Nucleotide Global Alignment

Description

• Query: ccsbBroadEn_12408
• Subject: NM_001282591.1
• Aligned Length: 938
• Identities: 501
• Gaps: 424

Alignment

Query   1  ATGGCTGGTTCCCCAACATGCCTCACCCTCATCTATATCCTTTGGCAGCTCACAGGGTCAGCAGCCTCTGGACC  74
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||                    
Sbjct   1  ATGGCTGGTTCCCCAACATGCCTCACCCTCATCTATATCCTTTGGCAGCTCACA--------------------  54

Query  75  CGTGAAAGAGCTGGTCGGTTCCGTTGGTGGGGCCGTGACTTTCCCCCTGAAGTCCAAAGTAAAGCAAGTTGACT  148
                                                                                     
Sbjct  55  --------------------------------------------------------------------------  54

Query 149  CTATTGTCTGGACCTTCAACACAACCCCTCTTGTCACCATACAGCCAGAAGGGGGCACTATCATAGTGACCCAA  222
                                                                                     
Sbjct  55  --------------------------------------------------------------------------  54

Query 223  AATCGTAATAGGGAGAGAGTAGACTTCCCAGATGGAGGCTACTCCCTGAAGCTCAGCAAACTGAAGAAGAATGA  296
                                                                                     
Sbjct  55  --------------------------------------------------------------------------  54

Query 297  CTCAGGGATCTACTATGTGGGGATATACAGCTCATCACTCCAGCAGCCCTCCACCCAGGAGTACGTGCTGCATG  370
                                                                                     
Sbjct  55  --------------------------------------------------------------------------  54

Query 371  TCTACGAGCACCTGTCAAAGCCTAAAGTCACCATGGGTCTGCAGAGCAATAAGAATGGCACCTGTGTGACCAAT  444
                |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  55  -----GAGCACCTGTCAAAGCCTAAAGTCACCATGGGTCTGCAGAGCAATAAGAATGGCACCTGTGTGACCAAT  123

Query 445  CTGACATGCTGCATGGAACATGGGGAAGAGGATGTGATTTATACCTGGAAGGCCCTGGGGCAAGCAGCCAATGA  518
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 124  CTGACATGCTGCATGGAACATGGGGAAGAGGATGTGATTTATACCTGGAAGGCCCTGGGGCAAGCAGCCAATGA  197

Query 519  GTCCCATAATGGGTCCATCCTCCCCATCTCCTGGAGATGGGGAGAAAGTGATATGACCTTCATCTGCGTTGCCA  592
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 198  GTCCCATAATGGGTCCATCCTCCCCATCTCCTGGAGATGGGGAGAAAGTGATATGACCTTCATCTGCGTTGCCA  271

Query 593  GGAACCCTGTCAGCAGAAACTTCTCAAGCCCCATCCTTGCCAGGAAGCTCTGTGAAG-GTGC--TGCTGATGAC  663
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||.|  ||..|| || 
Sbjct 272  GGAACCCTGTCAGCAGAAACTTCTCAAGCCCCATCCTTGCCAGGAAGCTCTGTGAAGAGTACATTGAAGA-GA-  343

Query 664  CCAGATTCCTCCA-----TGGTCCTCCTGTGT-------CTCCT---GTTGGTGCCCCTCCTGCTCAGTCTCTT  722
             |||       |     |||   .|.|.|||       |||||   .|  .||||||       ||       
Sbjct 344  --AGA-------AGAGAGTGG---ACATTTGTCGGGAAACTCCTAACAT--ATGCCCC-------CA-------  389

Query 723  TGTACTGGGGCTATTTCTTTGGTTTCTGAAGAG---AGAGAG----------------ACAAGAAGAGAACAAT  777
                                  |||||.||||   |.||||                |||..||.||||||||
Sbjct 390  -----------------------TTCTGGAGAGAACACAGAGTACGACACAATCCCTCACACTAATAGAACAAT  440

Query 778  CCTAAAGGAAGATCCAGCAAATACGGTTTACTCCACTGTGGAAATACCGAAAAAGATGGAAAATCCCCACTCAC  851
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 441  CCTAAAGGAAGATCCAGCAAATACGGTTTACTCCACTGTGGAAATACCGAAAAAGATGGAAAATCCCCACTCAC  514

Query 852  TGCTCACGATGCCAGACACACCAAGGCTATTTGCCTA-------------  888
           |||||||||||||||||||||||||||||||||||||             
Sbjct 515  TGCTCACGATGCCAGACACACCAAGGCTATTTGCCTATGAGAATGTTATC  564