Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_12321
Subject:
XM_024453652.1
Aligned Length:
2893
Identities:
1814
Gaps:
1079

Alignment

Query    1  ATGAAAGGCAGTAATAGAAATAAGGATCATTCAGCAGAAGGAGAAGGGGTTGGAAAACGACCAAAACGAAAGTG  74
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGAAAGGCAGTAATAGAAATAAGGATCATTCAGCAGAAGGAGAAGGGGTTGGAAAACGACCAAAACGAAAGTG  74

Query   75  TCTTCAGTGGCATCCATTGCTAGCAAAGAAACTTCTTGATTTTTCAGAAGAGGAAGAAGAGGAAGACGAAGAGG  148
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  TCTTCAGTGGCATCCATTGCTAGCAAAGAAACTTCTTGATTTTTCAGAAGAGGAAGAAGAGGAAGACGAAGAGG  148

Query  149  AGGATATTGATAAGGTTCAACTTCTTGGGGCCGATGGCCTAGAGCAAGATGTTGGTGAAACTGAAGATGATGAA  222
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  AGGATATTGATAAGGTTCAACTTCTTGGGGCCGATGGCCTAGAGCAAGATGTTGGTGAAACTGAAGATGATGAA  222

Query  223  TCACCAGAGCAGCGAGCCCGGAGACCAATGAATGCATTTCTTTTATTTTGCAAACGCCATCGCTCTCTTGTACG  296
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  TCACCAGAGCAGCGAGCCCGGAGACCAATGAATGCATTTCTTTTATTTTGCAAACGCCATCGCTCTCTTGTACG  296

Query  297  TCAGGAACACCCCAGGCTTGATAACCGAGGTGCTACCAAGATACTAGCTGATTGGTGGGCTGTTCTTGATCCAA  370
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  TCAGGAACACCCCAGGCTTGATAACCGAGGTGCTACCAAGATACTAGCTGATTGGTGGGCTGTTCTTGATCCAA  370

Query  371  AGGAAAAGCAGAAATACACAGACATGGCCAAGGAGTATAAGGATGCATTTATGAAAGCAAATCCTGGCTACAAA  444
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  AGGAAAAGCAGAAATACACAGACATGGCCAAGGAGTATAAGGATGCATTTATGAAAGCAAATCCTGGCTACAAA  444

Query  445  TGGTGTCCTACCACAAACAAGCCTGTGAAATCCCCAACACCCACTGTCAATCCACGAAAGAAACTTTGGGCCTT  518
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  TGGTGTCCTACCACAAACAAGCCTGTGAAATCCCCAACACCCACTGTCAATCCACGAAAGAAACTTTGGGCCTT  518

Query  519  CCCATCTGACTCTTCAAGAGACTTGCCAAGCCCCAAGAAAGCAAAGACTGAAGAAATGCCTCAGCTTAACTTTG  592
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  CCCATCTGACTCTTCAAGAGACTTGCCAAGCCCCAAGAAAGCAAAGACTGAAGAAATGCCTCAGCTTAACTTTG  592

Query  593  GAATGGCTGATCCTACTCAAATGGGAGGCCTGAGTATGCTGCTGTTAGCTGGAGAACATGCTCTTGGCACACCA  666
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  GAATGGCTGATCCTACTCAAATGGGAGGCCTGAGTATGCTGCTGTTAGCTGGAGAACATGCTCTTGGCACACCA  666

Query  667  GAGGTATCCTCTGGCACATGCAGGCCTGATGTTTCAGAATCTCCTGAATTACGTCAGAAGTCACCATTGTTTCA  740
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  GAGGTATCCTCTGGCACATGCAGGCCTGATGTTTCAGAATCTCCTGAATTACGTCAGAAGTCACCATTGTTTCA  740

Query  741  GTTTGCCGAGATATCTTCAAGTACGTCCCACTCTGATGCTTCTACAAAGCAGTGTCAAACATCTGCCTTGTTTC  814
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  GTTTGCCGAGATATCTTCAAGTACGTCCCACTCTGATGCTTCTACAAAGCAGTGTCAAACATCTGCCTTGTTTC  814

Query  815  AGTTTGCAGAGATTTCTTCAAACACTTCGCAGTTGGGTGGTGCTGAGCCTGTAAAACGCTGTGGAAAGTCTGCA  888
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  AGTTTGCAGAGATTTCTTCAAACACTTCGCAGTTGGGTGGTGCTGAGCCTGTAAAACGCTGTGGAAAGTCTGCA  888

