Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_12102
Subject:
NM_175045.3
Aligned Length:
5177
Identities:
488
Gaps:
4618

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGCTTTCTGCAACCCCTCTGTATGGGAACGTTCACAGCTGGATGAACAGCGAGAGGGTCCGCATGTGTGGAAC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  AAGTGAAGACAGGAAAATTCCTGTGAATGATGGCGACGCTTCAAAAGCCAGGCTGGAGCTGAGGGAGGAGACTC  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  CCCTGAGTCACAGCGTGGTGGATACCAGTGGAGCCCATCGGATCGATGGCCTGGCAGCACTGAGCATGGACCGC  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  ACAGGCCTCATCCGGGAAGGGCTCCGGGTCCCTGGAAACATCGTTTATTCTGGCTTGTGTGGATTGGGCTCAGA  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  AAAAGGTCGGGAGGCTACCCCAAGCTCTCTCAGTGGCCTTGGGTTTTCTTCGGAAAGAAATCCAGAGATGCAAT  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  TCAAACCGAATACTCCCGAGACAGTGGAGGCTTCTGCTGTCTCTGGAAAACCCCCAAATGGCTTCAGTGCTATA  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  TACAAAACACCGCCTGGGATACAAAAGAGCGCTGTAGCTACAGCGGAAAGCTTGGGTTTGGATAGGCCTGCCAG  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  TGACAAACAGAGCCCTCTCAACATCAATGGTGCTAGTTACCTGCGGCTGCCCTGGGTCAACCCTTACATGGAGG  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  GGGCCACTCCAGCCATATACCCTTTCCTCGACTCGCCAAATAAGTATTCACTGAATATGTACAAGGCCTTGCTA  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  CCTCAGCAGTCCTACGGCTTGGCCCAGCCACTGTATTCTCCTGTCTGCACCAGTGGGGAACGCTTCCTCTACCT  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  GCCACCCCCACACTATGTCAACCCTCACATCCCCTCCTCCTTGGCTTCACCCATGAGGCTCTCCACACCTTCAG  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  CCTCTGCGGCCATTCCACCTCTCGTCCACTGCTCAGACAAAAGCCTCCCATGGAAGATGGGCGTCAACCCTGGG  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  AACCCAGTAGATTCCCACAGTTACCCCCACATCCAAAACAGTAAACAGCCCCGGGTGACCTCTGCCAAGGCAGT  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  CAATAGTGGCCTGCCAGGGGACACAGCTCTCCTGTTGCCTCCTTCACCTCGGCCCTCAGCCCGGGTCCACCTTC  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  CAACTCAGCCCGCTGCAGAGACCTACTCCGAGTTCCACAAGCACTATCCCAGGATCTCCACCTCTCCCTCAGTC  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  ACCCTGACGAAGCCATACATGACAGCCAATAGCGAGTTCTCTACATCCAGGCTGTCCAATGGCAAGTACCCCAA  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  GGCTCTAGATGGGGGCGACTGTGCTCAATCCATGCCTGGGCACACCCGGAAGACAACGGTTCAAGACAGAAAAG  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  ATGGGGGCTCACCACCTCTGTTGGAAAAGCAGACCGTTACCAAAGATGTCACAGACAAACCACTTGACCTGTCT  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  TCTAAAGTGGTGGATGCGGACGCTTCCAAAGGTGACCACATGAAAAAGATGGCTCCCACAGTCCTGGTTCACAG  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  TCGGGCTGCAAGTGGCTTAGTGCTCTCTGGAAGTGAGATTCCGAAAGAAACACTATCTCCTCCAGGAAATGGAT  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  GTTCTATCTATAGATCAGAGATCATCAGCACTGCTCCCTCATCCTGGGTGGTGCCAGGGCCAAGTCCTAATGAA  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  GAGAACAATGGCAAAAGTCTGTCACTGAAAAACAAGGCTTTGGACTGGGCAATACCGCAACAGCGGAGTTCCTC  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  GTGTCCCCGCATGGGTGGCACAGATGCCGTGGTCACTAATGTTTCAGGGTCCGTGTCCAGCTCAGGACGCCCAG  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  CCTCTGCATCACCAGCCCCCAACGCCAACGCCAATGCAGATGGCACCAAGACCAGCAGGAGCTCGGTGGATACC  1776

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1777  ACGCCATCAGTCATCCAGCATGTGGGCCAGCCCTCATCCACGCCTGCCAAGCACGGTGGCAGCACCAGCAGCAA  1850

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1851  GGGAGCCAAAGCCAACCCAGAACCGAGCTTCAAAGCGAGTGAGAATGGCCTCCCGCCAACCTCAATATTTCTAT  1924

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1925  CTCCAAATGAAGCATTCAGGTCCCCAGCAATTCCCTACCCTAGGAGTTACCTCCCTTACGCAGCACCAGAAGGC  1998

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1999  ATCGCTCTAAGTCCCCTCTCTTTACATGGCAAAGGACCTGTGTATCCTCACCCAGTTTTGTTACCCAATGGCAG  2072

