Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_12410
- Subject:
- NR_045546.1
- Aligned Length:
- 2697
- Identities:
- 1149
- Gaps:
- 1436
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AACCCTGAAGGGCAGACAGGAGGGGACGGGGCGCTGCGGTTCCTCGGCCGGGAGGGAACCCTGTGTGTGTCTCG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GGCTGTGTATGCGTGTGTATGTAGCGGGGAGCGAAGGATCGCTCTCAAGCAGCGGCCCAAGAGTCAGCGCCTCC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TCCTGAGAAACACCCGCGGGCGGAGAAGAAAGCGAGTGGGTATGTTGATGGGGGGCGGCCAAACTTCCTGTCCC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GCTCTGGAGCTGCTTCCGGCGGGAGCCGGAAGACGCCGTGTGTGGACGGGATTCGGGGCTGACTGACGGACGGA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CGGCTGCCCGAGACTGGAAGGTTAAATTGATTACCAACCTAGTTCAGCATCTTACAGGAAAAGTGTAATGCTTT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TTAAAGGGATATGAATATAACAGGAAGGTGTCATTGACTGAATTAGACTTGAACCTGTCCCTGATCAGCTACAG 444
Query 1 -------------------ATGTTATCAGATGAGTTAGAATCCAAACCAGAGCTCCTGGTACAGTTTGTTCAGA 55
|||||||||||||||||||||||||||||||||||||||||.|||||||||||||
Sbjct 445 GATTTCAGAAGCTGAATCAATGTTATCAGATGAGTTAGAATCCAAACCAGAGCTCCTGGTTCAGTTTGTTCAGA 518
Query 56 ATACGTCCATCCCATTGGGACAGGGGCTTGTAGAATCAGAAGCTAAAGATATTACTTGCTTGTCCCTCCTTCCC 129
||||.||||||||..|||||||.|||||.||||||||||||||||||||.|||||||||||.|||||||||||.
Sbjct 519 ATACCTCCATCCCCCTGGGACAAGGGCTAGTAGAATCAGAAGCTAAAGACATTACTTGCTTATCCCTCCTTCCA 592
Query 130 GTGACTGAAGCCTCAGAATGCAGTCGGCTAATGTTACCAGATGATACTACAAATCATTCTAACTCCTCCAAGGA 203
|||||.||.||||||||||||||.||.||||||||||| ||||
Sbjct 593 GTGACCGAGGCCTCAGAATGCAGCCGACTAATGTTACC--------------------------------AGGA 634
Query 204 GGTCCCTTCCTCAGCTGTTTTGAGAAGCCTTCGGGTGAATGTGGGTCCAGACGGAGAGGAGACGAGAGCTCAGA 277
|||||||||.||||||||||||||.|||||||.||||||||||||.|||||||||||.|||||.||.|||||||
Sbjct 635 GGTCCCTTCTTCAGCTGTTTTGAGGAGCCTTCAGGTGAATGTGGGCCCAGACGGAGAAGAGACAAGGGCTCAGA 708
Query 278 CTGTACAGAAATCCCCGGAGTTTTTGTCCACTTCAGAGTCTTCTAGCTTGTTGCAAGATCTACAGCCAAGTGAT 351
||||||||||.|||||.|||||..||.||||..|||||||..||||||||||||||||||||||||||||||||
Sbjct 709 CTGTACAGAAGTCCCCAGAGTTCCTGACCACACCAGAGTCGCCTAGCTTGTTGCAAGATCTACAGCCAAGTGAT 782
Query 352 AGCACTTCTTTTATTCTTCTTAACCTAACAAGAGCAGGTCTGGGCTCTTCAGCTGAGCACTTAGTGTTTGTACA 425
||||||||.||.||||||||.||||||||.||||||||.|||||||||||||||||||||||.||||||||.||
Sbjct 783 AGCACTTCCTTCATTCTTCTGAACCTAACGAGAGCAGGGCTGGGCTCTTCAGCTGAGCACTTTGTGTTTGTTCA 856
Query 426 GGATGAGGCAGAAGATTCAGGGAATGATTTCCTCTCCAGTGAGAGCACAGACAGTAGCATTCCATGGTTCCTCC 499
|||||||.||||.||.||||||..|||.||||||||...|||||||||||||||.||.||.|||||||||||||