Query  889  CTCTTTCAACTGG-------------------------------------------------------------  901
            |||||||||||||                                                             
Sbjct  889  CTCTTTCAACTGGCAGAGATGTGCCTGGCATCAGAAGGGATGAAAATGGAAGAATCAAAGCTAATAAAAGCAAA  962

Query  902  --------------------------------------------------------------------------  901
                                                                                      
Sbjct  963  AGAATCCGATGGTGGAAGAATTAAAGAATTAGAGAAGGGAAAGGAAGAAAAAGAAATTAAAATGGAGAAAACAG  1036

Query  902  --------------------------------------------------------------------------  901
                                                                                      
Sbjct 1037  ATGAAACTAGGTTACAGAAGGAAGCAGAATTTGAAAAATCGGCTAAGGAAAATTTAAGAGATTCTAAGGAATTG  1110

Query  902  --------------------------------------------------------------------------  901
                                                                                      
Sbjct 1111  AGAAATTTTGAGGCATTGCAAATAGATGACATAATGGCTATAAAAATGGAAGATCCCAAAGAAATTAGAAAGGA  1184

Query  902  --------------------------------------------------------------------------  901
                                                                                      
Sbjct 1185  AGAGTTAGAAGAAGATCACAAATGTAGTCATTTTCCTGATTTTTCTTATTCTGCCAGTAGCAAGATAATAATTA  1258

Query  902  --------------------------------------------------------------------------  901
                                                                                      
Sbjct 1259  GTGATGTTCCCAGTAGAAAGGATCATATGTGCCATCCTCATGGAATTATGATCATTGAGGATCCCGCAGCATTA  1332

Query  902  --------------------------------------------------------------------------  901
                                                                                      
Sbjct 1333  AACAAGCCAGAAAAGCTAAAAAAGAAAAAGAAGAAAAGCAAAATGGATCGACATGGAAATGATAAATCCACACC  1406

Query  902  --------------------------------------------------------------------------  901
                                                                                      
Sbjct 1407  CAAGAAGACTTGCAAAAAGAGGCAGTCTTCGGAATCTGACATTGAGAGCGTCATATATACCATTGAAGCCGTCG  1480

Query  902  --------------------------------------------------------------------------  901
                                                                                      
Sbjct 1481  CAAAAGGAGACTGGGGCATAGAGAAACTTGGAGATACCCCTCGCAAGAAGGTCCGCACATCCTCAAGTGGCAAG  1554

Query  902  --------------------------------------------------------------------------  901
                                                                                      
Sbjct 1555  GGAAGCATTTTGGATGCCAAGCCACCAAAGAAAAAAGTGAAATCAAGAGAGAAGAAAATGTCAAAGGAGAAATC  1628

Query  902  --------------------------------------------------------------------------  901
                                                                                      
Sbjct 1629  CTCAGACACCACCAAAGAGTCAAGACCTCCAGATTTCATTAGTATTTCTGCTAGCAAGAACATTTCTGGTGAGA  1702

Query  902  --------------------------------------------------------------------------  901
                                                                                      
Sbjct 1703  CACCAGAGGGTATAAAAGCAGAACCATTGACCCCTATGGAAGATGCACTACCACCCAGCCTATCAGGACAGGCC  1776

Query  902  --------------------------------------------------------------------------  901
                                                                                      
Sbjct 1777  AAGCCTGAGGACAGTGACTGTCACAGAAAAATAGAAACTTGTGGTTCCAGGAAATCCGAGAGGTCTTGCAAAGG  1850

Query  902  ------------------------------------------------------------CAGAGGAAAACGAA  915
                                                                        ||||||||||||||
Sbjct 1851  TGCTCTTTATAAAACCCTGGTGTCTGAGGGCATGCTCACCTCTCTGCGAGCTAATGTTGACAGAGGAAAACGAA  1924

Query  916  GCTCAGGAAAAGGAAACTCCTCTGATCATGAAGGGTGTTGGAATGAAGAAAGCTGGACATTTAGTCAGAGTGGG  989
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1925  GCTCAGGAAAAGGAAACTCCTCTGATCATGAAGGGTGTTGGAATGAAGAAAGCTGGACATTTAGTCAGAGTGGG  1998