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2073  TCTGTTTCCTGGGCACCTTGCCCCAAAGCCTGGCCTGCCTTACGGGCTGCATACGAGCAGGCCAGAATTTGTGA  2146

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2147  CCTACCAAGATGCCCTGGGCCTGGGCATGGTCCATCCCATGTTGATCCCACACACGCCCATTGAGATCACAAAA  2220

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2221  GAGGAGAAGCCGGAGAGACGCTCCCGCTCCCATGAGAGAGCCCGTTATGAGGACCCAACCCTCCGTAGCCGGTT  2294

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2295  TTCTGAGATGTTGGAAGCTAGCAGCACCAAACTGCATCCAGAAGTCCCCACTGACAAGAACCTGAAGCCAAACT  2368

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2369  CTAGCTGGAATCAAGGGAAGACTGGGGTCAAAAGCGACAAACTGGTCTACGTAGACCTTCTCCGAGAAGAAGCA  2442

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2443  GACACTAAAACTGATGCAGGGGCACCCAAAGCAGGCCTTGTAGCCGAGAATGTAGGTCAGGACACCGAGGCCAC  2516

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2517  CAAGCCCTCAGCTGACCCTGTGATCCAACAACGCCGTGAATTCATCTCCCTCAGAGAGGAGCTGGGCCGAATCA  2590

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2591  CTGACTTCCATGAATCTTTCACTTTCAAACAGGCCTCAAGCCAGCCAGTGTTCAGCTTAGGCAAGGATAGTGGT  2664

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2665  GCAGCAGGAACCAACAAAGAGAACCTGGGTGTGCAGGTAGCAACTCCATTCTTGGAGACAGCTCTGGGCAGTGA  2738

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2739  GGGCCCTGCTGTGACTTTTGGTAAAACCCAAGAGGATCCCAAACCATTTTGTGTGGGCGGTGCCCCTCCAAACA  2812

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2813  TGGATGTCACCCCCGCCTATACCAAAGAAGGAACTGATGAGGCCGAATCCAACGATGGCAAAGTTCTGAAACCC  2886

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2887  AAGCCATCCAAGCTGGCAAAGAGAATTGCTAACTCGGCAGGTTATGTGGGCGACCGATTCAAGTGTGTCACCAC  2960

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2961  CGAACTGTATGCAGATTCCAGTCAGCTCAGCCGAGAGCAGCGGGCATTGCAGATGGAAGGATTACAAGAGGACA  3034

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3035  GTATTTTATGTCTACCCGCTGCTTACTGTGAGCGTGCAATGATGCGCTTCTCAGAGTTGGAGATGAAAGAGAGA  3108

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3109  GAAGGTAGCCACCCAGCAACCAAAGACTCCGAGGTGTGCAAATTCAGCCCAGCCGACTGGGAAAGGTTGAAAGG  3182

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3183  AAATCAGGAAAAGAAGCCAAAGTCAGTCACCCTGGAAGAGGCCATTGCCGACCAGAATGACAGTGAGAGATGTG  3256

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3257  AGTATAGCACTGGAAACAAACATGATCTCTTTGAAGCCCCAGAGGACAAAGATCTTCCTGTGGAAAAGTATTTC  3330

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3331  TTGGAGAGGCCACCTGTGAGTGAGCCACCCAGTGACCAGGGGGTGGTGGACACGCCACACAGCCCCACCCTCCG  3404

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3405  GCTAGACAGGAAACGCAAACTGTCAGGTGACAGCACCCACACTGAGACCGCTGTGGAAGAGCTAGCTGAGGACC  3478

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3479  CTCTGAAAGCCAAGCGAAGACGGATCTCCAAAGGGCTCCATCCTAAAAAGCAACGCCACTTGCTGCACCTTAGA  3552

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3553  GAACGGTGGGAGCAGCAGGTGTCGGCAGCCGAGAGCAAACCTGGCCGGCAAAGCAGGAAGGAAGTGGCCCAGGC  3626

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3627  TGTTCAGCCTGAGGTCACCTCCCAGGGGACTAACATCACTGAAGAGAAGCCTGGCAGGAAAAAGGCAGAGGCCA  3700

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3701  AAGGCAACAGAGGCTGGTCTGAAGAGTCGCTCAAATCCTGTGACAATGAGCAAGGCTTGCCTGTGCTCTCAGGC  3774

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3775  TCTCCGCCCATGAAGAGCCTTTCATCCACCAATGCAAGTGGCAAAAAGCAGACTCAGCCAAGCTGCACGCCAGC  3848

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3849  CTCAAGGCTGCCTGCCAAACAGCAGAAAATTAAAGAAAGCCAGAAGACAGATGTGCTGTGCACAGGGGAAGACG  3922

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3923  AGGATTGCCAGGCTGCCTCCCCGCTGCAAAAATACACAGACAACATCGAGAAGCCATCCGGGAAGAGACTGTGC  3996

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3997  AAAACCAAGCACTTGATACCTCAGGAGTCCAGGAGGAGCTTGCAGATCACAGGCGACTACTATGTGGAGAACAC  4070

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 4071  TGACACTAAGATGACTGTGCGGAGATTCAGAAAACGACCTGAGCCCAGTTCGGACTACGATTTGTCACCACCAG  4144