Sbjct 857 GGATGAGACAGAGGACTCAGGGGCTGACTTCCTCTCTGCTGAGAGCACAGACAGCAGTATCCCATGGTTCCTCC 930
Query 500 GGGTTCAGGAGTTGGCCCATGACAGTTTGATTGCTGCTACTCGTGCACAACTGGCAAAGAATGCAAAAACCAGC 573
||||||||||..||||||||||||||.|||||||.||||||||||||||.|||||.||||||||||||||..||
Sbjct 931 GGGTTCAGGAACTGGCCCATGACAGTCTGATTGCGGCTACTCGTGCACAGCTGGCCAAGAATGCAAAAACTGGC 1004
Query 574 AGCAATGGAGAAAATGTCCACCTTGGTTCTGGTGATGGGCAGTCAAAAGATTCTGGGCCCCTTCCTCAAGTGGA 647
||||||||||||||||||||||||||.||||||||||||||..|||||||.|||||.|||||||||||||.|||
Sbjct 1005 AGCAATGGAGAAAATGTCCACCTTGGCTCTGGTGATGGGCAACCAAAAGACTCTGGTCCCCTTCCTCAAGCGGA 1078
Query 648 AAAGAAGCTCAAGTGTACAGTTGAAGGTTGTGACCGGACATTTGTATGGCCAGCTCACTTTAAATACCACCTCA 721
.||||||||||||||.|||||||||||.|||||||||||||||||.||||||||||||||.||.||||||||.|
Sbjct 1079 GAAGAAGCTCAAGTGCACAGTTGAAGGCTGTGACCGGACATTTGTGTGGCCAGCTCACTTCAAGTACCACCTTA 1152
Query 722 AGACTCATCGAAATGACCGCTCCTTCATCTGTCCTGCAGAAGGTTGTGGGAAAAGCTTCTATGTGCTGCAGAGG 795
|.|||||.||||||||.||||||||||||||.||||||||||||||||||||||||||.|||||||||||||||
Sbjct 1153 AAACTCACCGAAATGAGCGCTCCTTCATCTGCCCTGCAGAAGGTTGTGGGAAAAGCTTTTATGTGCTGCAGAGG 1226
Query 796 CTGAAGGTGCACATGAGGACCCACAATGGAGAGAAGCCCTTTATGTGCCATGAGTCTGGCTGTGGTAAGCAGTT 869
||||||||||||||||||||.||||||||.|||||.||||||||||||||.||||||||.||||||||||||||
Sbjct 1227 CTGAAGGTGCACATGAGGACACACAATGGGGAGAAACCCTTTATGTGCCACGAGTCTGGGTGTGGTAAGCAGTT 1300
Query 870 TACTACAGCTGGAAACCTGAAGAACCACCGGCGCATCCACACAGGAGAGAAACCTTTCCTTTGTGAAGCCCAAG 943
.|||||||||||.||||||||||||||||||||||||||||||||||||||.|||||.||.|||||||||||.|
Sbjct 1301 CACTACAGCTGGGAACCTGAAGAACCACCGGCGCATCCACACAGGAGAGAAGCCTTTTCTCTGTGAAGCCCAGG 1374
Query 944 GATGTGGCCGTTCCTTTGCTGAGTATTCTAGCCTCCGAAAACATCTGGTGGTTCACTCAGGAGAGAAGCCTCAT 1017
||||||||||||||||||||||||||||.||||||||.|||||||||||.|||||||||||.||||||||||||
Sbjct 1375 GATGTGGCCGTTCCTTTGCTGAGTATTCAAGCCTCCGGAAACATCTGGTAGTTCACTCAGGTGAGAAGCCTCAT 1448
Query 1018 CAGTGCCAAGTCTGTGGGAAGACCTTCTCTCAGAGTGGAAGCAGGAATGTGCATATGAGAAAGCATCACCTGCA 1091
||||||||.|||||||||||||||||||||||||||||.||.|||||||||||||||||||||||||||.||||
Sbjct 1449 CAGTGCCAGGTCTGTGGGAAGACCTTCTCTCAGAGTGGGAGTAGGAATGTGCATATGAGAAAGCATCACTTGCA 1522
Query 1092 GCTGGGAGCAGCTGGGAGTCAAGAGCAGGAGCAAAC-------------------------------------- 1127
||||||..||.|||||||||||||.|||||.|||||
Sbjct 1523 GCTGGGGACAACTGGGAGTCAAGAACAGGATCAAACCGCCGAGCCACTAATGGGCAGTAGTTTGCTTGAAGACG 1596
Query 1128 -------------------------------------------------------------------------- 1127
Sbjct 1597 CTTCAGTTCCCAATAAAAACCTGGTGTCTATGAATTCCCAGTCCAGCCTTGGTGGAGAGTCCTTGAATCTATCA 1670
Query 1128 -----------------------------TGAGGTGCTTGCTGAAGGATCCCCACGTTCCCTGTCTTCAGTGCC 1172
