGCAGCACCAGCAGCAAGGGCGC 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 CAAAGCCAGCAACCCAGAACCGAGTTTCAAAGCAAACGAGAACGGCCTTCCACCAAGCTCTATATTTCTGTCTC 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 CAAATGAGGCATTCAGGTCCCCACCAATTCCCTACCCCAGGAGTTACCTCCCTTACCCAGCCCCTGAGGGCATT 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 GCTGTAAGTCCCCTCTCCTTACATGGCAAAGGACCTGTCTACCCTCACCCAGTTTTGTTACCCAATGGCAGTCT 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 GTTTCCTGGGCACCTTGCCCCAAAGCCTGGGCTGCCCTATGGGCTTCCCACCGGCCGTCCAGAGTTTGTGACCT 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 ACCAAGATGCCCTGGGGTTGGGCATGGTGCATCCCATGTTGATACCACACACGCCCATAGAGATTACTAAAGAG 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 GAGAAACCAGAGAGGAGATCCCGGTCCCATGAGAGAGCCCGTTACGAGGACCCAACCCTCCGGAATCGGTTTTC 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 CGAGATTTTGGAAACTAGCAGCACCAAGTTACATCCAGATGTCCCCACCGACAAGAACCTAAAGCCGAACCCCA 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 ACTGGAATCAAGGGAAGACTGTTGTCAAAAGCGACAAGCTTGTCTACGTAGACCTTCTCCGAGAAGAACCAGAT 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 GCTAAAACTGACACAAACGTGTCCAAACCCAGCTTTGCAGCAGAGAGTGTTGGCCAGAGCGCTGAGCCCCCCAA 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 GCCCTCAGTTGAGCCGGCCCTGCAGCAGCACCGTGATTTCATCGCCCTGAGAGAGGAGTTGGGGCGCATCAGTG 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 ACTTCCACGAAACTTATACTTTCAAACAGCCAGTCTTCACCGTAAGCAAGGACAGTGTTCTGGCAGGTACCAAC 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 AAAGAGAACCTAGGGTTGCCAGTCTCGACTCCATTCCTGGAGCCACCTCTGGGGAGCGATGGCCCTGCTGTAAC 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 TTTTGGTAAAACCCAAGAGGATCCCAAACCATTTTGTGTGGGCAGTGCCCCACCAAGTGTGGATGTGACCCCCA 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 CCTATACCAAAGATGGAGCTGATGAGGCTGAATCAAATGATGGCAAAGTTCTGAAACCGAAGCCATCTAAGCTG 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 GCAAAGAGAATCGCCAACTCAGCGGGTTACGTGGGTGACCGATTCAAATGTGTCACTACCGAACTGTATGCAGA 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 TTCCAGTCAGCTCAGCCGGGAGCAACGGGCATTGCAGATGGAAGGATTACAAGAGGACAGTATTTTATGTCTAC 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 CCGCTGCTTACTGTGAGCGTGCAATGATGCGCTTCTCAGAGTTGGAGATGAAAGAAAGAGAAGGTGGCCACCCA 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 GCAACCAAAGACTCCGAGATGTGCAAATTCAGCCCAGCCGACTGGGAAAGGTTGAAAGGAAATCAGGACAAAAA 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 GCCAAAGTCGGTCACCCTGGAGGAGGCCATTGCAGAACAGAACGAAAGTGAGAGATGCGAGTATAGTGTTGGAA 3256
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3257 ACAAGCACCGTGATCCCTTTGAAGCCCCAGAGGACAAAGATCTTCCTGTGGAGAAGTACTTTGTGGAGAGGCAG 3330
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3331 CCTGTGAGCGAGCCTCCCGCAGACCAGGTGGCCTCGGACATGCCTCACAGCCCCACCCTCCGGGTGGACAGGAA 3404
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3405 ACGCAAAGTCTCAGGTGACAGCAGCCACACTGAGACCACTGCGGAGGAGGTGCCAGAGGACCCTCTGCTGAAAG 3478
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3479 CCAAACGCCGACGAGTCTCTAAAGATGACTGGCCTGAGAGGGAAATGACAAACAGTTCCTCTAACCACTTAGAA 3552
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3553 GACCCACATTATAGTGAGCTGACCAACCTGAAGGTGTGCATTGAATTAACAGGGCTCCATCCTAAAAAACAACG 3626
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3627 CCACTTGCTGCACCTTAGAGAACGATGGGAGCAGCAGGTGTCGGCAGCAGATGGCAAACCTGGCCGGCAAAGCA 3700
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3701 GGAAGGAAGTGACCCAGGCCACTCAGCCTGAGGCCATTCCTCAGGGGACTAACATCACTGAAGAGAAACCTGGC 3774
