Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_12321
- Subject:
- XM_017006881.2
- Aligned Length:
- 2893
- Identities:
- 1814
- Gaps:
- 1079
Alignment
Query 1 ATGAAAGGCAGTAATAGAAATAAGGATCATTCAGCAGAAGGAGAAGGGGTTGGAAAACGACCAAAACGAAAGTG 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGAAAGGCAGTAATAGAAATAAGGATCATTCAGCAGAAGGAGAAGGGGTTGGAAAACGACCAAAACGAAAGTG 74
Query 75 TCTTCAGTGGCATCCATTGCTAGCAAAGAAACTTCTTGATTTTTCAGAAGAGGAAGAAGAGGAAGACGAAGAGG 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 TCTTCAGTGGCATCCATTGCTAGCAAAGAAACTTCTTGATTTTTCAGAAGAGGAAGAAGAGGAAGACGAAGAGG 148
Query 149 AGGATATTGATAAGGTTCAACTTCTTGGGGCCGATGGCCTAGAGCAAGATGTTGGTGAAACTGAAGATGATGAA 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 AGGATATTGATAAGGTTCAACTTCTTGGGGCCGATGGCCTAGAGCAAGATGTTGGTGAAACTGAAGATGATGAA 222
Query 223 TCACCAGAGCAGCGAGCCCGGAGACCAATGAATGCATTTCTTTTATTTTGCAAACGCCATCGCTCTCTTGTACG 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 TCACCAGAGCAGCGAGCCCGGAGACCAATGAATGCATTTCTTTTATTTTGCAAACGCCATCGCTCTCTTGTACG 296
Query 297 TCAGGAACACCCCAGGCTTGATAACCGAGGTGCTACCAAGATACTAGCTGATTGGTGGGCTGTTCTTGATCCAA 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 TCAGGAACACCCCAGGCTTGATAACCGAGGTGCTACCAAGATACTAGCTGATTGGTGGGCTGTTCTTGATCCAA 370
Query 371 AGGAAAAGCAGAAATACACAGACATGGCCAAGGAGTATAAGGATGCATTTATGAAAGCAAATCCTGGCTACAAA 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 AGGAAAAGCAGAAATACACAGACATGGCCAAGGAGTATAAGGATGCATTTATGAAAGCAAATCCTGGCTACAAA 444
Query 445 TGGTGTCCTACCACAAACAAGCCTGTGAAATCCCCAACACCCACTGTCAATCCACGAAAGAAACTTTGGGCCTT 518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 TGGTGTCCTACCACAAACAAGCCTGTGAAATCCCCAACACCCACTGTCAATCCACGAAAGAAACTTTGGGCCTT 518
Query 519 CCCATCTGACTCTTCAAGAGACTTGCCAAGCCCCAAGAAAGCAAAGACTGAAGAAATGCCTCAGCTTAACTTTG 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 CCCATCTGACTCTTCAAGAGACTTGCCAAGCCCCAAGAAAGCAAAGACTGAAGAAATGCCTCAGCTTAACTTTG 592
Query 593 GAATGGCTGATCCTACTCAAATGGGAGGCCTGAGTATGCTGCTGTTAGCTGGAGAACATGCTCTTGGCACACCA 666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 GAATGGCTGATCCTACTCAAATGGGAGGCCTGAGTATGCTGCTGTTAGCTGGAGAACATGCTCTTGGCACACCA 666
Query 667 GAGGTATCCTCTGGCACATGCAGGCCTGATGTTTCAGAATCTCCTGAATTACGTCAGAAGTCACCATTGTTTCA 740
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 GAGGTATCCTCTGGCACATGCAGGCCTGATGTTTCAGAATCTCCTGAATTACGTCAGAAGTCACCATTGTTTCA 740
Query 741 GTTTGCCGAGATATCTTCAAGTACGTCCCACTCTGATGCTTCTACAAAGCAGTGTCAAACATCTGCCTTGTTTC 814
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 GTTTGCCGAGATATCTTCAAGTACGTCCCACTCTGATGCTTCTACAAAGCAGTGTCAAACATCTGCCTTGTTTC 814
Query 815 AGTTTGCAGAGATTTCTTCAAACACTTCGCAGTTGGGTGGTGCTGAGCCTGTAAAACGCTGTGGAAAGTCTGCA 888
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 AGTTTGCAGAGATTTCTTCAAACACTTCGCAGTTGGGTGGTGCTGAGCCTGTAAAACGCTGTGGAAAGTCTGCA 888
