Nucleotide Global Alignment

Description

• Query: ccsbBroadEn_12396
• Subject: XM_011514773.2
• Aligned Length: 1450
• Identities: 835
• Gaps: 578

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGCAGTTCTGTGCCAACAAGCTGGACAAGAAAGATTTCTTTGGGAAATCTGACCCCTTCTTGGTATTCTACAG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  AAGCAACGAGGATGGAACGTTCACCATTTGCCACAAGACCGAGGTCATGAAGAACACCCTAAATCCAGTCTGGC  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  AAACTTTCTCCATTCCCGTGAGAGCCCTCTGCAACGGCGACTACGATCGGACCATCAAGGTGGAGGTGTACGAC  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  TGGGATCGGGACGGCAGCCATGACTTCATTGGGGAGTTCACCACCAGTTACCGGGAGCTGGCCCGTGGGCAGAG  296

Query    1  ----------------------------------------ATGAAGAAAAAGAAATACGTGAATTCTGGCACAG  34
                                                    ||||||||||||||||||||||||||||||||||
Sbjct  297  CCAATTCAACATCTATGAGGTGGTAAACCCGAAAAAGAAAATGAAGAAAAAGAAATACGTGAATTCTGGCACAG  370

Query   35  TCACCCTGCTTTCCTTTGCTGTGGAGTCAGAGTGCACCTTCCTTGACTACATCAAAGGAGGGACCCAGATCAAC  108
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  TCACCCTGCTTTCCTTTGCTGTGGAGTCAGAGTGCACCTTCCTTGACTACATCAAAGGAGGGACCCAGATCAAC  444

Query  109  TTCACTGTGGCCATTGATTTCACTGCCTCCAATGGGAACCCCTCACAGTCCACATCCCTGCACTACATGAGCCC  182
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  TTCACTGTGGCCATTGATTTCACTGCCTCCAATGGGAACCCCTCACAGTCCACATCCCTGCACTACATGAGCCC  518

Query  183  CTACCAGCTGAACGCCTACGCGCTGGCGCTGACTGCCGTCGGAGAGATCATCCAGCACTACGACAGTGACAAGA  256
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  CTACCAGCTGAACGCCTACGCGCTGGCGCTGACTGCCGTCGGAGAGATCATCCAGCACTACGACAGTGACAAGA  592

Query  257  TGTTCCCTGCCCTGGGCTTCGGGGCCAAGCTGCCCCCGGATGGCAGAGTGTCCCACGAGTTCCCACTGAATGGC  330
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  TGTTCCCTGCCCTGGGCTTCGGGGCCAAGCTGCCCCCGGATGGCAGAGTGTCCCACGAGTTCCCACTGAATGGC  666

Query  331  AACCAGGAGAACCCCTCATGCTGCGGCATCGACGGCATCCTGGAGGCCTACCACCGCAGCCTGCGCACTGTGCA  404
            |||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  AACCAGGAGAACCCCTCATGCTGTGGCATCGACGGCATCCTGGAGGCCTACCACCGCAGCCTGCGCACTGTGCA  740

Query  405  GCTGTACGGCCCCACCAACTTTGCCCCCGTGGTCACCCACGTGGCCAGGAATGCAGCGGCCGTGCAGGATGGCT  478
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  GCTGTACGGCCCCACCAACTTTGCCCCCGTGGTCACCCACGTGGCCAGGAATGCAGCGGCCGTGCAGGATGGCT  814

Query  479  CCCAGTACTCGGTGCTGCTCATCATTACTGATGGGGTCATCTCGGACATGGCGCAGACCAAGGAGGCCATTGTC  552
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  CCCAGTACTCGGTGCTGCTCATCATTACTGATGGGGTCATCTCGGACATGGCGCAGACCAAGGAGGCCATTGTC  888

Query  553  AACGCTGCCAAGCTCCCCATGTCCATCATTATCGTCGGCGTGGGCCAGGCAGAGTTCGACGCCATGGTGGAGCT  626
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  AACGCTGCCAAGCTCCCCATGTCCATCATTATCGTCGGCGTGGGCCAGGCAGAGTTCGACGCCATGGTGGAGCT  962

Query  627  GGATGGCGACGACGTGCGGATCTCCTCCCGGGGGAAGCTGGCTGAACGCGACATCGTCCAG-------------  687
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||             
Sbjct  963  GGATGGCGACGACGTGCGGATCTCCTCCCGGGGGAAGCTGGCTGAACGCGACATCGTCCAGGTGAAGCCCAGGC  1036

Query  688  TTTGTACCCTTCC----GGGA-------------------CTACGTGGACCGCACA-----------GGCAACC  727
            .|||   |||.||    ||||                   |.|.|.|||||.||||           |||..| 
Sbjct 1037  CTTG---CCTGCCCCATGGGAAATTCAAGAGCCCCTCTAGCCAGGCGGACCTCACACCCCCTTTGGGGGCTTC-  1106

Query  728  ACGTGCTGAGCATGGCCC---------GC-CTG---GCCCGAGACGTG---CTGGCA----------------G  769
             |.||.|||  |.|||||         || |||   ||||.| |.|||   |.|.||                |
Sbjct 1107  -CCTGGTGA--AGGGCCCAGAAGGGAGGCACTGGGAGCCCCA-AAGTGGCCCAGCCACCACCGAAGGGAGTAGG  1176

Query  770  AGATC---CCT-GACCAACTGGTGT-----------------CCT-----ACATGAAGGCACAGGG--------  809
            || ||   ||| |.|||  ||.|||                 |||     ||||       |.|||        
Sbjct 1177  AG-TCAGTCCTCGGCCA--TGCTGTGGTCTGGGCTGGGCCCCCCTCTGTCACAT-------CTGGGACACACTC  1240

Query  810  ----CATTCGCCCGCGTCCCCCACCCG----CAGCACCAACCCACT---CGCCCTCGCAGTCCCCAGCCCGCAC  872
                ||||   .||.||.|||..||.|    |||    |||||.||   .|||||     |||.|||||..|| 
Sbjct 1241  CTAACATT---GCGGGTGCCCAGCCAGAGGCCAG----AACCCTCTGCCAGCCCT-----TCCTCAGCCTCCA-  1301

Query  873  GCCCCCTG----------CGTCC-------------CCCCT-----GCACACGCA------------------C  900
            |.||.|||          |||.|             |||||     ||..|.|||                  |
Sbjct 1302  GGCCTCTGTGGTCAGCCTCGTTCTGGTTTTTTTCTGCCCCTTGAAGGCTGAGGCAGTGTCTTTAGTGTTGCTGC  1375

Query  901  ATC-----------------------------------------  903
            |.|                                         
Sbjct 1376  AGCCTTCTCCAAGAATAGGCATTGCTCGGTTAACTGAATCAATG  1419