Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_12355
- Subject:
- NM_028198.3
- Aligned Length:
- 3613
- Identities:
- 725
- Gaps:
- 2774
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGAGATGGAGCAAGTGAACGCGCTGTGCGAGGAGCTAGTGAAAGCGGTGACGGTCATGATGGACCCCAGCTC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TACCCAGCGCTACCGGCTGGAAGCCCTCAAGTTTTGTGAAGAGTTTAAAGAAAAATGCCCTATCTGTGTTCCAT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GTGGCTTGAAGTTGGCTGAAAAAACACAAATTGCCATCGTCAGACATTTTGGCCTTCAGATCCTGGAGCATGTT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GTCAAGTTTCGATGGAACAGCATGTCCCGATTGGAGAAGGTCTATCTGAAGAACAGTGTCATGGAGCTGATCGC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 AAATGGAACACTGAGGATTTTGGAGGAGGAGAACCACATTAAAGATGTTCTGTCTAGAATTGTGGTAGAGATGA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TCAAACGAGAGTGGCCACAGCACTGGCCTGACATGCTCATGGAGTTGGATACTCTCTTCAGGCAAGGGGAAACG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CAGAGGGAGTTGGTGATGTTCATCCTTCTCCGACTGGCCGAGGATGTAGTGACCTTTCAGACGCTCCCCACTCA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 AAGAAGAAGGGATATTCAGCAAACATTGACGCAGAACATGGAAAGAATCTTGAATTTTCTACTCAATACGCTTC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 AGGAAAATGTAAACAAGTACCAACAAATGAAGACAGATTCATCTCAGGAGGCAGAGGCTCAAGCCAACTGTCGA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GTAAGCGTGGCGGCCCTGAACACTCTAGCCGGCTACATTGACTGGGTATCTTTGAACCATATCACTGCCGAGAA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CTGTAAACTCGTGGAGACTCTGTGCCTGCTTCTCAATGAGCAGGAGCTGCAGTTGGGAGCCGCCGAGTGTCTGC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 TCATTGCAGTCAGCAGAAAAGGCAAGCTGGAGGACCGGAAGCGCTTGATGATCCTGTTTGGAGATGTCGCCATG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CATTATATTCTCTCGGCCGCACAGACTGCAGATGGAGGAGGCTTGGTCGAAAAACACTACCTCTTCCTGAAGAG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 ACTTTGTCAGGTGTTATGTGCACTGGGAAATCTGCTATGTGCACTGCTGGCCTTAGATGCTAACATACAAACAC 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CTATAAACTTTGGAATGTACCTGGAATCTTTTCTTGCTTTCACAACCCATCCAAGTCAGTTTTTACGCTCTTCA 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 ACCCATATGACGTGGGGAGCCCTCTTCAGGCATGAAGTTCTGTCCCGTGATCCGGCACTGTTAGCAGTAATACC 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 AAAATATCTTCGTGCTTCTATGACAAACTTGGTCAAGATGGGCTTTCCTTCTAAAACAGATAGCCCCAGCTGTG 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 AATATTCCCGATTTGATTTCGATAGTGATGAGGACTTCAATGCTTTCTTCAACTCCTCCCGAGCCCAGCATGGA 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 GAGGTGGTGAGGTGTGTGTGTCGACTGGATCCTAAGACTAGCTTCCAGATGGCGGCAGAATGGCTCAAGTATCA 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 GCTGTCAGCTTCTATTGACACTGGACCTGTGAACTCATGTTCTACAGCTGGAACTGGAGAGGGAGGCTTCTGCT 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 CCATCTTCTCACCTTCATATGTGCAGTGGGAAGCTATGACTTTTTTTTTGGAAAGTGTGATCAACCAGATGTTT 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 