Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_12396
- Subject:
- XM_011514770.1
- Aligned Length:
- 1927
- Identities:
- 835
- Gaps:
- 1055
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGTTTTCCAAGTCCGACCCACTGTGCGTCATGTATACCCAAGGGATGGAGAACAAGCAGTGGCGGGAGTTTGG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GCGCACCGAAGTCATCGACAACACGCTCAATCCTGACTTCGTGCGCAAGTTCATTGTGGATTACTTTTTCGAGG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AGAAGCAGAACCTCCGTTTTGATCTATACGACGTTGACTCTAAGAGTCCTGATTTATCCAAACACGATTTCCTG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GGCCAGGCCTTCTGCACCCTTGGAGAGATTGTGGGGTCCCCTGGGAGCCGCCTGGAAAAGCCCCTCACGATAGG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CGCATTCAGCCTGAATTCCAGGACGGGCAAACCCATGCCAGCTGTGTCCAACGGAAGTGGTCTTTGGATGGAAA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GTTTGAGAACCACTGGTCTGGAAGCCTCCGGTGGTGTCCCAGGAAAGAAATGTGGCACCATCATCCTGTCCGCT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GAGGAGCTCAGCAACTGTAGGGATGTCGCCACCATGCAGTTCTGTGCCAACAAGCTGGACAAGAAAGATTTCTT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TGGGAAATCTGACCCCTTCTTGGTATTCTACAGAAGCAACGAGGATGGAACGTTCACCATTTGCCACAAGACCG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 AGGTCATGAAGAACACCCTAAATCCAGTCTGGCAAACTTTCTCCATTCCCGTGAGAGCCCTCTGCAACGGCGAC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TACGATCGGACCATCAAGGTGGAGGTGTACGACTGGGATCGGGACGGCAGCCATGACTTCATTGGGGAGTTCAC 740
Query 1 -------------------------------------------------------------------------A 1
|
Sbjct 741 CACCAGTTACCGGGAGCTGGCCCGTGGGCAGAGCCAATTCAACATCTATGAGGTGGTAAACCCGAAAAAGAAAA 814
Query 2 TGAAGAAAAAGAAATACGTGAATTCTGGCACAGTCACCCTGCTTTCCTTTGCTGTGGAGTCAGAGTGCACCTTC 75
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 TGAAGAAAAAGAAATACGTGAATTCTGGCACAGTCACCCTGCTTTCCTTTGCTGTGGAGTCAGAGTGCACCTTC 888
Query 76 CTTGACTACATCAAAGGAGGGACCCAGATCAACTTCACTGTGGCCATTGATTTCACTGCCTCCAATGGGAACCC 149
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 CTTGACTACATCAAAGGAGGGACCCAGATCAACTTCACTGTGGCCATTGATTTCACTGCCTCCAATGGGAACCC 962
Query 150 CTCACAGTCCACATCCCTGCACTACATGAGCCCCTACCAGCTGAACGCCTACGCGCTGGCGCTGACTGCCGTCG 223
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 CTCACAGTCCACATCCCTGCACTACATGAGCCCCTACCAGCTGAACGCCTACGCGCTGGCGCTGACTGCCGTCG 1036
Query 224 GAGAGATCATCCAGCACTACGACAGTGACAAGATGTTCCCTGCCCTGGGCTTCGGGGCCAAGCTGCCCCCGGAT 297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 GAGAGATCATCCAGCACTACGACAGTGACAAGATGTTCCCTGCCCTGGGCTTCGGGGCCAAGCTGCCCCCGGAT 1110