Query 889 CTCTTTCAACTGG------------------------------------------------------------- 901
|||||||||||||
Sbjct 889 CTCTTTCAACTGGCAGAGATGTGCCTGGCATCAGAAGGGATGAAAATGGAAGAATCAAAGCTAATAAAAGCAAA 962
Query 902 -------------------------------------------------------------------------- 901
Sbjct 963 AGAATCCGATGGTGGAAGAATTAAAGAATTAGAGAAGGGAAAGGAAGAAAAAGAAATTAAAATGGAGAAAACAG 1036
Query 902 -------------------------------------------------------------------------- 901
Sbjct 1037 ATGAAACTAGGTTACAGAAGGAAGCAGAATTTGAAAAATCGGCTAAGGAAAATTTAAGAGATTCTAAGGAATTG 1110
Query 902 -------------------------------------------------------------------------- 901
Sbjct 1111 AGAAATTTTGAGGCATTGCAAATAGATGACATAATGGCTATAAAAATGGAAGATCCCAAAGAAATTAGAAAGGA 1184
Query 902 -------------------------------------------------------------------------- 901
Sbjct 1185 AGAGTTAGAAGAAGATCACAAATGTAGTCATTTTCCTGATTTTTCTTATTCTGCCAGTAGCAAGATAATAATTA 1258
Query 902 -------------------------------------------------------------------------- 901
Sbjct 1259 GTGATGTTCCCAGTAGAAAGGATCATATGTGCCATCCTCATGGAATTATGATCATTGAGGATCCCGCAGCATTA 1332
Query 902 -------------------------------------------------------------------------- 901
Sbjct 1333 AACAAGCCAGAAAAGCTAAAAAAGAAAAAGAAGAAAAGCAAAATGGATCGACATGGAAATGATAAATCCACACC 1406
Query 902 -------------------------------------------------------------------------- 901
Sbjct 1407 CAAGAAGACTTGCAAAAAGAGGCAGTCTTCGGAATCTGACATTGAGAGCGTCATATATACCATTGAAGCCGTCG 1480
Query 902 -------------------------------------------------------------------------- 901
Sbjct 1481 CAAAAGGAGACTGGGGCATAGAGAAACTTGGAGATACCCCTCGCAAGAAGGTCCGCACATCCTCAAGTGGCAAG 1554
Query 902 -------------------------------------------------------------------------- 901
Sbjct 1555 GGAAGCATTTTGGATGCCAAGCCACCAAAGAAAAAAGTGAAATCAAGAGAGAAGAAAATGTCAAAGGAGAAATC 1628
Query 902 -------------------------------------------------------------------------- 901
Sbjct 1629 CTCAGACACCACCAAAGAGTCAAGACCTCCAGATTTCATTAGTATTTCTGCTAGCAAGAACATTTCTGGTGAGA 1702
Query 902 -------------------------------------------------------------------------- 901
Sbjct 1703 CACCAGAGGGTATAAAAGCAGAACCATTGACCCCTATGGAAGATGCACTACCACCCAGCCTATCAGGACAGGCC 1776
Query 902 -------------------------------------------------------------------------- 901
Sbjct 1777 AAGCCTGAGGACAGTGACTGTCACAGAAAAATAGAAACTTGTGGTTCCAGGAAATCCGAGAGGTCTTGCAAAGG 1850
Query 902 ------------------------------------------------------------CAGAGGAAAACGAA 915
||||||||||||||
Sbjct 1851 TGCTCTTTATAAAACCCTGGTGTCTGAGGGCATGCTCACCTCTCTGCGAGCTAATGTTGACAGAGGAAAACGAA 1924
Query 916 GCTCAGGAAAAGGAAACTCCTCTGATCATGAAGGGTGTTGGAATGAAGAAAGCTGGACATTTAGTCAGAGTGGG 989
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1925 GCTCAGGAAAAGGAAACTCCTCTGATCATGAAGGGTGTTGGAATGAAGAAAGCTGGACATTTAGTCAGAGTGGG 1998
