Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_12321
- Subject:
- XM_006522553.3
- Aligned Length:
- 2890
- Identities:
- 1651
- Gaps:
- 1085
Alignment
Query 1 ATGAAAGGCAGTAATAGAAATAAGGATCATTCAGCAGAAGGAGAAGGGGTTGGAAAACGACCAAAACGAAAGTG 74
|||||||||||||||||||||||.||.||||||.|||||||||||||||..|||||||||||||||||.|||||
Sbjct 1 ATGAAAGGCAGTAATAGAAATAAAGACCATTCAACAGAAGGAGAAGGGGACGGAAAACGACCAAAACGGAAGTG 74
Query 75 TCTTCAGTGGCATCCATTGCTAGCAAAGAAACTTCTTGATTTTTCAGAAGAGGAAGAAGAGGAAGACGAAGAGG 148
|||||||||||||||.||||||||.|||||||||||.||.||||||||.|||||.||.||.||.||.|||||||
Sbjct 75 TCTTCAGTGGCATCCGTTGCTAGCTAAGAAACTTCTGGACTTTTCAGAGGAGGAGGAGGAAGACGAGGAAGAGG 148
Query 149 AGGATATTGATAAGGTTCAACTTCTTGGGGCCGATGGCCTAGAGCAAGATGTTGGTGAAACTGAAGATGATGAA 222
|.|||||||||||.|||||||||||||.|||.||||||||||||||||||||||.|||.||||||||||||||.
Sbjct 149 AAGATATTGATAAAGTTCAACTTCTTGAGGCGGATGGCCTAGAGCAAGATGTTGCTGAGACTGAAGATGATGAG 222
Query 223 TCACCAGAGCAGCGAGCCCGGAGACCAATGAATGCATTTCTTTTATTTTGCAAACGCCATCGCTCTCTTGTACG 296
|||||.|||||||||||||||||||||||||||||||||||||||||||||||.|||||.|||||.|||||.||
Sbjct 223 TCACCTGAGCAGCGAGCCCGGAGACCAATGAATGCATTTCTTTTATTTTGCAAGCGCCACCGCTCCCTTGTCCG 296
Query 297 TCAGGAACACCCCAGGCTTGATAACCGAGGTGCTACCAAGATACTAGCTGATTGGTGGGCTGTTCTTGATCCAA 370
.|||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|
Sbjct 297 ACAGGAACACCCAAGGCTTGATAACCGAGGTGCTACCAAGATACTAGCTGATTGGTGGGCTGTTCTTGATCCTA 370
Query 371 AGGAAAAGCAGAAATACACAGACATGGCCAAGGAGTATAAGGATGCATTTATGAAAGCAAATCCTGGCTACAAA 444
||||||||||||||||.|||||||||||||||||||||||.|||||||||||||||||||||||||||||||.|
Sbjct 371 AGGAAAAGCAGAAATATACAGACATGGCCAAGGAGTATAAAGATGCATTTATGAAAGCAAATCCTGGCTACAGA 444
Query 445 TGGTGTCCTACCACAAACAAGCCTGTGAAATCCCCAACACCCACTGTCAATCCACGAAAGAAACTTTGGGCCTT 518
|||||.||||||||||||||||||||||||||.|||||||||||||||||||||||.|||||||||||||||||
Sbjct 445 TGGTGCCCTACCACAAACAAGCCTGTGAAATCGCCAACACCCACTGTCAATCCACGGAAGAAACTTTGGGCCTT 518
Query 519 CCCATCTGACTCTTCAAGAGACTTGCCAAGCCCCAAGAAAGCAAAGACTGAAGAAATGCCTCAGCTTAACTTTG 592
||||.||||||||||||||||||||||||.|||||||||.|||||||| ||||.|.||||||||.|||||||
Sbjct 519 CCCACCTGACTCTTCAAGAGACTTGCCAACCCCCAAGAAGGCAAAGAC---AGAAGTTCCTCAGCTCAACTTTG 589
Query 593 GAATGGCTGATCCTACTCAAATGGGAGGCCTGAGTATGCTGCTGTTAGCTGGAGAACATGCTCTTGGCACACCA 666