Query 298 GGCAGAGTGTCCCACGAGTTCCCACTGAATGGCAACCAGGAGAACCCCTCATGCTGCGGCATCGACGGCATCCT 371
||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||
Sbjct 1111 GGCAGAGTGTCCCACGAGTTCCCACTGAATGGCAACCAGGAGAACCCCTCATGCTGTGGCATCGACGGCATCCT 1184
Query 372 GGAGGCCTACCACCGCAGCCTGCGCACTGTGCAGCTGTACGGCCCCACCAACTTTGCCCCCGTGGTCACCCACG 445
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 GGAGGCCTACCACCGCAGCCTGCGCACTGTGCAGCTGTACGGCCCCACCAACTTTGCCCCCGTGGTCACCCACG 1258
Query 446 TGGCCAGGAATGCAGCGGCCGTGCAGGATGGCTCCCAGTACTCGGTGCTGCTCATCATTACTGATGGGGTCATC 519
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 TGGCCAGGAATGCAGCGGCCGTGCAGGATGGCTCCCAGTACTCGGTGCTGCTCATCATTACTGATGGGGTCATC 1332
Query 520 TCGGACATGGCGCAGACCAAGGAGGCCATTGTCAACGCTGCCAAGCTCCCCATGTCCATCATTATCGTCGGCGT 593
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 TCGGACATGGCGCAGACCAAGGAGGCCATTGTCAACGCTGCCAAGCTCCCCATGTCCATCATTATCGTCGGCGT 1406
Query 594 GGGCCAGGCAGAGTTCGACGCCATGGTGGAGCTGGATGGCGACGACGTGCGGATCTCCTCCCGGGGGAAGCTGG 667
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 GGGCCAGGCAGAGTTCGACGCCATGGTGGAGCTGGATGGCGACGACGTGCGGATCTCCTCCCGGGGGAAGCTGG 1480
Query 668 CTGAACGCGACATCGTCCAG-------------TTTGTACCCTTCC----GGGA-------------------C 705
|||||||||||||||||||| .||| |||.|| |||| |
Sbjct 1481 CTGAACGCGACATCGTCCAGGTGAAGCCCAGGCCTTG---CCTGCCCCATGGGAAATTCAAGAGCCCCTCTAGC 1551
Query 706 TACGTGGACCGCACA-----------GGCAACCACGTGCTGAGCATGGCCC---------GC-CTG---GCCCG 755
.|.|.|||||.|||| |||..| |.||.||| |.||||| || ||| ||||.
Sbjct 1552 CAGGCGGACCTCACACCCCCTTTGGGGGCTTC--CCTGGTGA--AGGGCCCAGAAGGGAGGCACTGGGAGCCCC 1621
Query 756 AGACGTG---CTGGCA----------------GAGATC---CCT-GACCAACTGGTGT---------------- 790
| |.||| |.|.|| ||| || ||| |.||| ||.|||
Sbjct 1622 A-AAGTGGCCCAGCCACCACCGAAGGGAGTAGGAG-TCAGTCCTCGGCCA--TGCTGTGGTCTGGGCTGGGCCC 1691
Query 791 -CCT-----ACATGAAGGCACAGGG------------CATTCGCCCGCGTCCCCCACCCG----CAGCACCAAC 842
||| |||| |.||| |||| .||.||.|||..||.| ||| |||
Sbjct 1692 CCCTCTGTCACAT-------CTGGGACACACTCCTAACATT---GCGGGTGCCCAGCCAGAGGCCAG----AAC 1751
Query 843 CCACT---CGCCCTCGCAGTCCCCAGCCCGCACGCCCCCTG----------CGTCC-------------CCCCT 890
||.|| .||||| |||.|||||..|| |.||.||| |||.| |||||
Sbjct 1752 CCTCTGCCAGCCCT-----TCCTCAGCCTCCA-GGCCTCTGTGGTCAGCCTCGTTCTGGTTTTTTTCTGCCCCT 1819
Query 891 -----GCACACGCA------------------CATC-------------------------------------- 903
||..|.||| ||.|
Sbjct 1820 TGAAGGCTGAGGCAGTGTCTTTAGTGTTGCTGCAGCCTTCTCCAAGAATAGGCATTGCTCGGTTAACTGAATCA 1893
Query 904 --- 903
Sbjct 1894 ATG 1896