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3775 AGGAAAAGGGCAGAGGCCAAAGGCAACAGAAGCTGGTCGGAAGAGTCTCTTAAACCCAGTGACAATGAACAAGG 3848
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3849 CTTGCCTGTGTTCTCCGGCTCTCCGCCCATGAAGAGTCTTTCATCCACCAGTGCAGGCGGCAAAAAGCAGGCTC 3922
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3923 AGCCAAGCTGCGCACCAGCCTCCAGGCCGCCTGCCAAACAGCAGAAAATTAAAGAAAACCAGAAGACAGATGTG 3996
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3997 CTGTGTGCAGACGAAGAAGAGGATTGCCAGGCTGCCTCCCTGCTGCAGAAATACACCGACAACAGCGAGAAGCC 4070
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4071 ATCCGGGAAGAGACTGTGCAAAACCAAACACTTGATCCCTCAGGAGTCCAGGCGGGGATTGCCACTGACAGGGG 4144
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4145 AATACTACGTGGAGAATGCCGATGGCAAGGTGACTGTCCGGAGATTCAGAAAGCGGCCGGAGCCCAGTTCGGAC 4218
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4219 TATGATCTGTCACCAGCCAAGCAGGAGCCAAAGCCCTTCGACCGCTTGCAGCAACTGCTACCAGCCTCCCAGTC 4292
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4293 CACACAGCTGCCATGCTCAAGTTCCCCTCAGGAGACCACCCAGTCTCGCCCTATGCCGCCGGAAGCACGGAGAC 4366
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4367 TTATTGTCAATAAGAACGCTGGCGAGACCCTTCTGCAGCGGGCAGCCAGGCTTGGCTATGAGGAAGTGGTCCTG 4440
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4441 TACTGCTTAGAGAACAAGATTTGTGATGTAAATCATCGGGACAACGCAGGTTACTGCGCCCTGCATGAAGCTTG 4514
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4515 TGCTAGGGGCTGGCTCAACATTGTGCGACACCTCCTTGAATATGGCGCTGATGTCAACTGTAGTGCCCAGGATG 4588
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4589 GAACCAGGCCTCTGCACGATGCTGTTGAGAACGATCACTTGGAAATTGTCCGACTACTTCTCTCTTATGGTGCT 4662
Query 1 ------------------------------------------ATGACCCACAGTGAACTTATGGAAAAGTTCTT 32
||||||||||||||||||||||||||||||||
Sbjct 4663 GACCCCACCTTGGCTACGTACTCAGGTAGAACCATCATGAAAATGACCCACAGTGAACTTATGGAAAAGTTCTT 4736
Query 33 AACAGATTATTTAAATGACCTCCAGGGTCGCAATGATGATGACGCCAGTGGCACTTGGGACTTCTATGGCAGCT 106
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4737 AACAGATTATTTAAATGACCTCCAGGGTCGCAATGATGATGACGCCAGTGGCACTTGGGACTTCTATGGCAGCT 4810
Query 107 CTGTTTGTGAACCAGATGATGAAAGTGGCTATGATGTTTTAGCCAACCCCCCAGGACCAGAAGACCAGGATGAT 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4811 CTGTTTGTGAACCAGATGATGAAAGTGGCTATGATGTTTTAGCCAACCCCCCAGGACCAGAAGACCAGGATGAT 4884
Query 181 GATGACGATGCCTATAGCGATGTGTTTGAATTTGAATTTTCAGAGACCCCCCTCTTACCGTGTTATAACATCCA 254
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4885 GATGACGATGCCTATAGCGATGTGTTTGAATTTGAATTTTCAGAGACCCCCCTCTTACCGTGTTATAACATCCA 4958
Query 255 AGTATCTGTGGCTCAGGGGCCACGAAACTGGCTACTGCTTTCGGATGTCCTTAAGAAATTGAAAATGTCCTCCC 328
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4959 AGTATCTGTGGCTCAGGGGCCACGAAACTGGCTACTGCTTTCGGATGTCCTTAAGAAATTGAAAATGTCCTCCC 5032
Query 329 GCATATTTCGCTGCAATTTTCCAAACGTGGAAATTGTCACCATTGCAGAGGCAGAATTTTATCGGCAGGTTTCT 402
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5033 GCATATTTCGCTGCAATTTTCCAAACGTGGAAATTGTCACCATTGCAGAGGCAGAATTTTATCGGCAGGTTTCT 5106
Query 403 GCAAGTCTCTTGTTCTCTTGCTCCAAAGACCTGGAAGCCTTCAACCCTGAAAGTAAGGAGCTGTTAGATCTGGT 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5107 GCAAGTCTCTTGTTCTCTTGCTCCAAAGACCTGGAAGCCTTCAACCCTGAAAGTAAGGAGCTGTTAGATCTGGT 5180
Query 477 GGAATTCACGAACGAAATTCAGACTCTGCTGGGCTCCTCTGTAGAGTGGCTCCACCCCAGTGATCTGGCCTCAG 550
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5181 GGAATTCACGAACGAAATTCAGACTCTGCTGGGCTCCTCTGTAGAGTGGCTCCACCCCAGTGATCTGGCCTCAG 5254
Query 551 ACAACTACTGG 561
|||||||||||
Sbjct 5255 ACAACTACTGG 5265