CGAACACTAGACAAAGAAGAGCTCCCGGTTAGTGATGGGATAGAGCTGCTGCAGCTGGTGTTGAACTTTGAAAT 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 CAAGGATCCCCTCGTCCTGTCCTGCGTCCTCACTAATGTCTCAGCGCTCTTCCCATTTGTCACATACAAGCCTG 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 CGTTCTTGCCCCAGGTCTTCTCTAAGCTCTTTTCATTTGTTACTTTTGAATCTGTTGGGGAAAGTAAGGCCCCC 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 AGGACTCGGGCAGTCAGGAATGTAAGGAGACATGCTTGTTCCTCCATCAACAAGATGTGTCGGGACTACCCAGA 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 CCTTGTTCTGCCCAATTTTGACATGCTTTATAGCCACGTGAAGCAACTCCTCTCCAATGAGCTCCTCCTGACCC 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 AGATGGAGAAGTGCGCCCTCATGGAAGCTCTGGTTCTCGTTAGCAACCAATTCAAGGATTATGAGCGGCAGAAG 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 TTATTCCTAGAGGAGCTGATGGCACCGGTGGTCAACATCTGGCTTTCTGAAGAAATGTGCAGAGCGCTGTCAGA 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 TATTGACTCCTTCATTGCCTATGTGGGTGCTGATCTGAAAAGCTGTGACCCAGCTGTGGAGGATCCATGTGGCT 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 TGAACCGTGCACGAATGAGCTTTTGTGTGTACAGCATCCTGGGGGTTATGAGACGCACTAGCTGGCCTTCCGAC 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 CTAGAAGAAGCCAAAGCTGGGGGCTTTGTGGTGGGCTACACACCCAGTGGAAATCCCATCTTCCGTAACCCCTG 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 CACAGAGCAGATCCTCAGACTTCTCGACAATTTGCTTGCCCTTGTAAGAACTCACAATACTTTATATACACCGG 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 AAATGCTAACGAAAATGGCAGAACCTTTCACCAAGGCTCTGGATATAGTTGAATCTGAAAAAACGGCAATATTA 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 GGATTACCTCAGCCTCTCTTGGAATTCAACGACCACCCTGTCTATAGAACCACTCTGGAGAGGATGCAGCGGTT 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 CTTTGGCATTCTCTATGAAAACTGTTACCATATCCTAGGGAAGGCAGGCCCTTCCATGCAGCAAGATTTCTACA 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 CTGTGGAGGACCTTGCTTCCCAGCTCCTTGGATCAGCTTTCGTCAACTTGAACAATATTCCTGACTTCCGGCTT 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 AGATCTATGCTTCGTGTCTTCGTGAAGCCCCTCGTGCTCTTCTGCCCCTCAGAACACTATGAAACCCTGATATC 2738
Query 1 ----------------------------------ATGAGGCTTTCTCAGAAATGGCAAGTTATCAACCAAAGGA 40
||||||||.||||||||.|||||.||.||||||||.||||
Sbjct 2739 TCCCATCCTTGGACCTCTCTTCACCTACCTCCACATGAGGCTCTCTCAGAAGTGGCATGTCATCAACCAGAGGA 2812
Query 41 GCCTGCTGTGTGGAGAAGATGAGGCTGCAGATGAAAACCCAGAGTCTCAAGAGATGCTGGAGGAGCAACTGGTG 114
||.|.||||||||||||||||||..||||||.||.|||||.||||||||.||.|||||.|||||.||.||||||
Sbjct 2813 GCATCCTGTGTGGAGAAGATGAGATTGCAGAGGACAACCCCGAGTCTCAGGAAATGCTCGAGGAACAGCTGGTG 2886
Query 115 AGGATGTTAACCCGAGAAGTCATGGACCTAATCACGGTTTGCTGTGTTTCAAAGAAGGGTGCTGACCACAGTAG 188
||||||.|.||||||||||.||||||||||||||.||.|||||||||.||.||||||..|||.||||||| .||
Sbjct 2887 AGGATGCTCACCCGAGAAGCCATGGACCTAATCATGGCTTGCTGTGTGTCGAAGAAGACTGCCGACCACA-CAG 2959
Query 189 -TGCTCCCCCAGCAGATGGAGACGATGAAGAAATGATGGCCACAGAGGTCACCCCCTCAGCTATGGCAGAGCTT 261
.||||||.|.|||||||||||.||||||||.|||||||||||.||.||..|||||||..||.|||..|||||.