||||||||||.|||||.||.||.||||..||||||||||.|||||
Sbjct 1671 AATACCAATTCTATCCTTGGAGTTGATGATGAGGTGCTTACTGAAAGAGCCTCACGGCCCCTGTCTTCTGTGCC 1744
Query 1173 TGATGTGACACATCACCTGGTGACCATGCAGTCAGGGAGGCAATCATATGAAGTTTCTGTCTTAACTGCAGTAA 1246
||||||||||||||||.|||||||||||||||||||||||||.||.|||||||||||||||||||||||.||||
Sbjct 1745 TGATGTGACACATCACTTGGTGACCATGCAGTCAGGGAGGCAGTCCTATGAAGTTTCTGTCTTAACTGCGGTAA 1818
Query 1247 ATCCACAAGAGTTACTAAACCAAGGAGATTTAACTGAAAGACGGACA--------------------------- 1293
||||.||.||||||||||||||||||||||||||||||||||.||||
Sbjct 1819 ATCCGCAGGAGTTACTAAACCAAGGAGATTTAACTGAAAGACAGACATGAGTGTGCTGACTCCTGGAGATGCTG 1892
Query 1294 -------------------------------------------------------------------------- 1293
Sbjct 1893 TTGTCTGATCCCAGAGTGCATGATGGGAACAGATCCAAAGGCTCATAATCTGCCAGAACTAAAAGGAGTCTGAA 1966
Query 1294 -------------------------------------------------------------------------- 1293
Sbjct 1967 GGACCAAGACCTTGCCTTGCCTCTGTTGTCTGAGGGCTCTCTTCAACCTCCACCGATGCAGTCCAAGAGTGAAG 2040
Query 1294 -------------------------------------------------------------------------- 1293
Sbjct 2041 CAGTGGCCGTGGGCTGGATACCTGTGCCGCCTCTCTCCTCAGCGCAGCGTTTGGGAGTAGACTTGCCAAGAGCA 2114
Query 1294 -------------------------------------------------------------------------- 1293
Sbjct 2115 GGTTTAATTATGTGTTGGCTGAAGATTTTCATTGTGACTGTCAAGGTTTTCCTTTGAAGAGTTTTCACCCTAGG 2188
Query 1294 -------------------------------------------------------------------------- 1293
Sbjct 2189 CCCAGCTATCTTTCCATATGGTTGAATTATGTCCTGCTTCCAACCAGAACACTGAGTTTTCAAGATGCCTTGTT 2262
Query 1294 -------------------------------------------------------------------------- 1293
Sbjct 2263 GCTTTGAAGAAGGGAGGGGTGCCAATTACACTGTAGCATTGCACTCTCCCTTTAGCAACCTGAGTAAGACTTAG 2336
Query 1294 -------------------------------------------------------------------------- 1293
Sbjct 2337 CCTTTGGGCTGTAAAAATTAAATTACTTGAATCTCTCCTTGGCCCAGGCTGAGGTACCAACTTACCCTGTACAC 2410
Query 1294 -------------------------------------------------------------------------- 1293
Sbjct 2411 TTTGACTTGGTCATTTTTTTGTTTTGTTTATGGGACTTAAAATAGCATGTTATCAGGGGGTTTTATTTGTTGTT 2484
Query 1294 -------------------------------------------------------------------------- 1293
Sbjct 2485 GTTGTTTTTTTTTAAGTTAAAAACCACATGATCTAGAGTTTGTTTTCCTTTTAAATAAACAAAACAACCTAGTC 2558
Query 1294 -------------------------------------------------------------------------- 1293
Sbjct 2559 ACCTCTTTGGCTCTTGTTTTAGATTGGTGATTCTTAACCTTCTCAATGCTGCCACCCTTTAATGCAGTTTCTCA 2632
Query 1294 --------------------------------- 1293
Sbjct 2633 TGTTGTGGTGACCCCCAACCATAAGATGATTTT 2665
