Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_12102
- Subject:
- NM_017745.6
- Aligned Length:
- 5163
- Identities:
- 561
- Gaps:
- 4602
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGCTCTCAGCAACCCCCCTGTATGGGAACGTTCACAGCTGGATGAACAGCGAGAGGGTCCGCATGTGTGGGGC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GAGCGAAGACAGGAAAATCCTTGTAAATGATGGTGACGCTTCAAAAGCCAGACTGGAACTGAGGGAAGAGAATC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCTTGAACCACAACGTGGTGGATGCGAGCACGGCCCATAGGATCGATGGCCTGGCAGCACTGAGCATGGACCGC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 ACTGGCCTGATCCGGGAAGGGCTGCGGGTCCCGGGAAACATCGTCTATTCTAGCTTGTGTGGACTGGGCTCAGA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GAAAGGTCGGGAGGCTGCCACAAGCACTCTAGGTGGCCTTGGGTTTTCTTCGGAAAGAAATCCAGAGATGCAGT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TCAAACCGAATACACCCGAGACAGTGGAGGCTTCTGCCGTCTCTGGAAAACCCCCAAATGGCTTCAGTGCTATA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TACAAAACACCGCCTGGAATACAAAAAAGTGCTGTAGCCACAGCAGAAGCGCTGGGCTTGGACAGGCCTGCCAG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CGACAAACAGAGCCCTCTCAACATCAATGGTGCTAGTTATCTGCGGCTGCCCTGGGTCAATCCTTACATGGAGG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GTGCCACGCCAGCCATCTACCCTTTCCTCGACTCGCCAAATAAGTATTCACTGAACATGTACAAGGCCTTGCTA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CCTCAGCAGTCCTACAGCTTGGCCCAGCCGCTGTATTCTCCAGTCTGCACCAATGGGGAGCGCTTTCTCTACCT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GCCGCCACCTCACTACGTCGGTCCCCACATCCCATCGTCCTTGGCATCACCCATGAGGCTCTCGACACCTTCGG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CCTCCCCAGCCATCCCGCCTCTCGTCCATTGCGCAGACAAAAGCCTCCCGTGGAAGATGGGCGTCAGCCCTGGG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 AATCCTGTTGATTCCCACGCCTATCCTCACATCCAGAACAGTAAGCAGCCCAGGGTTCCCTCTGCCAAGGCGGT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CACCAGTGGCCTGCCGGGGGACACAGCTCTCCTGTTGCCCCCCTCGCCTCGGCCGTCACCCCGAGTCCACCTTC 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CCACCCAGCCTGCTGCAGACACCTACTCGGAGTTCCACAAGCACTATGCCAGGATCTCCACCTCTCCTTCAGTT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GCCCTGTCAAAGCCATACATGACAGTTAGCAGCGAGTTCCCCGCGGCCAGGCTCTCCAATGGCAAGTATCCCAA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 GGCTCCGGAAGGGGGCGAAGGTGCCCAGCCAGTGCCCGGGCATGCCCGGAAGACAGCGGTTCAAGACAGAAAAG 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 ATGGCAGCTCACCTCCTCTGTTGGAGAAGCAGACCGTTACCAAAGACGTCACAGATAAGCCACTAGACTTGTCT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 TCTAAAGTGGTGGATGTAGATGCTTCCAAAGCTGACCACATGAAAAAGATGGCTCCCACGGTCCTGGTTCACAG 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 CAGGGCTGGAAGTGGCTTAGTGCTCTCCGGAAGTGAGATTCCGAAAGAAACACTATCTCCTCCAGGAAATGGTT 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 GTGCTATCTATAGATCTGAAATCATCAGCACTGCTCCCTCATCCTGGGTGGTGCCCGGGCCAAGTCCTAACGAA 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 GAGAACAATGGCAAAAGCATGTCGCTGAAAAACAAGGCATTGGACTGGGCGATACCACAGCAGCGGAGTTCATC 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 ATGCCCGCGCATGGGCGGCACCGATGCTGTCATCACTAACGTTTCAGGGTCAGTGTCGAGTGCAGGCCGCCCAG 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 CCTCCGCATCACCCGCCCCCAATGCCAATGCAGATGGCACCAAAACCAGCAGGAGCTCTGTAGAAACCACACCA 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 TCCGTTATTCAGCACGTGGGCCAGCCCCCGGCCACTCCTGCCAAGCACAGTAGCAGCACCAGCAGCAAGGGCGC 