Nucleotide Global Alignment

Description

• Query: ccsbBroadEn_12351
• Subject: NM_001366782.1
• Aligned Length: 1540
• Identities: 227
• Gaps: 1313

Alignment

Query    1  ATGTTGCTAGAAAATCTAACTGATAATGAAAGTGAAAATACTAATCTTAAGAAGAAGGTATTTGAAAAGGAGGC  74
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGTTGCTAGAAAATCTAACTGATAATGAAAGTGAAAATACTAATCTTAAGAAGAAGGTATTTGAAAAGGAGGC  74

Query   75  CCATATCCAAGAACTTTCTTGTTTGTTTCAGAGTGA--------------------------------------  110
            ||||||||||||||||||||||||||||||||||||                                      
Sbjct   75  CCATATCCAAGAACTTTCTTGTTTGTTTCAGAGTGAAAAGGCAAATACTTTGAAAGCAAACCGTTTTTCCCAAT  148

Query  111  --------------------------------------------------------------------------  110
                                                                                      
Sbjct  149  CAGTAAAAGTAGTACATGAACGACTACAGATCCAAATTCATAAAAGGGAAGCCGAGAACGATAAGTTGAAAGAA  222

Query  111  -----AAAGAGCTTAGAAACCAAGATAGCCAAGTGGAACCTGCAATCAAGAATGAATAAGAATGAGGCTATAGT  179
                 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  TATGTAAAGAGCTTAGAAACCAAGATAGCCAAGTGGAACCTGCAATCAAGAATGAATAAGAATGAGGCTATAGT  296

Query  180  GATGAAAGAAGCAAGTAGGCAAAAAACTGTAGCTTTAAAAAAAGGCATC-------------------------  228
            |||||||||||||||||||||||||||||||||||| ||||||||||||                         
Sbjct  297  GATGAAAGAAGCAAGTAGGCAAAAAACTGTAGCTTT-AAAAAAGGCATCTAAAGTTTACAAACAAAGGCTTGAC  369

Query  229  --------------------------------------------------------------------------  228
                                                                                      
Sbjct  370  CATTTTACAGGAGCTATTGAAAAGCTTACTTCCCAAATTAGAGATCAGGAAGCCAAGTTGTCTGAAACAATTTC  443

Query  229  --------------------------------------------------------------------------  228
                                                                                      
Sbjct  444  AGCTTCCAATGCCTGGAAAAGTCATTATGAGAAAATTGTGATAGAAAAAACCGAATTGGAAGTACAGATTGAAA  517

Query  229  --------------------------------------------------------------------------  228
                                                                                      
Sbjct  518  CAATGAAAAAGCAAATCATTAATCTTTTGGAAGATCTGAAGAAAATGGAAGACCATGGAAAAAATTCATGTGAA  591

Query  229  --------------------------------------------------------------------------  228
                                                                                      
Sbjct  592  GAAATTCTTAGAAAAGTTCACTCAATTGAATATGAAAATGAAACTCTGAATCTTGAGAATACAAAATTAAAGAC  665

Query  229  --------------------------------------------------------------------------  228
                                                                                      
Sbjct  666  TACACTTGCTGCTTTGAAGGATGAAGTTGTATCTGTTGAAAATGAACTCTCAGAATTGCAAGAAGTAGAAAAAA  739

Query  229  --------------------------------------------------------------------------  228
                                                                                      
Sbjct  740  AACAGAAAACCCTTATTGAAATGTATAAAACTCAGGTACAAAAGTTGCAAGAAGCAGCTGAAATAGTAAAAAGC  813

Query  229  --------------------------------------------------------------------------  228
                                                                                      
Sbjct  814  AGATGTGAAAATTTGCTACATAAAAATAACCAAATAACAAAAACCAAAAATAAAAATGTAGAGAAGATGAGAGG  887

Query  229  --------------------------------------------------------------------------  228
                                                                                      
Sbjct  888  CCAGATGGAGTCTCATCTGAAGGAGTTAGAGCGTGTCTGCGATTCCTTGACGGCGGCGGAACGGAGGCTTCACG  961

Query  229  --------------------------------------------------------------------------  228
                                                                                      
Sbjct  962  AGTGTCAGGAGAGTCTGCAGTGCTGCAAGGGGAAGTGTGCAGACCAGGAACACACCATTAGGGAGCTTCAGGGC  1035

Query  229  --------------------------------------------------------------------------  228
                                                                                      
Sbjct 1036  CAGGTTGATGGAAATCACAATCTTCTGACAAAGCTTTCTCTGGAAGAGGAAAACTGTCTTATTCAGCTGAAGTG  1109

Query  229  --------------------------------------------------------------------------  228
                                                                                      
Sbjct 1110  TGAAAACCTTCAACAAAAATTAGAACAGATGGACGCAGAAAATAAAGAGCTTGAGAAGAAGCTGGCAAACCAAG  1183

Query  229  --------------------------------------------------------------------------  228
                                                                                      
Sbjct 1184  AAGAATGTCTTAAGCACAGCAATCTTAAGTTTAAAGAGAAATCTGCAGAGTATACAGCATTGGCCAGACAACTG  1257

Query  229  --------------------------------------------------------------------------  228
                                                                                      
Sbjct 1258  GAAGCTGCTTTAGAAGAAGGAAGACAAAAGGTTGCTGAAGAAATAGAGAAAATGTCATCTAGAGAGAGTGCTTT  1331

Query  229  --------------------------------------------------------------------------  228
                                                                                      
Sbjct 1332  ACAAATTAAAATATTAGATCTGGAAACTGAGCTTAGAAAGAAAAATGAAGAACAAAATCAACTTGTTTGCAAAA  1405

Query  229  --------------------------------------------------------------------------  228
                                                                                      
Sbjct 1406  TGAACAGTAAAGCACAACATCAGGAAGTGTGTTTGAAAGAAGTACAAAATAGTCTTGAGAAGTCGGAAAATCAA  1479

Query  229  ------------------------------------------------------------  228
                                                                        
Sbjct 1480  AATGAGAGTATTAAGAATTATTTACAGTTTCTTAAAACTTCTTATGTAACAATGTTTGAA  1539