Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_12439
- Subject:
- XM_006522871.3
- Aligned Length:
- 3423
- Identities:
- 1779
- Gaps:
- 1395
Alignment
Query 1 ATGGCTGAAGATGGGAGCGAAGAGATCATGTTCATCTGGTGTGAAGACTGCAGCCAGTACCACGACTCCGAATG 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 TCCCGAGCTGGGCCCAGTGGTCATGGTCAAAGACTCCTTTGTGTTAAGCAGGGCAAGGTCATCCCTTCCTCCCA 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 ACTTGGAGATCAGACGACTGGAAGATGGAGCCGAGGGGGTGTTCGCCATCACTCAGCTCGTCAAGCGGACACAG 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 TTCGGTCCCTTTGAGTCCAGGAGGGTCGCCAAATGGGAAAAGGAGTCTGCATTTCCCCTGAAGGTGTTCCAGAA 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 GGACGGGCACCCCGTGTGCTTCGACACCTCCAACGAGGATGACTGCAACTGGATGATGCTGGTGCGGCCAGCGG 370
Sbjct 1 -------------------------------------------------------------------------- 0
Query 371 CGGAGGCCGAGCACCAGAACCTGACGGCCTACCAGCACGGCAGCGACGTGTACTTCACCACCTCCAGAGACATC 444
Sbjct 1 -------------------------------------------------------------------------- 0
Query 445 CCCCCGGGTACCGAGCTGCGCGTGTGGTATGCGGCCTTCTATGCCAAGAAGATGGACAAGCCCATGCTGAAGCA 518
Sbjct 1 -------------------------------------------------------------------------- 0
Query 519 GGCCGGCTCTGGCGTCCACGCTGCAGGCACCCCAGAAAACAGCGCCCCCGTGGAGTCGGAACCCAGCCAGTGGG 592
Sbjct 1 -------------------------------------------------------------------------- 0
Query 593 CGTGTAAAGTGTGTTCTGCCACCTTCCTGGAGCTGCAGCTCCTCAATGAACATCTGTTGGGCCACTTAGAACAA 666
Sbjct 1 -------------------------------------------------------------------------- 0
Query 667 GCCAAAAGCCTTCCTCCAGGCAGCCAAAGCGAGGCAGCAGCTCCCGAGAAGGAGCAGGACACACCCCGGGGGGA 740
Sbjct 1 -------------------------------------------------------------------------- 0
Query 741 ACCCCCTGCAGTGCCCGAGAGCGAGAATGTTGCCACCAAAGAACAGAAGAAAAAGCCTCGAAGGGGGAGAAAAC 814
Sbjct 1 -------------------------------------------------------------------------- 0
Query 815 CCAAAGTGTCCAAAGCTGAGCAGCCTCTAGTCATCGTGGAAGACAAGGAACCCACAGAGCAAGTGGCAGAGATC 888
Sbjct 1 -------------------------------------------------------------------------- 0
Query 889 ATTACCGAGGTCCCTCCGGATGAGCCTGTGAGTGCAACGCCAGATGAGCGGATCATGGAGCTGGTTCTGGGGAA 962
Sbjct 1 -------------------------------------------------------------------------- 0
Query 963 GCTGGCCACCACCACCACTGACACCAGCTCGGTTCCAAAGTTCACCCATCATCAGAATAACACCATCACGCTCA 1036
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1037 AGAGGAGCTTAATTCTCTCAAGCAGACACGGCATCCGGCGCAAGGTCATCAAACAGCTCGGGGAGCACAAGCGG 1110
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1111 GTTTACCAGTGCAATATCTGCAGCAAGATCTTCCAGAACAGCAGCAACCTGAGCAGGCACGTGCGCTCGCATGG 1184
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1185 TGACAAGCTGTTTAAGTGCGAAGAGTGTGCAAAATTGTTCAGCCGCAAAGAGAGCCTAAAGCAGCACGTTTCCT 1258
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1259 ACAAGCACAGCAGGAACGAGGTGGACGGCGAGTACAGGTACCGCTGCGGCACTTGTGAGAAGACCTTCCGCATC 1332
