Nucleotide Global Alignment

Description

• Query: ccsbBroadEn_12222
• Subject: NM_177769.4
• Aligned Length: 1002
• Identities: 728
• Gaps: 177

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGAAGCACTTCCTGAGGATGTTGATCCAGGTGTGCCTGTATTTTTATTGTAAATTTTTGTGGCGCTGCATGAA  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GTTTGTGATGCGGAAACTCACCGGAAGGTGTGAACTGCAAAGGATTTGCTACGGCACCAAACCTGGAGCTTCCA  148

Query    1  -----ATGAAAATCGAAACATCACTGAGGGATTCTAAAAGTAAGCTGTTGCAGACTTCTGTGAGTGTTCACCCC  69
                 ||||||||.|||||.||||||||.|||||.|||||.||||||||||||||.||.|||||||||||.||.
Sbjct  149  GAACCATGAAAATTGAAACGTCACTGAGAGATTCAAAAAGCAAGCTGTTGCAGACATCCGTGAGTGTTCATCCT  222

Query   70  GACGCTATTGAAAAAACTATAGAAGATATCATGGAACTGAAAAAAATTAATCCTGACGTAAATCCACAGCTGGG  143
            ||.|||||||||||.|||||.||.||.|||||||||.|||||||||||||.||||||.|.|||||||||.||||
Sbjct  223  GATGCTATTGAAAAGACTATTGATGACATCATGGAATTGAAAAAAATTAACCCTGACATCAATCCACAGTTGGG  296

Query  144  AATCTCTCTTCAGGCTTGCCTTCTGCAAATCGTTGGGTACAGGAACCTTATTGCAGATGTGGAAAAACTGCGTA  217
            .||||||||.|||||||||||.|||||||||||.||.|||||.|||||.|||||||||||||||||||||||.|
Sbjct  297  GATCTCTCTCCAGGCTTGCCTCCTGCAAATCGTGGGTTACAGAAACCTCATTGCAGATGTGGAAAAACTGCGCA  370

Query  218  GAGAGGCCTATGATTCTGATAATCCCCAACATGAAGAAATGCTTTTGAAGTTATGGAAATTCTTGAAGCCCAAT  291
            ||||..||||||||||.||.||.|||||.||||||||.||||||.|||||.|||||.|..||.||||||||||.
Sbjct  371  GAGAACCCTATGATTCCGACAACCCCCAGCATGAAGAGATGCTTCTGAAGCTATGGGAGCTCCTGAAGCCCAAC  444

Query  292  ACTCCACTGGAATCTCGGATTTCTAAGCAGTGGTGTGAAATTGGTTTCCAAGGTGATGATCCTAAAACAGACTT  365
            |||||||||||.||||||.||||.||||||||||||||.||.||.||||||||.||||||||.||||||||.||
Sbjct  445  ACTCCACTGGAGTCTCGGGTTTCGAAGCAGTGGTGTGAGATCGGCTTCCAAGGCGATGATCCGAAAACAGATTT  518

Query  366  TCGAGGAATGGGACTTCTGGGACTGTACAATTTGCAGTATTTCGCGGAAAGGGATGCCACAGCAGCTCAGCAGG  439
            .|||||||||||.|||||||||||.|||||||||||.|||||.||.|||.||||||||||.|..||||||||||
Sbjct  519  CCGAGGAATGGGTCTTCTGGGACTTTACAATTTGCAATATTTTGCAGAACGGGATGCCACCGTGGCTCAGCAGG  592

Query  440  TCCTGTCTGACTCTCTTCATCCGAAATGCAGGGATATCACTAAAGAAGAAATAAGCAAATTCAGCAAAGCAGAA  513
            ||||.||.||||||.|.|||||.||||||                        |||||||||||||||..||||
Sbjct  593  TCCTCTCCGACTCTGTCCATCCAAAATGC------------------------AGCAAATTCAGCAAAATAGAA  642

Query  514  TGGGAGAAGAAAAGGATGGATAAGGCAATTGGGTACTCATTTGCAATTGTGGGCATCAATATAACTGACCTGGC  587
            |||||.|||||||.|||||||||.||.|||||||||||.|||||||||||||||||||||||.||.||||||||
Sbjct  643  TGGGAAAAGAAAAAGATGGATAAAGCCATTGGGTACTCCTTTGCAATTGTGGGCATCAATATCACCGACCTGGC  716

Query  588  ATATAATCTACTGGTCAGCGGAGCTCTAAAAACCCATTTCTACAATATCGCCCCAGAAGCTCCAACATTGTCTC  661
            |||||||||.||.||.|||||.|||||||||||.||.||||||||.||.|||||.||||||||.|||.||||||
Sbjct  717  ATATAATCTGCTCGTGAGCGGCGCTCTAAAAACACACTTCTACAACATTGCCCCCGAAGCTCCGACACTGTCTC  790

Query  662  ACTTTCAGCAAACATTCTGCTATTTGATGCATGAATTTCATAAGTTTTGGATCGAAGAGGACCCCATGGACATA  735
            ||||.||.|||||||||||||||||||||||.||.|||||.|||||||||||.|||||||||||||||||||||
Sbjct  791  ACTTCCAACAAACATTCTGCTATTTGATGCACGAGTTTCACAAGTTTTGGATTGAAGAGGACCCCATGGACATA  864

Query  736  ATGGAATTTAATCGTGTGAGGGAGAAATTCCGCAAGAGGATCATCAAACAGCTGCAGAACCCAGACATGGCGCT  809
            |||||.||||||||.|||||||||||||||||||||||||||||.||||||||||||||||||||.||||||||
Sbjct  865  ATGGAGTTTAATCGCGTGAGGGAGAAATTCCGCAAGAGGATCATAAAACAGCTGCAGAACCCAGATATGGCGCT  938

Query  810  GTGCCCACATTTTGCTGCCTCGGAAGGTTTAATCAACATG  849
            ||||||.|||||||||||.|||||||||||||||||||||
Sbjct  939  GTGCCCGCATTTTGCTGCATCGGAAGGTTTAATCAACATG  978