Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_12459
- Subject:
- XM_017318293.1
- Aligned Length:
- 2000
- Identities:
- 751
- Gaps:
- 1123
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGAAACTTGTATGGCCTAGCGCTAAGCTGTTGCAGGCAGCTGCAGGTGCGTCTGCCCGGGCCTGTGAGCACCT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CACCAGCAACGTGCTTCCCTTGCTGCTGGAACAGTTCCACAAGCACAGCCAGAGCAACCAGCGTCGGACAATCC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TTGAAATGATCCTGGGATTCCTAAAGCTACAGCAGAAATGGAGCTATGAAGACAGAGATGAAAGGCCTCTGAGT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AGCTTCAAAGACCAGCTATGCTCATTGGTGTTCATGGCTCTAACAGACCCCAGCACCCAGCTTCAGCTTGTTGG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CATCCGGACGCTCACAGTCTTGGGTGCCCAGCCAGGTCTCCTGTCTGCTGAGGACTTGGAGCTGGCAGTAGGTC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 ACCTGTACCGACTGACCTTCCTGGAGGAAGATTCCCAGAGTTGTAGGGTGGCCGCACTGGAGGCATCAGGAACC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CTGGCCACTCTGTATCCTGGAGCCTTCAGCAGACACTTGCTCCCCAAGCTTGCTGAGGAGCTGCATAAAGGGGA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GTCAGATGTGGCTAGAGCAGATGGTCCCACCAAATGTTCCCGGCATTTCCGCTGTCTGCAAGCTTTGTCAGCTG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TTTCAACACATCCCAGCATTGTCAAGGAGACACTGCCTCTGCTACTGCAGCATCTCTGTCAAGCAAACAAAGGG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 AATATGGTTACAGAGTCCAGTGAAGTTGTTGCTGTCTGTCAGAGTCTCCAGCAGGTGGCAGAAAAATGCCAGCA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GGACCCTGAGAGCTACTGGTATTTCCACAAGACAGCTGTACCCTGCCTGTTTGCATTGGCTGTGCAGGCTTCAA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 TGCCAGAGAAGGAATCCTCAGTTCTGAGAAAAGTACTGTTGGAGGATGAGGTCTTGGCTGCGTTGGCATCTGTC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 ATTGGCACTGCCACTACCCATCTGAGCCCTGAACTAGCTGCCCAGAGCGTCACATGCATCGTGCCCCTCTTCTT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 AGATGGCAACACTTCCTTTCTACCTGAAAACAGCTTCCCTGACCAGTTCCAGCCGTTCCAGGATGGCTCCTCTG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 GGCAGAGGCGGCTGGTTGCACTACTTACGGCTTTTGTCTGCTCCCTGCCACGAAATGTGGAAATCCCTCAGCTG 1110
Query 1 ---------ATGCGGGAGCTTTTGGAACTGAGCTGCTGCCACAGCTGCCCCTTTTCTTCCACCGCTGCTGCCAA 65
|||||||||||||||.|.|.||||||..||||||||||.||.||.||.|||||.||.||..|.||
Sbjct 1111 AACCGACTCATGCGGGAGCTTTTGAAGCAGAGCTGTGGCCACAGCTGTCCTTTCTCCTCCACTGCCGCCACTAA 1184
Query 66 GTGCTTTGCAGGACTCCTCAACAAGCACCCTGCAGGGCAGCAGCTGGATGAATTCCTACAGCTAGCTGTGGACA 139
||||||||||||.||||||||||||||.|||.|||||||||||.||||.||.|||||.|||||.|||||||.||
Sbjct 1185 GTGCTTTGCAGGGCTCCTCAACAAGCAGCCTCCAGGGCAGCAGTTGGAGGAGTTCCTCCAGCTCGCTGTGGGCA 1258
Query 140 AAGTGGAGGCTGGCCTGGGCTCTGGGCCCTGTCGTAGTCAGGCCTTCACTCTTCTTCTCTGGGTAACAAAGGCC 213
.|||||||||.|||||||.|||||...|||..|||..||||||.|||||.||.||.|||||||||||.|||||.