Query 990 ACCAGTGGGAGCAAGAAGTTCAAGAAGACAAAGCCAAAAGAAGACTGTCTCCTTGGCTCCGCAAAGCTGGATGA 1063
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1999 ACCAGTGGGAGCAAGAAGTTCAAGAAGACAAAGCCAAAAGAAGACTGTCTCCTTGGCTCCGCAAAGCTGGATGA 2072
Query 1064 AGAATTTGAAAAAAAATTCAACAGCCTCCCTCAATATAGTCCTGTTACATTTGACCGGAAATGTGTACCTGTCC 1137
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2073 AGAATTTGAAAAAAAATTCAACAGCCTCCCTCAATATAGTCCTGTTACATTTGACCGGAAATGTGTACCTGTCC 2146
Query 1138 CAAGAAAAAAGAAGAAGACTGGAAATGTGTCCTCAGAACCGACTAAAACCAGCAAAGGTCCTTTCCAGTCTCAG 1211
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2147 CAAGAAAAAAGAAGAAGACTGGAAATGTGTCCTCAGAACCGACTAAAACCAGCAAAGGTCCTTTCCAGTCTCAG 2220
Query 1212 AAAAAGAACTTATTCCACAAAATTGTCAGCAAATATAAGCACAAAAAGGAGAAGCCCAATGTTCCGGAAAAAGG 1285
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2221 AAAAAGAACTTATTCCACAAAATTGTCAGCAAATATAAGCACAAAAAGGAGAAGCCCAATGTTCCGGAAAAAGG 2294
Query 1286 AAGTGGGGATAAATGGTCAAACAAGCAACTCTTCTTGGATGCCATTCACCCTACAGAAGCCATATTTTCAGAAG 1359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2295 AAGTGGGGATAAATGGTCAAACAAGCAACTCTTCTTGGATGCCATTCACCCTACAGAAGCCATATTTTCAGAAG 2368
Query 1360 ACAGAAACACCATGGAGCCTGTTCATAAGGTTAAAAATATCCCATCCATTTTCAACACTCCAGAGCCAACAACA 1433
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2369 ACAGAAACACCATGGAGCCTGTTCATAAGGTTAAAAATATCCCATCCATTTTCAACACTCCAGAGCCAACAACA 2442
Query 1434 ACGCAAGAACCTTTGGTGGGCAGCCAAAAGAGAAAAGCAAGGAAAACCAAGATTACACACCTTGTCAGGACAGC 1507
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2443 ACGCAAGAACCTTTGGTGGGCAGCCAAAAGAGAAAAGCAAGGAAAACCAAGATTACACACCTTGTCAGGACAGC 2516
Query 1508 AGATGGCCGGGTATCACCAGCAGGAGGTACTTTGGATGACAAACCAAAGGAACAACTGCAGAGGAGTCTCCCTA 1581
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2517 AGATGGCCGGGTATCACCAGCAGGAGGTACTTTGGATGACAAACCAAAGGAACAACTGCAGAGGAGTCTCCCTA 2590
Query 1582 AAGCAACTGAGACAGACTGCAATGACAAATGCTCACACAACACCGAGGTCGGGGAGACGCGGAGCAGTACTCCA 1655
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2591 AAGCAACTGAGACAGACTGCAATGACAAATGCTCACACAACACCGAGGTCGGGGAGACGCGGAGCAGTACTCCA 2664
Query 1656 GAAATGCCTGCCGTGTCTGCGTTCTTTAGCCTCGCTGCGCTGGCTGAAGTGGCAGCCATGGAAAATGTGCACAG 1729
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2665 GAAATGCCTGCCGTGTCTGCGTTCTTTAGCCTCGCTGCGCTGGCTGAAGTGGCAGCCATGGAAAATGTGCACAG 2738
Query 1730 AGGTCAGAGGTCAACTCCGCTCACCCATGATGGACAGCCAAAAGAAATGCCGCAGGCTCCTGTACTTATTTCCT 1803
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2739 AGGTCAGAGGTCAACTCCGCTCACCCATGATGGACAGCCAAAAGAAATGCCGCAGGCTCCTGTACTTATTTCCT 2812
Query 1804 GCGCTGACCAGTGAAGCGCCCTTTCATTGTAAAACATTGTGCTTTACCTACTACCCTAGCCTTGTCTTTACCGA 1877
|||||||||||
Sbjct 2813 GCGCTGACCAG--------------------------------------------------------------- 2823
Query 1878 GGGATGC 1884
Sbjct 2824 ------- 2823