Sbjct 2960 CCGCTCCCACTGCAGATGGAGATGATGAAGAGATGATGGCCACTGAAGTAGCCCCCTCGTCTGTGGTGGAGCTC 3033
Query 262 ACAGACCTGGGCAAATGTCTGATGAAGCATGAGGATGTTTGTACAGCGCTATTAATTACAGCCTTCAATTCCCT 335
|||||||||||||||||.||.||||||||.||||||||.||.|||||.||..||||.|||||.||.|||||.||
Sbjct 3034 ACAGACCTGGGCAAATGCCTCATGAAGCACGAGGATGTCTGCACAGCACTGCTAATCACAGCATTTAATTCTCT 3107
Query 336 GGCCTGGAAAGATACTCTGTCCTGCCAGAGGACAACCTCACAGCTCTGCTGGCCTCTCCTCAAACAAGTGCTGT 409
|.|||||||.||.||.|||||.|||||||||.|.|||.||||||||||||||||.|||||||||||.|||.|||
Sbjct 3108 GACCTGGAAGGACACACTGTCTTGCCAGAGGGCTACCACACAGCTCTGCTGGCCCCTCCTCAAACAGGTGATGT 3181
Query 410 CAGGGACACTGCTCGCAGATGCAGTTACGTGGCTTTTCACCAGTGTGCTGAAAGGCTTACAGATGCACGGGCAG 483
|.|||||.|||||||||||.||.||.||.||||||||||||||||||||||||||..|.|||||||||||||||
Sbjct 3182 CTGGGACCCTGCTCGCAGACGCTGTCACTTGGCTTTTCACCAGTGTGCTGAAAGGACTGCAGATGCACGGGCAG 3255
Query 484 CACGACGGGTGCATGGCTTCCCTGGTCCATCTGGCCTTCCAGATATACGAGGCACTGCGCCCCAGGTACCTGGA 557
|||||.|||||||||||||||||||||||..||||||||||||||||||||||.|||||||||||||||||.||
Sbjct 3256 CACGATGGGTGCATGGCTTCCCTGGTCCACTTGGCCTTCCAGATATACGAGGCGCTGCGCCCCAGGTACCTAGA 3329
Query 558 GATAAGAGCTGTAATGGAGCAAATCCCTGAAATACAGAAGGACTCACTGGACCAGTTTGACTGCAAGCTTTTAA 631
|||||||||.|||||||||||.||||||||||||.|.|||||.||.||||||||.|||||||||||||||||||
Sbjct 3330 GATAAGAGCAGTAATGGAGCAGATCCCTGAAATAAACAAGGAGTCTCTGGACCAATTTGACTGCAAGCTTTTAA 3403
Query 632 ACCCCTCCCTGCAGAAAGTGGCTGACAAGCGCCGAAAGGACCAATTCAAACGCCTCATTGCTGGTTGCATTGGG 705
||||||||||.||.||||..|||||.||.||.||.||||||||.||||||||.||.||.|||||.|||||||||
Sbjct 3404 ACCCCTCCCTTCAAAAAGCAGCTGATAAACGACGGAAGGACCACTTCAAACGTCTAATCGCTGGCTGCATTGGG 3477
Query 706 AAACCCTTGGGAGAGCAGTTCCGAAAAGAAGTTCACATTAAGAATCTTCCCTCACTTTTCAAAAAAACAAAGCC 779
||||||||||||||.|||||||||||||||||||||||||||||.|||||||..||||||||||||.|.||.||
Sbjct 3478 AAACCCTTGGGAGAACAGTTCCGAAAAGAAGTTCACATTAAGAACCTTCCCTGGCTTTTCAAAAAACCCAAACC 3551
Query 780 AATGCTGGAGACGGAGGTGCTGGACAATGATGGGGGTGGCCTGGCCACCATCTTTGAACCC 840
||||.|||||||.||.||||||||||.|||.|.||||||.|||||||||||||||||||||
Sbjct 3552 AATGTTGGAGACAGAAGTGCTGGACAGTGAGGAGGGTGGACTGGCCACCATCTTTGAACCC 3612
