Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_12159
- Subject:
- XR_950811.2
- Aligned Length:
- 3360
- Identities:
- 344
- Gaps:
- 3015
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GGGAGCCACCGCCGCGCCGCCGTTTGGGCCGGGAAGCGATGTAGTAGCTGCCAGGCTGTCCCCCGCCCTGCCCG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GCCCGAGCCCCGCGGGCCGCCGCCGCCACCGCCGCCATGAAGAAGCAGTTCAACCGCATGAAGCAGCTGGCTAA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCAGACCGTGGGCAGAGCTGAGAAAACAGAAGTCCTTAGTGAAGATCTATTACAGATTGAGAGACGCCTGGACA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CGGTGCGGTCAATATGCCACCATTCCCATAAGCGCTTGGTGGCATGTTTCCAGGGCCAGCATGGCACCGATGCC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GAGAGGAGACACAAAAAACTGCCTCTGACAGCTCTTGCTCAAAATATGCAAGAAGCATCGACTCAGCTGGAAGA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CTCTCTCCTGGGGAAGATGCTGGAGACGTGTGGAGATGCTGAGAATCAGCTGGCTCTCGAGCTCTCCCAGCACG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 AAGTCTTTGTTGAGAAGGAGATCGTGGACCCTCTGTACGGCATAGCTGAGGTGGAGATTCCCAACATCCAGAAG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CAGAGGAAGCAGCTTGCAAGATTGGTGTTAGACTGGGATTCAGTCAGAGCCAGGTGGAACCAAGCTCACAAATC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CTCAGGAACCAACTTTCAGGGGCTTCCATCAAAAATAGATACTCTAAAGGAAGAGATGGATGAAGCTGGAAATA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 AAGTAGAACAGTGCAAGGATCAACTTGCAGCAGACATGTACAACTTTATGGCCAAAGAAGGGGAGTATGGCAAA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TTCTTTGTTACGTTATTAGAAGCCCAAGCAGATTACCATAGAAAAGCATTAGCAGTCTTAGAAAAGACCCTCCC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CGAAATGCGAGCCCATCAAGATAAGTGGGCGGAAAAACCAGCCTTTGGGACTCCCCTAGAAGAACACCTGAAGA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GGAGCGGGCGCGAGATTGCGCTGCCCATTGAAGCCTGTGTCATGCTGCTTCTGGAGACAGGCATGAAGGAGGAG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GGCCTTTTCCGAATTGGGGCTGGGGCCTCCAAGTTAAAGAAGCTGAAAGCTGCTTTGGACTGTTCTACTTCTCA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CCTGGATGAGTTCTATTCAGACCCCCATGCTGTAGCAGGTGCTTTAAAATCCTATTTACGGGAATTGCCTGAAC 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 CTTTGATGACTTTTAATCTGTATGAAGAATGGACACAAGTTGCAAGTGTGCAGGATCAAGACAAAAAACTTCAA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 GACTTGTGGAGAACATGTCAGAAGTTGCCACCACAAAATTTTGTTAACTTTAGATATTTGATCAAGTTCCTTGC 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 AAAGCTTGCTCAGACCAGCGATGTGAATAAAATGACTCCCAGCAACATTGCGATTGTGTTAGGCCCTAACTTGT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 TATGGGCCAGAAATGAAGGAACACTTGCTGAAATGGCAGCAGCCACATCCGTCCATGTGGTTGCAGTGATTGAA 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 CCCATCATTCAGCATGCCGACTGGTTCTTCCCTGAAGAGGTGGAATTTAATGTATCAGAAGCATTTGTACCTCT 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 CACCACCCCGAGTTCTAATCACTCATTCCACACTGGAAACGACTCTGACTCGGGGACCCTGGAGAGGAAGCGGC 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 CTGCTAGCATGGCGGTGATGGAAGGAGACTTGGTGAAGAAGGAAAGTCCTCCCAAACCGAAGGACCCTGTATCT 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 GCAGCTGTGCCAGCACCAGGGAGAAACAACAGTCAGATAGCATCTGGCCAAAATCAGCCCCAGGCAGCTGCTGG 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 CTCCCACCAGCTCTCCATGGGCCAACCTCACAATGCTGCAGGGCCCAGCCCGCATACACTGCGCCGAGCTGTTA 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 AAAAACCCGCTCCAGCACCCCCGAAACCGGGCAACCCACCTCCTGGCCACCCCGGGGGCCAGAGTTCTTCAGGA 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 ACATCTCAGCATCCACCCAGTCTGTCACCAAAGCCACCCACCCGAAGCCCCTCTCCTCCCACCCAGCACACGGG 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 CCAGCCTCCAGGCCAGCCCTCCGCCCCCTCCCAGCTCTCAGCACCCCGGAGGTACTCCAGCAGCTTGTCTCCAA 1998
