Nucleotide Global Alignment

Description

• Query: ccsbBroadEn_12306
• Subject: NM_001146295.1
• Aligned Length: 1460
• Identities: 447
• Gaps: 979

Alignment

Query    1  ATGTATATAAAGATGGCCACGTTAGCAAACGGACAGGCTGACAACGCAAGCCTCAGTACCAACGGGCTCGGCAG  74
            |||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||.|||||
Sbjct    1  ATGTATATAAAGATGGCCACGTTAGCAAACGGACAGGCTGACAACGCGAGCCTCAGTACCAACGGGCTAGGCAG  74

Query   75  CAGCCCGGGCAGTGCCGGGCACATGAACGGATTAAGCCACAGCCCGGGGAACCCGTCGACCATTCCCATGAAGG  148
            ||||||||||||.||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  CAGCCCGGGCAGCGCCGGGCATATGAACGGATTAAGCCACAGCCCGGGGAACCCGTCGACCATTCCCATGAAGG  148

Query  149  ACCATGATGCCATCAAGCTGTTCATTGGGCAGATCCCCCGCAACCTGGATGAGAAGGACCTCAAGCCCCTCTTC  222
            ||||.|||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||
Sbjct  149  ACCACGATGCCATCAAGCTGTTCATTGGGCAGATCCCCCGAAACCTGGATGAGAAGGACCTCAAGCCCCTCTTC  222

Query  223  GAGGAGTTTGGCAAAATCTACGAGCTTACGGTTCTGAAGGACAGGTTCACAGGCATGCACAAAGGCTGCGCCTT  296
            ||||||||.|||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||
Sbjct  223  GAGGAGTTCGGCAAGATCTACGAGCTTACGGTTCTGAAGGACAGGTTCACAGGCATGCACAAAGGCTGCGCTTT  296

Query  297  CCTCACCTACTGCGAGCGTGAGTCAGCGCTGAAGGCCCAGAGCGCGCTGCACGAGCAGAAGACTCTGCCCGGGA  370
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||.
Sbjct  297  CCTCACCTACTGCGAGCGTGAGTCAGCGCTGAAGGCCCAGAGCGCGCTGCACGAGCAGAAGACCCTGCCCGGGG  370

Query  371  TGAA------CCGGCCGATCCAGGTGAAGCCTGCGGACAGCGAGAGCCGAGGAGGTAGTAGCTGCCTGCGCCAG  438
            | ||      |||||||    .||.|.||||.||      ||.|.|||||                        
Sbjct  371  T-AAGTGGCGCCGGCCG----CGGCGCAGCCGGC------CGCGCGCCGA------------------------  409

Query  439  CCCCCTTCACATAGAAAACTCTTCGTGGGCATGCTCAACAAGCAACAGTCCGAGGACGACGTGCGCCGCCTTTT  512
                                                             |.|.||.||||            ||
Sbjct  410  -------------------------------------------------CAGGGGGCGAC------------TT  422

Query  513  C--GAGGCCTTTGGGAACATCGAGGAGTGCACCATCCTGCGCGGGCCCGACGGCAACAGCAAGGGGTGCGCCTT  584
            |  ||||   |.|||  ||.|||              .||||||    |.|||..||||||.||          
Sbjct  423  CGGGAGG---TCGGG--CAGCGA--------------CGCGCGG----GGCGGGGACAGCAGGG----------  463

Query  585  TGTGAAGTACTCCTCCCACGCCGAGGCGCAGGCCGCCATCAACGCGCTACACGGCAGCCAGACCATGCCGGGAG  658
                             ||.|||.|||.||||..|||..|  |||                             
Sbjct  464  -----------------ACCCCGCGGCCCAGGATGCCTCC--CGC-----------------------------  489

Query  659  CCTCGTCCAGTCTGGTGGTCAAGTTCGCCGACACCGACAAGGAGCGCACGATGCGGCGAATGCAGCAGATGGCT  732
                                                                                      
Sbjct  490  --------------------------------------------------------------------------  489

Query  733  GGCCAGATGGGCATGTTCAACCCCATGGCCATCCCTTTCGGGGCCTACGGCGCCTACGCTCAGGCACTGATGCA  806
                                                                                      
Sbjct  490  --------------------------------------------------------------------------  489

Query  807  GCAGCAAGCGGCCCTGATGGCATCAGTCGCGCAGGGCGGCTACCTGAACCCCATGGCTGCCTTCGCTGCCGCCC  880
                                                                                      
Sbjct  490  --------------------------------------------------------------------------  489

Query  881  AGATGCAGCAGATGGCGGCCCTCAACATGAATGGCCTGGCGGCCGCACCTATGACCCCAACCTCAGGTGGCAGC  954
                                                                                      
Sbjct  490  --------------------------------------------------------------------------  489

Query  955  ACCCCTCCGGGCATCACTGCACCAGCCGTGCCTAGCATCCCATCCCCCATTGGGGTGAATGGCTTCACCGGCCT  1028
                                                                                      
Sbjct  490  --------------------------------------------------------------------------  489

Query 1029  CCCCCCACAGGCCAATGGGCAACCTGCTGCGGAAGCTGTGTTCGCCAATGGCATCCACCCCTACCCAGCACAGA  1102
                                                                                      
Sbjct  490  --------------------------------------------------------------------------  489

Query 1103  GCCCCACCGCCGCGGACCCCCTGCAGCAGGCCTACGCCGGAGTGCAGCAGTATGCAGCAGCTGCCTACCCTGCT  1176
                                                                                      
Sbjct  490  --------------------------------------------------------------------------  489

Query 1177  GCCTATGGTCAGATAAGCCAGGCCTTTCCTCAGCCGCCTCCAATGATCCCCCAGCAGCAGAGAGAAGGGCCCGA  1250
                                                                                      
Sbjct  490  --------------------------------------------------------------------------  489

Query 1251  GGGCTGTAACCTGTTCATCTACCATCTGCCCCAGGAGTTTGGGGACGCTGAGCTGATGCAGATGTTCCTCCCTT  1324
                                                                                      
Sbjct  490  --------------------------------------------------------------------------  489

Query 1325  TCGGCTTCGTGAGCTTCGACAACCCGGCCAGCGCGCAGACCGCCATCCAGGCCATGAACGGCTTCCAGATCGGC  1398
                                                                                      
Sbjct  490  --------------------------------------------------------------------------  489

Query 1399  ATGAAGAGGCTCAAGGTGCAGCTGAAGCGGCCCAAAGACGCCAATCGCCCGTAC  1452
                                                                  
Sbjct  490  ------------------------------------------------------  489