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1333 GAGAGCGCGCTGGAGTTCCACAACTGCAGGACAGATGACAAGACGTTCCAATGTGAGATGTGTTTCAGATTCTT 1406
|||||||||||||||||
Sbjct 1 ---------------------------------------------------------ATGTGTTTCAGATTCTT 17
Query 1407 CTCCACCAACAGCAACCTCTCCAAGCACAAGAAGAAGCACGGCGACAAGAAGTTTGCCTGTGAGGTCTGCAGCA 1480
|||||||||||||||||||||.||||||||||||||.||.||.|||||||||||||||||||||||||||||.|
Sbjct 18 CTCCACCAACAGCAACCTCTCTAAGCACAAGAAGAAACATGGGGACAAGAAGTTTGCCTGTGAGGTCTGCAGTA 91
Query 1481 AGATGTTCTACCGCAAGGACGTCATGCTGGACCACCAGCGCCGGCACCTGGAAGGAGTGCGGCGAGTGAAGCGA 1554
|||||||||||||||||||.||.|||||||||||||||.|.||.|||.||||.||.||||||||.||||||.||
Sbjct 92 AGATGTTCTACCGCAAGGATGTTATGCTGGACCACCAGAGGCGACACTTGGATGGTGTGCGGCGGGTGAAGAGA 165
Query 1555 GAGGACCTGGAGGCCGGTGGGGAGAACCTGGTCCGTTACAAGAAGGAGCCTTCCGGGTGCCCGGTGTGTGGCAA 1628
||.|||.||||||||.|.|||||.|.||||||.||||||||||||||.|||||.||.|||||.|||||||||||
Sbjct 166 GAAGACTTGGAGGCCAGCGGGGAAAGCCTGGTTCGTTACAAGAAGGAACCTTCTGGATGCCCAGTGTGTGGCAA 239
Query 1629 GGTGTTCTCCTGCCGGAGCAATATGAACAAGCACCTGCTCACCCACGGCGACAAGAAGTACACCTGCGAGATCT 1702
||||||||||||.||||||||.|||||||||||||||||.||||||||.|||||||||||||||||||||||||
Sbjct 240 GGTGTTCTCCTGTCGGAGCAACATGAACAAGCACCTGCTGACCCACGGTGACAAGAAGTACACCTGCGAGATCT 313
Query 1703 GCGGGCGCAAGTTCTTCCGCGTGGATGTGCTCAGGGACCACATCCATGTCCACTTCAAGGACATCGCGTTGATG 1776
|.|||||||||||||||||.|||||.||.|||||||||||||||||||||||||||||||||||||||.|.|||
Sbjct 314 GTGGGCGCAAGTTCTTCCGAGTGGACGTACTCAGGGACCACATCCATGTCCACTTCAAGGACATCGCGCTAATG 387
Query 1777 GATGACCACCAGAGGGAAGAGTTTATCGGCAAGATCGGGATCTCCTCGGAAGAAAACGATGACAATTCTGACGA 1850
||||||||||||.||||.|||||.||.|||||.||.|||||||||||.||.||.||.||||||||.|||||.||
Sbjct 388 GATGACCACCAGCGGGAGGAGTTCATTGGCAAAATTGGGATCTCCTCAGAGGAGAATGATGACAACTCTGATGA 461
Query 1851 GAGCGCAGACTCGGAGCCTCACAAGTACAGCTGCAAGCGGTGCCAGCTCACCTTCGGCCGGGGGAAGGAGTACC 1924
||||||||||||.|||||.||||||||||||||||||.|||||||||||||.||||||||.||||||||.||||
Sbjct 462 GAGCGCAGACTCTGAGCCACACAAGTACAGCTGCAAGAGGTGCCAGCTCACTTTCGGCCGTGGGAAGGAATACC 535
Query 1925 TGAAGCACATCATGGAGGTGCACAAGGAGAAGGGCTATGGCTGCAGCATCTGCAACCGGCGCTTTGCACTGAAG 1998
|||||||||||||||||||||||||||||||||||.|.|||||||||||||||.||||.|||||.|||||.|||
Sbjct 536 TGAAGCACATCATGGAGGTGCACAAGGAGAAGGGCCACGGCTGCAGCATCTGCCACCGACGCTTCGCACTCAAG 609
Query 1999 GCCACCTACCACGCCCACATGGTCATCCACCGTGAAAACCTGCCGGACCCCAACGTGCAGAAGTACATCCACCC 2072
|||||||||||.||||||||||||||||||||.||.||||||||.|||||||||||||||||||||||.|||||
Sbjct 610 GCCACCTACCATGCCCACATGGTCATCCACCGGGAGAACCTGCCTGACCCCAACGTGCAGAAGTACATTCACCC 683
Query 2073 CTGCGAGATCTGCGGGCGGATCTTCAACAGCATCGGGAACCTGGAGCGCCACAAGCTCATCCACACAGGTGTGA 2146
|||.||||||||.|||.||||.|||||||||||.||||||.|||||||||||||.|||||||||||||||||||
Sbjct 684 CTGTGAGATCTGTGGGAGGATATTCAACAGCATTGGGAACTTGGAGCGCCACAAACTCATCCACACAGGTGTGA 757
Query 2147 AGAGCCACGCCTGCGAGCAGTGTGGGAAGTCCTTTGCCAGGAAGGACATGCTGAAGGAGCACATGCGTGTGCAC 2220
|.|||||||||||.|||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||.