|||||||.|||||||||||.|||||.||||||||.|||.|||||.||||||||||.||.||||||||.||||||
Sbjct 590 GAATGGCAGATCCTACTCAGATGGGGGGCCTGAGCATGTTGCTGCTAGCTGGAGAGCACGCTCTTGGGACACCA 663
Query 667 GAGGTATCCTCTGGCACATGCAGGCCTGATGTTTCAGAATCTCCTGAATTACGTCAGAAGTCACCATTGTTTCA 740
||||.|||||||||.||.||||||||||||.||||||||||.|||||.||.|||||||||||||||||||||||
Sbjct 664 GAGGCATCCTCTGGGACTTGCAGGCCTGATATTTCAGAATCACCTGAGTTGCGTCAGAAGTCACCATTGTTTCA 737
Query 741 GTTTGCCGAGATATCTTCAAGTACGTCCCACTCTGATGCTTCTACAAAGCAGTGTCAAACATCTGCCTTGTTTC 814
|||||||||||||||||||||.||.||.|||.|.|||||..||.||||.|||||||||.|.||.||||||||||
Sbjct 738 GTTTGCCGAGATATCTTCAAGGACATCGCACCCCGATGCGCCTTCAAAACAGTGTCAAGCGTCAGCCTTGTTTC 811
Query 815 AGTTTGCAGAGATTTCTTCAAACACTTCGCAGTTGGGTGGTGCTGAGCCTGTAAAACGCTGTGGAAAGTCTGCA 888
|||||||||||||.|||||||.||||||||||||||||||..||||||||||.||||||||||||||.||||||
Sbjct 812 AGTTTGCAGAGATCTCTTCAAGCACTTCGCAGTTGGGTGGCACTGAGCCTGTGAAACGCTGTGGAAATTCTGCA 885
Query 889 CTCTTTCAACTGG------------------------------------------------------------- 901
|||||||||||||
Sbjct 886 CTCTTTCAACTGGCAGAGATGTGTCTGGCATCAGAGGGGGTGAAAATGGAAGACACAAAACTAATAAAATCAAA 959
Query 902 -------------------------------------------------------------------------- 901
Sbjct 960 AGAGTCAGATGGAGGAAGAATTGAGGAAATAGAAAAGGGGAAGGAAGAGAGAGGCACAGAAGTGGAGAAAACCA 1033
Query 902 -------------------------------------------------------------------------- 901
Sbjct 1034 CTGAAACTTCGTTCCAGAAGGAAGCAGAATTTGGGAAGTCAGCTAAGGGCAACGTGAGAGAGTCTAAGGACTTA 1107
Query 902 -------------------------------------------------------------------------- 901
Sbjct 1108 AGAGACATCGAACAGCTACAGATGGATAATGTCATGGCTATCAAAGTGGAAGACCCCAAAGAAATTAGGAAGGA 1181
Query 902 -------------------------------------------------------------------------- 901
Sbjct 1182 GCCAGAGGATGATCAGAAATACAGTCACTTCCCTGATTTTTCTTACTCTGCCAGTAGCAAGATAATAATTAGTG 1255
Query 902 -------------------------------------------------------------------------- 901
Sbjct 1256 GTGTCCCCAGTAGAAAGGACCACATGTGCCATCCTCACGGAATTATGATCATTGAGGACCCAACCACGCTAAAC 1329
Query 902 -------------------------------------------------------------------------- 901
Sbjct 1330 AAACCAGAGAAGATAAAGAAGAAAAAGAAGAAAAACAAACTGGATCGACACGGAAATGACAAATCCACACCCAA 1403
Query 902 -------------------------------------------------------------------------- 901
