Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_12439
- Subject:
- XM_006522872.2
- Aligned Length:
- 3423
- Identities:
- 1691
- Gaps:
- 1488
Alignment
Query 1 ATGGCTGAAGATGGGAGCGAAGAGATCATGTTCATCTGGTGTGAAGACTGCAGCCAGTACCACGACTCCGAATG 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 TCCCGAGCTGGGCCCAGTGGTCATGGTCAAAGACTCCTTTGTGTTAAGCAGGGCAAGGTCATCCCTTCCTCCCA 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 ACTTGGAGATCAGACGACTGGAAGATGGAGCCGAGGGGGTGTTCGCCATCACTCAGCTCGTCAAGCGGACACAG 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 TTCGGTCCCTTTGAGTCCAGGAGGGTCGCCAAATGGGAAAAGGAGTCTGCATTTCCCCTGAAGGTGTTCCAGAA 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 GGACGGGCACCCCGTGTGCTTCGACACCTCCAACGAGGATGACTGCAACTGGATGATGCTGGTGCGGCCAGCGG 370
Sbjct 1 -------------------------------------------------------------------------- 0
Query 371 CGGAGGCCGAGCACCAGAACCTGACGGCCTACCAGCACGGCAGCGACGTGTACTTCACCACCTCCAGAGACATC 444
Sbjct 1 -------------------------------------------------------------------------- 0
Query 445 CCCCCGGGTACCGAGCTGCGCGTGTGGTATGCGGCCTTCTATGCCAAGAAGATGGACAAGCCCATGCTGAAGCA 518
Sbjct 1 -------------------------------------------------------------------------- 0
Query 519 GGCCGGCTCTGGCGTCCACGCTGCAGGCACCCCAGAAAACAGCGCCCCCGTGGAGTCGGAACCCAGCCAGTGGG 592
Sbjct 1 -------------------------------------------------------------------------- 0
Query 593 CGTGTAAAGTGTGTTCTGCCACCTTCCTGGAGCTGCAGCTCCTCAATGAACATCTGTTGGGCCACTTAGAACAA 666
Sbjct 1 -------------------------------------------------------------------------- 0
Query 667 GCCAAAAGCCTTCCTCCAGGCAGCCAAAGCGAGGCAGCAGCTCCCGAGAAGGAGCAGGACACACCCCGGGGGGA 740
Sbjct 1 -------------------------------------------------------------------------- 0
Query 741 ACCCCCTGCAGTGCCCGAGAGCGAGAATGTTGCCACCAAAGAACAGAAGAAAAAGCCTCGAAGGGGGAGAAAAC 814
Sbjct 1 -------------------------------------------------------------------------- 0
Query 815 CCAAAGTGTCCAAAGCTGAGCAGCCTCTAGTCATCGTGGAAGACAAGGAACCCACAGAGCAAGTGGCAGAGATC 888
Sbjct 1 -------------------------------------------------------------------------- 0
Query 889 ATTACCGAGGTCCCTCCGGATGAGCCTGTGAGTGCAACGCCAGATGAGCGGATCATGGAGCTGGTTCTGGGGAA 962
Sbjct 1 -------------------------------------------------------------------------- 0
Query 963 GCTGGCCACCACCACCACTGACACCAGCTCGGTTCCAAAGTTCACCCATCATCAGAATAACACCATCACGCTCA 1036
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1037 AGAGGAGCTTAATTCTCTCAAGCAGACACGGCATCCGGCGCAAGGTCATCAAACAGCTCGGGGAGCACAAGCGG 1110
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1111 GTTTACCAGTGCAATATCTGCAGCAAGATCTTCCAGAACAGCAGCAACCTGAGCAGGCACGTGCGCTCGCATGG 1184
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1185 TGACAAGCTGTTTAAGTGCGAAGAGTGTGCAAAATTGTTCAGCCGCAAAGAGAGCCTAAAGCAGCACGTTTCCT 1258
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1259 ACAAGCACAGCAGGAACGAGGTGGACGGCGAGTACAGGTACCGCTGCGGCACTTGTGAGAAGACCTTCCGCATC 1332