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 CAAAGCCAGCAACCCAGAACCGAGTTTCAAAGCAAACGAGAACGGCCTTCCACCAAGCTCTATATTTCTGTCTC 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 CAAATGAGGCATTCAGGTCCCCACCAATTCCCTACCCCAGGAGTTACCTCCCTTACCCAGCCCCTGAGGGCATT 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 GCTGTAAGTCCCCTCTCCTTACATGGCAAAGGACCTGTCTACCCTCACCCAGTTTTGTTACCCAATGGCAGTCT 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 GTTTCCTGGGCACCTTGCCCCAAAGCCTGGGCTGCCCTATGGGCTTCCCACCGGCCGTCCAGAGTTTGTGACCT 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 ACCAAGATGCCCTGGGGTTGGGCATGGTGCATCCCATGTTGATACCACACACGCCCATAGAGATTACTAAAGAG 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 GAGAAACCAGAGAGGAGATCCCGGTCCCATGAGAGAGCCCGTTACGAGGACCCAACCCTCCGGAATCGGTTTTC 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 CGAGATTTTGGAAACTAGCAGCACCAAGTTACATCCAGATGTCCCCACCGACAAGAACCTAAAGCCGAACCCCA 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 ACTGGAATCAAGGGAAGACTGTTGTCAAAAGCGACAAGCTTGTCTACGTAGACCTTCTCCGAGAAGAACCAGAT 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 GCTAAAACTGACACAAACGTGTCCAAACCCAGCTTTGCAGCAGAGAGTGTTGGCCAGAGCGCTGAGCCCCCCAA 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 GCCCTCAGTTGAGCCGGCCCTGCAGCAGCACCGTGATTTCATCGCCCTGAGAGAGGAGTTGGGGCGCATCAGTG 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 ACTTCCACGAAACTTATACTTTCAAACAGCCAGTCTTCACCGTAAGCAAGGACAGTGTTCTGGCAGGTACCAAC 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 AAAGAGAACCTAGGGTTGCCAGTCTCGACTCCATTCCTGGAGCCACCTCTGGGGAGCGATGGCCCTGCTGTAAC 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 TTTTGGTAAAACCCAAGAGGATCCCAAACCATTTTGTGTGGGCAGTGCCCCACCAAGTGTGGATGTGACCCCCA 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 CCTATACCAAAGATGGAGCTGATGAGGCTGAATCAAATGATGGCAAAGTTCTGAAACCGAAGCCATCTAAGCTG 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 GCAAAGAGAATCGCCAACTCAGCGGGTTACGTGGGTGACCGATTCAAATGTGTCACTACCGAACTGTATGCAGA 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 TTCCAGTCAGCTCAGCCGGGAGCAACGGGCATTGCAGATGGAAGGATTACAAGAGGACAGTATTTTATGTCTAC 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 CCGCTGCTTACTGTGAGCGTGCAATGATGCGCTTCTCAGAGTTGGAGATGAAAGAAAGAGAAGGTGGCCACCCA 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 GCAACCAAAGACTCCGAGATGTGCAAATTCAGCCCAGCCGACTGGGAAAGGTTGAAAGGAAATCAGGACAAAAA 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 GCCAAAGTCGGTCACCCTGGAGGAGGCCATTGCAGAACAGAACGAAAGTGAGAGATGCGAGTATAGTGTTGGAA 3256
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3257 ACAAGCACCGTGATCCCTTTGAAGCCCCAGAGGACAAAGATCTTCCTGTGGAGAAGTACTTTGTGGAGAGGCAG 3330
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3331 CCTGTGAGCGAGCCTCCCGCAGACCAGGTGGCCTCGGACATGCCTCACAGCCCCACCCTCCGGGTGGACAGGAA 3404
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3405 ACGCAAAGTCTCAGGTGACAGCAGCCACACTGAGACCACTGCGGAGGAGGTGCCAGAGGACCCTCTGCTGAAAG 3478
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3479 CCAAACGCCGACGAGTCTCTAAAGGGCTCCATCCTAAAAAACAACGCCACTTGCTGCACCTTAGAGAACGATGG 3552
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3553 GAGCAGCAGGTGTCGGCAGCAGATGGCAAACCTGGCCGGCAAAGCAGGAAGGAAGTGACCCAGGCCACTCAGCC 3626
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3627 TGAGGCCATTCCTCAGGGGACTAACATCACTGAAGAGAAACCTGGCAGGAAAAGGGCAGAGGCCAAAGGCAACA 3700
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3701 GAAGCTGGTCGGAAGAGTCTCTTAAACCCAGTGACAATGAACAAGGCTTGCCTGTGTTCTCCGGCTCTCCGCCC 3774