Sbjct 1404 GAAGACGTGCAAGAAGAGGCAGTCTTCAGAATCTGACATCGAGAGTGTCATGTACACCATCGAAGCTGTGGCAA 1477
Query 902 -------------------------------------------------------------------------- 901
Sbjct 1478 AAGGAGACTGGGGTGTTGACAAACTCGGAGAAACCCCAAGAAAGAAAGTCCGCCCCTCCTCAAGTGGCAAGGGA 1551
Query 902 -------------------------------------------------------------------------- 901
Sbjct 1552 GGCATTTTGGATGCCAAGCCACCAAAGAAAAAAGTGAAATCCAAGGAGAAGAAAGTTTCCAAGGAGAAGTGCTC 1625
Query 902 -------------------------------------------------------------------------- 901
Sbjct 1626 AGACATCACCAAAGAGTCTCGACCTCCAGATTTCCTTAGCATTTCTGCCAGCAAGAGTGTTCCTGGGGAGGTGC 1699
Query 902 -------------------------------------------------------------------------- 901
Sbjct 1700 CAGAGGGCATAAAAGCAGAACCCTTGACCCCTACCGAGGATGCACTGCCACCTAGCCTACCAGGACAGGCTAAG 1773
Query 902 -------------------------------------------------------------------------- 901
Sbjct 1774 CCTGAGGATAGTGATTGTCACAGAAAAACGGAGACCTGTGGCTCCAGGAAATCTGAGAGGTCTTGCAAAGGTGC 1847
Query 902 ---------------------------------------------------------CAGAGGAAAACGAAGCT 918
||||||.||||||||||
Sbjct 1848 TCTTTATAAAACCCTGGTGTCCGAGGGCATGCTCACCTCTCTCCGAGCTAATGTTGACAGAGGGAAACGAAGCT 1921
Query 919 CAGGAAAAGGAAACTCCTCTGATCATGAAGGGTGTTGGAATGAAGAAAGCTGGACATTTAGTCAGAGTGGGACC 992
|||||||||||||||||||||||||||||||||||||||.||||||.|||||||||||||.|||||||||||||
Sbjct 1922 CAGGAAAAGGAAACTCCTCTGATCATGAAGGGTGTTGGAGTGAAGAGAGCTGGACATTTAATCAGAGTGGGACC 1995
Query 993 AGTGGGAGCAAGAAGTTCAAGAAGACAAAGCCAAAAGAAGACTGTCTCCTTGGCTCCGCAAAGCTGGATGAAGA 1066
|||||||||||||||||.|||||| ||.|.||..|||||||...|||||||.||.||.||||||||||||||
Sbjct 1996 AGTGGGAGCAAGAAGTTTAAGAAG---AAACTAAGGGAAGACTCCTTCCTTGGTTCTGCGAAGCTGGATGAAGA 2066
Query 1067 ATTTGAAAAAAAATTCAACAGCCTCCCTCAATATAGTCCTGTTACATTTGACCGGAAATGTGTACCTGTCCCAA 1140
|||||||||.||||||||||||||||||||||||||||||.|||||||||||||||||||.|||.||...||||
Sbjct 2067 ATTTGAAAAGAAATTCAACAGCCTCCCTCAATATAGTCCTATTACATTTGACCGGAAATGCGTATCTACTCCAA 2140
Query 1141 GAAAAAAGAAGAAGACTGGAAATGTGTCCTCAGAACCGACTAAAACCAGCAAAGGTCCTTTCCAGTCTCAGAAA 1214
||||||||||||||||||||||..|||||||||||.||||||||||||||||||||||||||||||||||||||
Sbjct 2141 GAAAAAAGAAGAAGACTGGAAACATGTCCTCAGAATCGACTAAAACCAGCAAAGGTCCTTTCCAGTCTCAGAAA 2214