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1333 GAGAGCGCGCTGGAGTTCCACAACTGCAGGACAGATGACAAGACGTTCCAATGTGAGATGTGTTTCAGATTCTT 1406
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1407 CTCCACCAACAGCAACCTCTCCAAGCACAAGAAGAAGCACGGCGACAAGAAGTTTGCCTGTGAGGTCTGCAGCA 1480
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1481 AGATGTTCTACCGCAAGGACGTCATGCTGGACCACCAGCGCCGGCACCTGGAAGGAGTGCGGCGAGTGAAGCGA 1554
|||||||||||||||||.||.|||||||||||||||.|.||.|||.||||.||.||||||||.||||||.||
Sbjct 1 --ATGTTCTACCGCAAGGATGTTATGCTGGACCACCAGAGGCGACACTTGGATGGTGTGCGGCGGGTGAAGAGA 72
Query 1555 GAGGACCTGGAGGCCGGTGGGGAGAACCTGGTCCGTTACAAGAAGGAGCCTTCCGGGTGCCCGGTGTGTGGCAA 1628
||.|||.||||||||.|.|||||.|.||||||.||||||||||||||.|||||.||.|||||.|||||||||||
Sbjct 73 GAAGACTTGGAGGCCAGCGGGGAAAGCCTGGTTCGTTACAAGAAGGAACCTTCTGGATGCCCAGTGTGTGGCAA 146
Query 1629 GGTGTTCTCCTGCCGGAGCAATATGAACAAGCACCTGCTCACCCACGGCGACAAGAAGTACACCTGCGAGATCT 1702
||||||||||||.||||||||.|||||||||||||||||.||||||||.|||||||||||||||||||||||||
Sbjct 147 GGTGTTCTCCTGTCGGAGCAACATGAACAAGCACCTGCTGACCCACGGTGACAAGAAGTACACCTGCGAGATCT 220
Query 1703 GCGGGCGCAAGTTCTTCCGCGTGGATGTGCTCAGGGACCACATCCATGTCCACTTCAAGGACATCGCGTTGATG 1776
|.|||||||||||||||||.|||||.||.|||||||||||||||||||||||||||||||||||||||.|.|||
Sbjct 221 GTGGGCGCAAGTTCTTCCGAGTGGACGTACTCAGGGACCACATCCATGTCCACTTCAAGGACATCGCGCTAATG 294
Query 1777 GATGACCACCAGAGGGAAGAGTTTATCGGCAAGATCGGGATCTCCTCGGAAGAAAACGATGACAATTCTGACGA 1850
||||||||||||.||||.|||||.||.|||||.||.|||||||||||.||.||.||.||||||||.|||||.||
Sbjct 295 GATGACCACCAGCGGGAGGAGTTCATTGGCAAAATTGGGATCTCCTCAGAGGAGAATGATGACAACTCTGATGA 368
Query 1851 GAGCGCAGACTCGGAGCCTCACAAGTACAGCTGCAAGCGGTGCCAGCTCACCTTCGGCCGGGGGAAGGAGTACC 1924
||||||||||||.|||||.||||||||||||||||||.|||||||||||||.||||||||.||||||||.||||
Sbjct 369 GAGCGCAGACTCTGAGCCACACAAGTACAGCTGCAAGAGGTGCCAGCTCACTTTCGGCCGTGGGAAGGAATACC 442
Query 1925 TGAAGCACATCATGGAGGTGCACAAGGAGAAGGGCTATGGCTGCAGCATCTGCAACCGGCGCTTTGCACTGAAG 1998
|||||||||||||||||||||||||||||||||||.|.|||||||||||||||.||||.|||||.|||||.|||
Sbjct 443 TGAAGCACATCATGGAGGTGCACAAGGAGAAGGGCCACGGCTGCAGCATCTGCCACCGACGCTTCGCACTCAAG 516
Query 1999 GCCACCTACCACGCCCACATGGTCATCCACCGTGAAAACCTGCCGGACCCCAACGTGCAGAAGTACATCCACCC 2072
|||||||||||.||||||||||||||||||||.||.||||||||.|||||||||||||||||||||||.|||||
Sbjct 517 GCCACCTACCATGCCCACATGGTCATCCACCGGGAGAACCTGCCTGACCCCAACGTGCAGAAGTACATTCACCC 590
Query 2073 CTGCGAGATCTGCGGGCGGATCTTCAACAGCATCGGGAACCTGGAGCGCCACAAGCTCATCCACACAGGTGTGA 2146
|||.||||||||.|||.||||.|||||||||||.||||||.|||||||||||||.|||||||||||||||||||
Sbjct 591 CTGTGAGATCTGTGGGAGGATATTCAACAGCATTGGGAACTTGGAGCGCCACAAACTCATCCACACAGGTGTGA 664
Query 2147 AGAGCCACGCCTGCGAGCAGTGTGGGAAGTCCTTTGCCAGGAAGGACATGCTGAAGGAGCACATGCGTGTGCAC 2220
|.|||||||||||.|||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||.