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3775 ATGAAGAGTCTTTCATCCACCAGTGCAGGCGGCAAAAAGCAGGCTCAGCCAAGCTGCGCACCAGCCTCCAGGCC 3848
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3849 GCCTGCCAAACAGCAGAAAATTAAAGAAAACCAGAAGACAGATGTGCTGTGTGCAGACGAAGAAGAGGATTGCC 3922
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3923 AGGCTGCCTCCCTGCTGCAGAAATACACCGACAACAGCGAGAAGCCATCCGGGAAGAGACTGTGCAAAACCAAA 3996
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3997 CACTTGATCCCTCAGGAGTCCAGGCGGGGATTGCCACTGACAGGGGAATACTACGTGGAGAATGCCGATGGCAA 4070
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4071 GGTGACTGTCCGGAGATTCAGAAAGCGGCCGGAGCCCAGTTCGGACTATGATCTGTCACCAGCCAAGCAGGAGC 4144
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4145 CAAAGCCCTTCGACCGCTTGCAGCAACTGCTACCAGCCTCCCAGTCCACACAGCTGCCATGCTCAAGTTCCCCT 4218
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4219 CAGGAGACCACCCAGTCTCGCCCTATGCCGCCGGAAGCACGGAGACTTATTGTCAATAAGAACGCTGGCGAGAC 4292
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4293 CCTTCTGCAGCGGGCAGCCAGGCTTGGCTATGAGGAAGTGGTCCTGTACTGCTTAGAGAACAAGATTTGTGATG 4366
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4367 TAAATCATCGGGACAACGCAGGTTACTGCGCCCTGCATGAAGCTTGTGCTAGGGGCTGGCTCAACATTGTGCGA 4440
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4441 CACCTCCTTGAATATGGCGCTGATGTCAACTGTAGTGCCCAGGATGGAACCAGGCCTCTGCACGATGCTGTTGA 4514
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4515 GAACGATCACTTGGAAATTGTCCGACTACTTCTCTCTTATGGTGCTGACCCCACCTTGGCTACGTACTCAGGTA 4588
Query 1 --------------ATGACCCACAGTGAACTTATGGAAAAGTTCTTAACAGATTATTTAAATGACCTCCAGGGT 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4589 GAACCATCATGAAAATGACCCACAGTGAACTTATGGAAAAGTTCTTAACAGATTATTTAAATGACCTCCAGGGT 4662
Query 61 CGCAATGATGATGACGCCAGTGGCACTTGGGACTTCTATGGCAGCTCTGTTTGTGAACCAGATGATGAAAGTGG 134
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4663 CGCAATGATGATGACGCCAGTGGCACTTGGGACTTCTATGGCAGCTCTGTTTGTGAACCAGATGATGAAAGTGG 4736
Query 135 CTATGATGTTTTAGCCAACCCCCCAGGACCAGAAGACCAGGATGATGATGACGATGCCTATAGCGATGTGTTTG 208
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4737 CTATGATGTTTTAGCCAACCCCCCAGGACCAGAAGACCAGGATGATGATGACGATGCCTATAGCGATGTGTTTG 4810
Query 209 AATTTGAATTTTCAGAGACCCCCCTCTTACCGTGTTATAACATCCAAGTATCTGTGGCTCAGGGGCCACGAAAC 282
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4811 AATTTGAATTTTCAGAGACCCCCCTCTTACCGTGTTATAACATCCAAGTATCTGTGGCTCAGGGGCCACGAAAC 4884
Query 283 TGGCTACTGCTTTCGGATGTCCTTAAGAAATTGAAAATGTCCTCCCGCATATTTCGCTGCAATTTTCCAAACGT 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4885 TGGCTACTGCTTTCGGATGTCCTTAAGAAATTGAAAATGTCCTCCCGCATATTTCGCTGCAATTTTCCAAACGT 4958
Query 357 GGAAATTGTCACCATTGCAGAGGCAGAATTTTATCGGCAGGTTTCTGCAAGTCTCTTGTTCTCTTGCTCCAAAG 430
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4959 GGAAATTGTCACCATTGCAGAGGCAGAATTTTATCGGCAGGTTTCTGCAAGTCTCTTGTTCTCTTGCTCCAAAG 5032
Query 431 ACCTGGAAGCCTTCAACCCTGAAAGTAAGGAGCTGTTAGATCTGGTGGAATTCACGAACGAAATTCAGACTCTG 504
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5033 ACCTGGAAGCCTTCAACCCTGAAAGTAAGGAGCTGTTAGATCTGGTGGAATTCACGAACGAAATTCAGACTCTG 5106
Query 505 CTGGGCTCCTCTGTAGAGTGGCTCCACCCCAGTGATCTGGCCTCAGACAACTACTGG 561
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5107 CTGGGCTCCTCTGTAGAGTGGCTCCACCCCAGTGATCTGGCCTCAGACAACTACTGG 5163