Sbjct 758 AAAGCCACGCCTGTGAGCAGTGTGGGAAGTCCTTTGCCAGGAAGGACATGCTGAAAGAGCACATGCGTGTGCAT 831
Query 2221 GACAACGTCCGCGAGTACCTGTGTGCCGAGTGTGGGAAAGGCATGAAGACCAAGCACGCGCTGCGCCACCACAT 2294
||||||.||||.|||||||||||.|||||||||||||||||.||||||||||||||.||.|||||||||||.||
Sbjct 832 GACAACATCCGGGAGTACCTGTGCGCCGAGTGTGGGAAAGGTATGAAGACCAAGCATGCACTGCGCCACCATAT 905
Query 2295 GAAGCTGCACAAGGGCATCAAGGAGTACGAGTGCAAGGAGTGCCACCGCAGGTTCGCGCAGAAGGTCAACATGC 2368
||||||||||||.||||||||||||||.|||||||||||.||.|||||||.|||.||.||||||||||||||||
Sbjct 906 GAAGCTGCACAAAGGCATCAAGGAGTATGAGTGCAAGGAATGTCACCGCAAGTTTGCACAGAAGGTCAACATGC 979
Query 2369 TCAAGCACTGCAAGCGGCACACGGGGATTAAAGATTTCATGTGTGAATTGTGTGGGAAGACATTCAGCGAGAGG 2442
|||||||||.|||.||||||||.||.||||||||.||||||||||||||||||||||||||||||||.||||||
Sbjct 980 TCAAGCACTACAAACGGCACACAGGAATTAAAGACTTCATGTGTGAATTGTGTGGGAAGACATTCAGTGAGAGG 1053
Query 2443 AACACCATGGAGACCCACAAGCTCATCCACACAGTGGGCAAGCAGTGGACGTGCTCCGTGTGCGACAAGAAGTA 2516
|||||.||||||||.||||||||||||||||||||.||||||||||||||.||.||||||||.|||||||||||
Sbjct 1054 AACACAATGGAGACACACAAGCTCATCCACACAGTAGGCAAGCAGTGGACTTGTTCCGTGTGTGACAAGAAGTA 1127
Query 2517 CGTGACCGAGTACATGCTGCAGAAGCACGTTCAGCTCACACACGACAAGGTGGAGGCGCAGAGCTGCCAGCTGT 2590
|||.||.|||||||||||.|||||.|||||.||||||||.||.|||||||||||.||.|||||.|||||.||.|
Sbjct 1128 CGTCACAGAGTACATGCTTCAGAAACACGTCCAGCTCACTCATGACAAGGTGGAAGCACAGAGTTGCCAACTAT 1201
Query 2591 GCGGGACCAAGGTGTCCACCAGGGCCTCCATGAGCCGACACATGCGGCGCAAGCACCCCGAGGTGCTCGCGGTG 2664
|.||.|||||.|||||.|||.||||||||||||||.||||.|||||.|||||||||||||||||.|||||.||.
Sbjct 1202 GTGGCACCAAAGTGTCAACCCGGGCCTCCATGAGCAGACATATGCGACGCAAGCACCCCGAGGTCCTCGCTGTT 1275
Query 2665 AGGATCGATGACCTGGACCACCTCCCGGAGACCACCACCATCGACGCCTCCTCCATTGGCATCGTCCAGCCTGA 2738
.||||.||.||.||||||||||||||.|||||||||||||||||.||.||.|||||.|||||.||||||||||.