Sbjct 665 AAAGCCACGCCTGTGAGCAGTGTGGGAAGTCCTTTGCCAGGAAGGACATGCTGAAAGAGCACATGCGTGTGCAT 738
Query 2221 GACAACGTCCGCGAGTACCTGTGTGCCGAGTGTGGGAAAGGCATGAAGACCAAGCACGCGCTGCGCCACCACAT 2294
||||||.||||.|||||||||||.|||||||||||||||||.||||||||||||||.||.|||||||||||.||
Sbjct 739 GACAACATCCGGGAGTACCTGTGCGCCGAGTGTGGGAAAGGTATGAAGACCAAGCATGCACTGCGCCACCATAT 812
Query 2295 GAAGCTGCACAAGGGCATCAAGGAGTACGAGTGCAAGGAGTGCCACCGCAGGTTCGCGCAGAAGGTCAACATGC 2368
||||||||||||.||||||||||||||.|||||||||||.||.|||||||.|||.||.||||||||||||||||
Sbjct 813 GAAGCTGCACAAAGGCATCAAGGAGTATGAGTGCAAGGAATGTCACCGCAAGTTTGCACAGAAGGTCAACATGC 886
Query 2369 TCAAGCACTGCAAGCGGCACACGGGGATTAAAGATTTCATGTGTGAATTGTGTGGGAAGACATTCAGCGAGAGG 2442
|||||||||.|||.||||||||.||.||||||||.||||||||||||||||||||||||||||||||.||||||
Sbjct 887 TCAAGCACTACAAACGGCACACAGGAATTAAAGACTTCATGTGTGAATTGTGTGGGAAGACATTCAGTGAGAGG 960
Query 2443 AACACCATGGAGACCCACAAGCTCATCCACACAGTGGGCAAGCAGTGGACGTGCTCCGTGTGCGACAAGAAGTA 2516
|||||.||||||||.||||||||||||||||||||.||||||||||||||.||.||||||||.|||||||||||
Sbjct 961 AACACAATGGAGACACACAAGCTCATCCACACAGTAGGCAAGCAGTGGACTTGTTCCGTGTGTGACAAGAAGTA 1034
Query 2517 CGTGACCGAGTACATGCTGCAGAAGCACGTTCAGCTCACACACGACAAGGTGGAGGCGCAGAGCTGCCAGCTGT 2590
|||.||.|||||||||||.|||||.|||||.||||||||.||.|||||||||||.||.|||||.|||||.||.|
Sbjct 1035 CGTCACAGAGTACATGCTTCAGAAACACGTCCAGCTCACTCATGACAAGGTGGAAGCACAGAGTTGCCAACTAT 1108
Query 2591 GCGGGACCAAGGTGTCCACCAGGGCCTCCATGAGCCGACACATGCGGCGCAAGCACCCCGAGGTGCTCGCGGTG 2664
|.||.|||||.|||||.|||.||||||||||||||.||||.|||||.|||||||||||||||||.|||||.||.
Sbjct 1109 GTGGCACCAAAGTGTCAACCCGGGCCTCCATGAGCAGACATATGCGACGCAAGCACCCCGAGGTCCTCGCTGTT 1182
Query 2665 AGGATCGATGACCTGGACCACCTCCCGGAGACCACCACCATCGACGCCTCCTCCATTGGCATCGTCCAGCCTGA 2738
.||||.||.||.||||||||||||||.|||||||||||||||||.||.||.|||||.|||||.||||||||||.
Sbjct 1183 CGGATTGACGATCTGGACCACCTCCCCGAGACCACCACCATCGATGCATCTTCCATCGGCATTGTCCAGCCTGC 1256
Query 2739 GCTGACTCTGGAGCAGGAGGATTTGGCCGAAGGGAAGCACGGGAAAGCTGCCAAGCGAAGTCACAAGAGAAAGC 2812
||||...|||||||||||.||..||||.|||||.|||||.||.||.|||||||||||.||.|||||||||||||
Sbjct 1257 GCTGGGCCTGGAGCAGGAAGAACTGGCAGAAGGTAAGCATGGAAAGGCTGCCAAGCGCAGCCACAAGAGAAAGC 1330
Query 2813 AGAAGCCAGAAGAGGAGGCGGGTGCTCCGGTGCCCGAGGACGCCACCTTCAGCGAATACTCAGAGAAAGAGACG 2886
||||||||||.||.|||||.||.|||||.|||||.|||||..||||||||||.||||||.|.||.||.|||.|.