Sbjct 1259 CAGTGGAGGCGGGCCTGGCCTCTGAATCCTCCCGTGATCAGGCTTTCACACTGCTGCTCTGGGTAACCAAGGCT 1332
Query 214 CTAGTGCTCAGATACCATCCTCTCAGCTCCTGCCTTACAGCCCGGCTCATGGGCCTCCTGAGTGACCCAGAATT 287
|||||.||||||||||||||||||||..|||||||.||..|||||||||||||||||||.|||||.||||||.|
Sbjct 1333 CTAGTCCTCAGATACCATCCTCTCAGTGCCTGCCTGACCACCCGGCTCATGGGCCTCCTCAGTGATCCAGAACT 1406
Query 288 AGGTCCAGCAGCAGCTGATGGCTTCTCTCTGCTCATGTCTGACTGCACTGATGTGCTGACTCGTGCTGGCCATG 361
.||....||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||.|||||||
Sbjct 1407 TGGCTGTGCAGCAGCTGATGGCTTCTCTCTGCTCATGTCTGACTGCACTGATGTGTTGACTCGTGCCGGCCATG 1480
Query 362 CTGAAGTGCGGATCATGTTCCGCCAGCGGTTCTTCACAGATAATGTGCCTGCTTTGGTCCAGGGCTTCCATGCT 435
||||.||.||||||||||||||||||||||||||||||||.||||||||||||||||||||.||.||||||||.
Sbjct 1481 CTGATGTTCGGATCATGTTCCGCCAGCGGTTCTTCACAGACAATGTGCCTGCTTTGGTCCAAGGTTTCCATGCC 1554
Query 436 GCTCCCCAAGATGTGAAGCCAAACTACTTGAAGGGTCTTTCTCATGTACTTAACAGGCTGCCCAAGCCTGTACT 509
||||||||||||||||||||||||||..||||||||||.|||||.|||||.||||||||||||||||||||.||
Sbjct 1555 GCTCCCCAAGATGTGAAGCCAAACTATCTGAAGGGTCTGTCTCACGTACTCAACAGGCTGCCCAAGCCTGTGCT 1628
Query 510 CTTGCCAGAGCTGCCCACGCTTCTTTCCTTGCTGCTGGAGGCCCTGTCCTGCCCTGACTGTGTGGTGCAGCTCT 583
.||.||||||||||||||.||||||||||||||||||||.||..|.|||||||||||||.||||||.|||||.|
Sbjct 1629 TTTACCAGAGCTGCCCACACTTCTTTCCTTGCTGCTGGAAGCATTATCCTGCCCTGACTCTGTGGTCCAGCTTT 1702
Query 584 CCACCCTCAGCTGCCTTCAGCCTCTTCTACTGGAAGCACCCCAAGTCATGAGTCTTCACGTGGACACCCTCGTC 657
||||.||.|||||.||.||.||.||.||||||||||||||.|||.|||||||||||||.||.|||||.||.||.
Sbjct 1703 CCACTCTGAGCTGTCTCCAACCCCTACTACTGGAAGCACCTCAAATCATGAGTCTTCATGTTGACACTCTGGTT 1776
Query 658 ACCAAGTTTCTGAACCTCAGCTCTAGCCCTTCCATGGCTGTCCGGATCGCCGCACTGCAGTGCATGCATGCTCT 731
||.||.||.||||||||||||||.||....||.||||||||||||||.||.||.||||||||.|||||.|||||
Sbjct 1777 ACAAAATTCCTGAACCTCAGCTCCAGTTACTCAATGGCTGTCCGGATTGCTGCTCTGCAGTGTATGCACGCTCT 1850
Query 732 CACTCGCCTGCCCACCCCTGTGCTGCTGCCGTACAAACCACAGGTGATTCGGGCCTTAGCCAAACCCCTGGATG 805
|||||||||.|||||..|||||||.|||||.||||||.|.|||||.||.||.|||||||||||.||.|||||.|
Sbjct 1851 CACTCGCCTCCCCACTTCTGTGCTACTGCCATACAAATCTCAGGTCATCCGAGCCTTAGCCAAGCCTCTGGACG 1924
Query 806 ACAAGAAGAGACTGGTGCGCAAGGAAGCAGTGTCAGCCAGAGGGGAG--TGGTTTCTGTTGGGGAGCCCTGGCA 877
|||||||||||||.|||||.||||||||||||||||| |||||||| |||||.||..|.||||||||.||.|
Sbjct 1925 ACAAGAAGAGACTTGTGCGAAAGGAAGCAGTGTCAGC--GAGGGGAGAATGGTTCCTACTTGGGAGCCCGGGGA 1996
Query 878 GC 879
||
Sbjct 1997 GC 1998