Query  990  ACCAGTGGGAGCAAGAAGTTCAAGAAGACAAAGCCAAAAGAAGACTGTCTCCTTGGCTCCGCAAAGCTGGATGA  1063
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1999  ACCAGTGGGAGCAAGAAGTTCAAGAAGACAAAGCCAAAAGAAGACTGTCTCCTTGGCTCCGCAAAGCTGGATGA  2072

Query 1064  AGAATTTGAAAAAAAATTCAACAGCCTCCCTCAATATAGTCCTGTTACATTTGACCGGAAATGTGTACCTGTCC  1137
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2073  AGAATTTGAAAAAAAATTCAACAGCCTCCCTCAATATAGTCCTGTTACATTTGACCGGAAATGTGTACCTGTCC  2146

Query 1138  CAAGAAAAAAGAAGAAGACTGGAAATGTGTCCTCAGAACCGACTAAAACCAGCAAAGGTCCTTTCCAGTCTCAG  1211
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2147  CAAGAAAAAAGAAGAAGACTGGAAATGTGTCCTCAGAACCGACTAAAACCAGCAAAGGTCCTTTCCAGTCTCAG  2220

Query 1212  AAAAAGAACTTATTCCACAAAATTGTCAGCAAATATAAGCACAAAAAGGAGAAGCCCAATGTTCCGGAAAAAGG  1285
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2221  AAAAAGAACTTATTCCACAAAATTGTCAGCAAATATAAGCACAAAAAGGAGAAGCCCAATGTTCCGGAAAAAGG  2294

Query 1286  AAGTGGGGATAAATGGTCAAACAAGCAACTCTTCTTGGATGCCATTCACCCTACAGAAGCCATATTTTCAGAAG  1359
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2295  AAGTGGGGATAAATGGTCAAACAAGCAACTCTTCTTGGATGCCATTCACCCTACAGAAGCCATATTTTCAGAAG  2368

Query 1360  ACAGAAACACCATGGAGCCTGTTCATAAGGTTAAAAATATCCCATCCATTTTCAACACTCCAGAGCCAACAACA  1433
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2369  ACAGAAACACCATGGAGCCTGTTCATAAGGTTAAAAATATCCCATCCATTTTCAACACTCCAGAGCCAACAACA  2442

Query 1434  ACGCAAGAACCTTTGGTGGGCAGCCAAAAGAGAAAAGCAAGGAAAACCAAGATTACACACCTTGTCAGGACAGC  1507
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2443  ACGCAAGAACCTTTGGTGGGCAGCCAAAAGAGAAAAGCAAGGAAAACCAAGATTACACACCTTGTCAGGACAGC  2516

Query 1508  AGATGGCCGGGTATCACCAGCAGGAGGTACTTTGGATGACAAACCAAAGGAACAACTGCAGAGGAGTCTCCCTA  1581
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2517  AGATGGCCGGGTATCACCAGCAGGAGGTACTTTGGATGACAAACCAAAGGAACAACTGCAGAGGAGTCTCCCTA  2590

Query 1582  AAGCAACTGAGACAGACTGCAATGACAAATGCTCACACAACACCGAGGTCGGGGAGACGCGGAGCAGTACTCCA  1655
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2591  AAGCAACTGAGACAGACTGCAATGACAAATGCTCACACAACACCGAGGTCGGGGAGACGCGGAGCAGTACTCCA  2664

Query 1656  GAAATGCCTGCCGTGTCTGCGTTCTTTAGCCTCGCTGCGCTGGCTGAAGTGGCAGCCATGGAAAATGTGCACAG  1729
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2665  GAAATGCCTGCCGTGTCTGCGTTCTTTAGCCTCGCTGCGCTGGCTGAAGTGGCAGCCATGGAAAATGTGCACAG  2738

Query 1730  AGGTCAGAGGTCAACTCCGCTCACCCATGATGGACAGCCAAAAGAAATGCCGCAGGCTCCTGTACTTATTTCCT  1803
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2739  AGGTCAGAGGTCAACTCCGCTCACCCATGATGGACAGCCAAAAGAAATGCCGCAGGCTCCTGTACTTATTTCCT  2812

Query 1804  GCGCTGACCAGTGAAGCGCCCTTTCATTGTAAAACATTGTGCTTTACCTACTACCCTAGCCTTGTCTTTACCGA  1877
            |||||||||||                                                               
Sbjct 2813  GCGCTGACCAG---------------------------------------------------------------  2823

Query 1878  GGGATGC  1884
                   
Sbjct 2824  -------  2823

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