Query 1215 AAGAACTTATTCCACAAAATTGTCAGCAAATATAAGCACAAAAAGGAGAAGCCCAATGTTCCGGAAAAAGGAAG 1288
|||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||.|||||||||||
Sbjct 2215 AAGAACTTATTCCACAAAATTGTCAGCAAATATAAGCACAAAAAGGAGAAGCCTAATGTTCCAGAAAAAGGAAG 2288
Query 1289 TGGGGATAAATGGTCAAACAAGCAACTCTTCTTGGATGCCATTCACCCTACAGAAGCCATATTTTCAGAAGACA 1362
||||||||||||||||.||||||||.|.||||||||||||||||||||||||||||||||||||||.|||||.|
Sbjct 2289 TGGGGATAAATGGTCACACAAGCAATTTTTCTTGGATGCCATTCACCCTACAGAAGCCATATTTTCCGAAGATA 2362
Query 1363 GAAACACCATGGAGCCTGTTCATAAGGTTAAAAATATCCCATCCATTTTCAACACTCCAGAGCCAACAACAACG 1436
.||.|||||..|||||||.|..|||||||||||||..||.|||||||..|||||||||||||||||||||||.|
Sbjct 2363 AAAGCACCACAGAGCCTGCTTTTAAGGTTAAAAATGCCCTATCCATTCCCAACACTCCAGAGCCAACAACAATG 2436
Query 1437 CAAGAACCTTTGGTGGGCAGCCAAAAGAGAAAAGCAAGGAAAACCAAGATTACACACCTTGTCAGGACAGCAGA 1510
||||||||||||||.|||||||||||||||||||||||||||||||||||.|||||||||||||||||.|||||
Sbjct 2437 CAAGAACCTTTGGTTGGCAGCCAAAAGAGAAAAGCAAGGAAAACCAAGATCACACACCTTGTCAGGACTGCAGA 2510
Query 1511 TGGCCGGGTATCACCAGCAGGAGGTACTTTGGATGACAAACCAAAGGAACAACTGCAGAGGAGTCTCCCTAAAG 1584
||||||.|||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||.||||
Sbjct 2511 TGGCCGAGTATCACCAGCAGGAGGTACTTTGGATGACAAACCAAAGGAGCAACTGCAGAGGAGTCTCCCCAAAG 2584
Query 1585 CAACTGAGACAGACTGCAATGACAAATGCTCACACAACACCGAGGTCGGGGAGACGCGGAGCAGTACTCCAGAA 1658
...|||.||||.|||||..||||||.||||||||||.||| |||.|.||||.|.||||||||.||||||||.
Sbjct 2585 TCCCTGGGACATACTGCGGTGACAATTGCTCACACAGCAC---GGTTGAGGAGCCACGGAGCAGCACTCCAGAC 2655
Query 1659 ATGCCTGCCGTGTCTGCGTTCTTTAGCCTCGCTGCGCTGGCTGAAGTGGCAGCCATGGAAAATGTGCACAGAGG 1732
||||||||.||||||||||||||.|||||||||||.||||||||.||.||.||||||||.||||||||||||||
Sbjct 2656 ATGCCTGCTGTGTCTGCGTTCTTCAGCCTCGCTGCACTGGCTGAGGTTGCGGCCATGGAGAATGTGCACAGAGG 2729
Query 1733 TCAGAGGTCAACTCCGCTCACCCATGATGGACAGCCAAAAGAAATGCCGCAGGCTCCTGTACTTATTTCCTGCG 1806
.|||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||.|
Sbjct 2730 CCAGAGATCAACTCCGCTCACCCATGATGGACAGCCAAAAGAAATGCCGCAGGCTCCTGTACTTATTTCTTGTG 2803
Query 1807 CTGACCAGTGAAGCGCCCTTTCATTGTAAAACATTGTGCTTTACCTACTACCCTAGCCTTGTCTTTACCGAGGG 1880
||||||||
Sbjct 2804 CTGACCAG------------------------------------------------------------------ 2811
Query 1881 ATGC 1884
Sbjct 2812 ---- 2811