Query 1 -----------------------------------------------------ATGCACACCAAACCCAATAGC 21
|||||||||||||||||||||
Sbjct 1999 TCCAAGCTCCCAATCACCCACCGCCGCAGCCCCCTACGCAGGCCACGCCACTGATGCACACCAAACCCAATAGC 2072
Query 22 CAGGGCCCTCCCAACCCCATGGCATTGCCCAGTGAGCATGGACTTGAGCAGCCATCTCACACCCCTCCCCAGAC 95
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2073 CAGGGCCCTCCCAACCCCATGGCATTGCCCAGTGAGCATGGACTTGAGCAGCCATCTCACACCCCTCCCCAGAC 2146
Query 96 TCCAACGCCCCCCAGTACTCCGCCCCTAGGAAAACAGAACCCCAGTCTGCCAGCTCCTCAGACCCTGGCAGGGG 169
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2147 TCCAACGCCCCCCAGTACTCCGCCCCTAGGAAAACAGAACCCCAGTCTGCCAGCTCCTCAGACCCTGGCAGGGG 2220
Query 170 GTAACCCTGAAACTGCACAGCCACATGCTGGAACCTTACCGAGACCGAGACCAGTACCAAAGCCAAGGAACCGG 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2221 GTAACCCTGAAACTGCACAGCCACATGCTGGAACCTTACCGAGACCGAGACCAGTACCAAAGCCAAGGAACCGG 2294
Query 244 CCCAGCGTGCCCCCACCCCCCCAACCTCCTGGTGTCCACTCAGCTGGGGACAGCAGCCTCACCAACACAGCACC 317
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2295 CCCAGCGTGCCCCCACCCCCCCAACCTCCTGGTGTCCACTCAGCTGGGGACAGCAGCCTCACCAACACAGCACC 2368
Query 318 AACAGCTTCCAAGATAGTTACAGATG-------TA--------------------------------------- 345
||||||||||||||||||.||||||| ||
Sbjct 2369 AACAGCTTCCAAGATAGTAACAGATGCCCTTCCTAGTGCCCTCACAGGTGGGGAAGGTTTCCAGGACTAAGATG 2442
Query 346 -------------------------------------------------------------------------- 345
Sbjct 2443 TATGACCTGCCATATTCAGTAAGAACTGAGATTGGAATATTTAATGACTCCAATTCCAGGGTTTCAGAACCGCA 2516
Query 346 -------------------------------------------------------------------------- 345
Sbjct 2517 TCGCAGCATCTTTCCTGAAATGCACTCAGACTCAGCCAGCAAAGACGTGCCTGGCCGCATCCTGCTGGATATAG 2590
Query 346 -------------------------------------------------------------------------- 345
Sbjct 2591 ACAATGATACCGAGAGCACTGCCCTGTGAAGAAAGCCCTTTCCCAGCCCTCCACCACTTCCACCCTGGCGAGTG 2664
Query 346 -------------------------------------------------------------------------- 345
Sbjct 2665 GAGCAGGGGCAGGCGAACCTCTTTCTTTGCAGACCGAACAGTGAAAAGCTTTCAGTGGAGGACAAAGGAGGGCC 2738
Query 346 -------------------------------------------------------------------------- 345
Sbjct 2739 TCACTGTGCGGGACCTGGCCTTCTGCACGGCCCAAGGAGAACCTGGAGGCCACCACTAAAGCTGAATGACCTGT 2812
Query 346 -------------------------------------------------------------------------- 345
Sbjct 2813 GTCTTGAAGAAGTTGGCTTTCTTTACATGGGAAGGAAATCATGCCAAAAAAATCCAAAACAAAGAAGTACCTGG 2886
Query 346 -------------------------------------------------------------------------- 345
Sbjct 2887 AGTGGAGAGAGTATTCCTGCTGAAACGCGCATAGGAAGCTTTTGTCCCTGCTGTTAATGCGGGCAGCACCTACA 2960
Query 346 -------------------------------------------------------------------------- 345
Sbjct 2961 GCAACTTGGAATGAGTAAGAAGCAGTGCGTTAACTATCTATTTAATAAAATGCGCTCATTATGCAAGTCGCCTA 3034
Query 346 -------------------------------------------------------------------------- 345
Sbjct 3035 CTCTCTGCTACCTGGACGTTCATTCTTATGTATTAGGAGGGAGGCTGCGCTCCTTCAGACTTGCTGCAGAATCA 3108
Query 346 -------------------------------------------------------------------------- 345
Sbjct 3109 TTTTGTATCATGTATGGTCTGTGTCTCCCCAGTCCCCTCAGAACCATGCCCATGGATGGTGACTGCTGGCTCTG 3182
Query 346 -------------------------------------------------------------------------- 345
Sbjct 3183 TCACCTCATCAAACTGGATGTGACCCATGCCGCCTCGTTGGATTGTCGGAATGTAGACAGAAATGTACTGTTCT 3256
Query 346 -------------------------------------------------------------------------- 345
Sbjct 3257 TTTTTTTTTTTTTAAACAATGTAATTGCTACTTGATAAGGACCGAACATTATTCTAGTTTCATGTTTAATTTGA 3330
Query 346 ------------------------------ 345
Sbjct 3331 ATTAAATATATTCTGTGGTTTATATGAAAA 3360