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 4145  CCAAGCAGGAGCCAAAGCCCTTTGACCGTCTACAACAATTGCTACCGGCCACCCAGGCCACCCAGCTGCCACGC  4218

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 4219  TCAAATTCTCCTCAAGAGACCACCCAGTCTCGCCCCATGCCGCCAGAAGCTCGGAGACTTATTGTCAATAAGAA  4292

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 4293  TGCTGGCGAGACCCTCCTGCAGCGGGCTGCCCGGCTAGGCTATGAGGAAGTGGTCTTATATTGCCTGGAGAACA  4366

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 4367  AGGTCTGTGATGTCAATCATCGAGACAATGCTGGCTACTGTGCTCTGCATGAAGCTTGCGCCAGGGGATGGCTC  4440

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 4441  AACATCGTGCGCCACCTCCTTGAATATGGCGCTGATGTCAACTGCAGTGCCCAGGATGGAACCAGGCCTCTGCA  4514

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 4515  TGATGCTGTGGAGAATGACCACTTAGAAATTGTACGATTGCTTCTTTCCTATGGTGCTGACCCTACTTTGGCCA  4588

Query    1  --------------------------ATGACCCACAGTGAACTTATGGAAAAGTTCTTAACAGATTATTTAAAT  48
                                      |||||||||||||||||||||||.|||||.||||||||.|||||||||
Sbjct 4589  CATACTCAGGGAGAACCATCATGAAAATGACCCACAGTGAACTTATGGAGAAGTTTTTAACAGACTATTTAAAT  4662

Query   49  GACCTCCAGGGTCGCAATGATGATGACGCCAGTGGCACTTGGGACTTCTATGGCAGCTCTGTTTGTGAACCAGA  122
            |||||.||||||||||.|||.||||||.||||.|||.|||||||.|||||||||||||||||.|||||||||||
Sbjct 4663  GACCTGCAGGGTCGCAGTGAAGATGACACCAGCGGCGCTTGGGAGTTCTATGGCAGCTCTGTGTGTGAACCAGA  4736

Query  123  TGATGAAAGTGGCTATGATGTTTTAGCCAACCCCCCAGGACCAGAAGACCAGGATGATGATGACGATGCCTATA  196
            |||.||||||||.||.||||||||.||.||.|||||||||||||||||||..|||||.||.||.|||.||||||
Sbjct 4737  TGACGAAAGTGGGTACGATGTTTTGGCTAATCCCCCAGGACCAGAAGACCCAGATGAGGAAGAGGATACCTATA  4810

Query  197  GCGATGTGTTTGAATTTGAATTTTCAGAGACCCCCCTCTTACCGTGTTATAACATCCAAGTATCTGTGGCTCAG  270
            |||||.|||||||.|||||.|||.|.||.|.|.|||||||.||||||||||||||||||||.|||||.||||||
Sbjct 4811  GCGATTTGTTTGAGTTTGAGTTTGCTGAAAGCTCCCTCTTGCCGTGTTATAACATCCAAGTGTCTGTCGCTCAG  4884

Query  271  GGGCCACGAAACTGGCTACTGCTTTCGGATGTCCTTAAGAAATTGAAAATGTCCTCCCGCATATTTCGCTGCAA  344
            |||||||||||||||||.|||||.||.||.||.||.|||||.|||||||||||||||||.|||||.||..||||
Sbjct 4885  GGGCCACGAAACTGGCTTCTGCTCTCAGACGTGCTCAAGAAGTTGAAAATGTCCTCCCGGATATTCCGTAGCAA  4958

Query  345  TTTTCCAAACGTGGAAATTGTCACCATTGCAGAGGCAGAATTTTATCGGCAGGTTTCTGCAAGTCTCTTGTTCT  418
            ||||||.||..|||||||||||||||||||||||||.||.|||||.||.|||||.||..|||||||||||||||
Sbjct 4959  TTTTCCCAATCTGGAAATTGTCACCATTGCAGAGGCGGAGTTTTACCGACAGGTCTCAACAAGTCTCTTGTTCT  5032

Query  419  CTTGCTCCAAAGACCTGGAAGCCTTCAACCCTGAAAGTAAGGAGCTGTTAGATCTGGTGGAATTCACGAACGAA  492
            |.|||.||||||||||||||||||||||.||||||||.|||||||||||.|||||||||||||||||.||.||.
Sbjct 5033  CCTGCCCCAAAGACCTGGAAGCCTTCAATCCTGAAAGCAAGGAGCTGTTGGATCTGGTGGAATTCACCAATGAG  5106

Query  493  ATTCAGACTCTGCTGGGCTCCTCTGTAGAGTGGCTCCACCCCAGTGA-TCTGGCCTCA-GACAACTACTGG  561
            .|.|||||.|||||||||||||||||.||||||||||||||.||||| .|.|||  || ||.|||||||||
Sbjct 5107  CTCCAGACACTGCTGGGCTCCTCTGTGGAGTGGCTCCACCCTAGTGACACGGGC--CATGAAAACTACTGG  5175

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