Sbjct 1331 AGAAGCCAGAGGAAGAGGCAGGGGCTCCAGTGCCTGAGGATACCACCTTCAGTGAATACCCCGAAAAGGAGCCA 1404
Query 2887 GAGTTCACAGGCAGTGTAGGCGACGAGACCAATTCCGCAGTACAGAGCATTCAGCAGGTAGTGGTGACCCTGGG 2960
|||||||||||||||||.||.||||||||.|||||.||.||||||||.||.||.|||||.|||||||||||.||
Sbjct 1405 GAGTTCACAGGCAGTGTGGGTGACGAGACAAATTCTGCTGTACAGAGTATCCAACAGGTGGTGGTGACCCTAGG 1478
Query 2961 TGACCCAAATGTGACCACACCATCGAGCTCAGTCGGCTTGACCAACATCACCGTGACCCCCATCACCACTGCGG 3034
.|||||.||||||||..|.|||||.||||||||.||..|.||||||||||||||||||||||||||||||||.|
Sbjct 1479 GGACCCCAATGTGACTGCTCCATCAAGCTCAGTTGGTCTAACCAACATCACCGTGACCCCCATCACCACTGCAG 1552
Query 3035 CCGCGACTCAGTTTACCAATCTCCAGCCGGTGGCCGTGGGGCACCTTACCACCCCTGAACGCCAGTTACAGCTG 3108
|.|..|||||||||||||||.|.|||||.|||||.||.||.||.|||||||.||||||.||||||.|||||||.
Sbjct 1553 CTGGAACTCAGTTTACCAATTTACAGCCAGTGGCTGTTGGACATCTTACCAACCCTGATCGCCAGCTACAGCTA 1626
Query 3109 GACAACTCAATCCTGACCGTGACCTTTGATACCGTCAGCGGCTCTGCCATGTTGCACAACCGCCAAAATGACGT 3182
||.|||||.||||||||.||||||||||||||.|||||.|||||.|||||||||||||||||.||||||||.||
Sbjct 1627 GATAACTCCATCCTGACTGTGACCTTTGATACTGTCAGTGGCTCCGCCATGTTGCACAACCGGCAAAATGATGT 1700
Query 3183 CCAGATCCACCCCCAGCCGGAAGCCTCGAACCCACAGTCTGTGGCCCATTTCATCAACCTGACGACCCTGGTCA 3256
||||||||||||.|||||.||||||.|.|||||.|||||.||||||||.||.||||||||.||.||.|||||.|
Sbjct 1701 CCAGATCCACCCACAGCCAGAAGCCACAAACCCTCAGTCAGTGGCCCACTTTATCAACCTTACCACACTGGTAA 1774
Query 3257 ACTCCATCACGCCCCTGGGGAGCCAGCTTAGTGACCAGCACCCGCTCACGTGGCGGGCAGTGCCCCAGACTGAC 3330
||||||||||.|||.||||||.|||.||.|||||.||||||||.|||||.|||||.||||||||||||||.||.
Sbjct 1775 ACTCCATCACACCCTTGGGGAACCAACTCAGTGAGCAGCACCCACTCACCTGGCGAGCAGTGCCCCAGACAGAT 1848
Query 3331 GTCTTGCCACCCCCGCAGCCGCAGGCACCCCCACAGCAGGCGGCCCAGCCCCAGGTGCAGGCGGAGCAGCAGCA 3404
||..|||..||.||.|||.|.|..|||.||||.||||||||||..||.||||||||.| ||.|..||||
Sbjct 1849 GTGCTGCAGCCGCCACAGGCCCCTGCAGCCCCGCAGCAGGCGGTGCAACCCCAGGTAC------AGAATGAGCA 1916
Query 3405 GCAGCAGATGTACAGCTAC 3423
|||||||||||||||||||
Sbjct 1917 GCAGCAGATGTACAGCTAC 1935