Sbjct 1276 CGGATTGACGATCTGGACCACCTCCCCGAGACCACCACCATCGATGCATCTTCCATCGGCATTGTCCAGCCTGC 1349
Query 2739 GCTGACTCTGGAGCAGGAGGATTTGGCCGAAGGGAAGCACGGGAAAGCTGCCAAGCGAAGTCACAAGAGAAAGC 2812
||||...|||||||||||.||..||||.|||||.|||||.||.||.|||||||||||.||.|||||||||||||
Sbjct 1350 GCTGGGCCTGGAGCAGGAAGAACTGGCAGAAGGTAAGCATGGAAAGGCTGCCAAGCGCAGCCACAAGAGAAAGC 1423
Query 2813 AGAAGCCAGAAGAGGAGGCGGGTGCTCCGGTGCCCGAGGACGCCACCTTCAGCGAATACTCAGAGAAAGAGACG 2886
||||||||||.||.|||||.||.|||||.|||||.|||||..||||||||||.||||||.|.||.||.|||.|.
Sbjct 1424 AGAAGCCAGAGGAAGAGGCAGGGGCTCCAGTGCCTGAGGATACCACCTTCAGTGAATACCCCGAAAAGGAGCCA 1497
Query 2887 GAGTTCACAGGCAGTGTAGGCGACGAGACCAATTCCGCAGTACAGAGCATTCAGCAGGTAGTGGTGACCCTGGG 2960
|||||||||||||||||.||.||||||||.|||||.||.||||||||.||.||.|||||.|||||||||||.||
Sbjct 1498 GAGTTCACAGGCAGTGTGGGTGACGAGACAAATTCTGCTGTACAGAGTATCCAACAGGTGGTGGTGACCCTAGG 1571
Query 2961 TGACCCAAATGTGACCACACCATCGAGCTCAGTCGGCTTGACCAACATCACCGTGACCCCCATCACCACTGCGG 3034
.|||||.||||||||..|.|||||.||||||||.||..|.||||||||||||||||||||||||||||||||.|
Sbjct 1572 GGACCCCAATGTGACTGCTCCATCAAGCTCAGTTGGTCTAACCAACATCACCGTGACCCCCATCACCACTGCAG 1645
Query 3035 CCGCGACTCAGTTTACCAATCTCCAGCCGGTGGCCGTGGGGCACCTTACCACCCCTGAACGCCAGTTACAGCTG 3108
|.|..|||||||||||||||.|.|||||.|||||.||.||.||.|||||||.||||||.||||||.|||||||.
Sbjct 1646 CTGGAACTCAGTTTACCAATTTACAGCCAGTGGCTGTTGGACATCTTACCAACCCTGATCGCCAGCTACAGCTA 1719
Query 3109 GACAACTCAATCCTGACCGTGACCTTTGATACCGTCAGCGGCTCTGCCATGTTGCACAACCGCCAAAATGACGT 3182
||.|||||.||||||||.||||||||||||||.|||||.|||||.|||||||||||||||||.||||||||.||
Sbjct 1720 GATAACTCCATCCTGACTGTGACCTTTGATACTGTCAGTGGCTCCGCCATGTTGCACAACCGGCAAAATGATGT 1793
Query 3183 CCAGATCCACCCCCAGCCGGAAGCCTCGAACCCACAGTCTGTGGCCCATTTCATCAACCTGACGACCCTGGTCA 3256
||||||||||||.|||||.||||||.|.|||||.|||||.||||||||.||.||||||||.||.||.|||||.|
Sbjct 1794 CCAGATCCACCCACAGCCAGAAGCCACAAACCCTCAGTCAGTGGCCCACTTTATCAACCTTACCACACTGGTAA 1867
Query 3257 ACTCCATCACGCCCCTGGGGAGCCAGCTTAGTGACCAGCACCCGCTCACGTGGCGGGCAGTGCCCCAGACTGAC 3330
||||||||||.|||.||||||.|||.||.|||||.||||||||.|||||.|||||.||||||||||||||.||.
Sbjct 1868 ACTCCATCACACCCTTGGGGAACCAACTCAGTGAGCAGCACCCACTCACCTGGCGAGCAGTGCCCCAGACAGAT 1941
Query 3331 GTCTTGCCACCCCCGCAGCCGCAGGCACCCCCACAGCAGGCGGCCCAGCCCCAGGTGCAGGCGGAGCAGCAGCA 3404
||..|||..||.||.|||.|.|..|||.||||.||||||||||..||.||||||||.| ||.|..||||
Sbjct 1942 GTGCTGCAGCCGCCACAGGCCCCTGCAGCCCCGCAGCAGGCGGTGCAACCCCAGGTAC------AGAATGAGCA 2009
Query 3405 GCAGCAGATGTACAGCTAC 3423
|||||||||||||||||||
Sbjct 2010 GCAGCAGATGTACAGCTAC 2028
