Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_12486
Subject:
XR_376354.3
Aligned Length:
1442
Identities:
517
Gaps:
870

Alignment

Query    1  ---------------------------------------------ATGGCGATGCACAACAAGGCGGCGCCGCC  29
                                                         ||||||||||||||||||.||||||||||
Sbjct    1  CCTACTGGTCGCGCGCCGCCGCCTCCGCCGCCGCTTGAGCCCAACATGGCGATGCACAACAAGACGGCGCCGCC  74

Query   30  GCAGATCCCGGACACCCGGCGGGAGCTGGCGGAGCTCGTGAAGCGGAAGCAGGAGCTGGCGGAAACATTGGCAA  103
            |||||||||.||||||||||||||||||||.|||||.||.|||||||||||||||||||||||||||.|.||||
Sbjct   75  GCAGATCCCAGACACCCGGCGGGAGCTGGCCGAGCTGGTTAAGCGGAAGCAGGAGCTGGCGGAAACACTTGCAA  148

Query  104  ATTTGGAGCGACAGATCTATGCTTTTGAGGGAAGCTACCTGGAAGACACTCAGATGTATGGCAATATTATTCGT  177
            |.||||||.|||||||.|||||||||||.|||||||||||||||||||||||||||||||||||||||||.|||
Sbjct  149  ACTTGGAGAGACAGATATATGCTTTTGAAGGAAGCTACCTGGAAGACACTCAGATGTATGGCAATATTATCCGT  222

Query  178  GGCTGGGATCGGTATCTGACCAACCAAAAAAACTCCAATAGCAAAAATGATCGAAGGAACCGGAAGTTTAAGGA  251
            |||||||||||||||.|||||||.|||||.|||||||||||||||||.||.||.||||||||||||||.|||||
Sbjct  223  GGCTGGGATCGGTATTTGACCAATCAAAAGAACTCCAATAGCAAAAACGACCGGAGGAACCGGAAGTTCAAGGA  296

Query  252  AGCTGAGCGGCTCTTCAGTAAATCCTCGGTTACCTCAGCAGCTGCAGTAAGTGCATTGGCAGGAGTTCAGGACC  325
            .||.||.|||||||||||.||||||||.||.||.||.||.||||||||||||||.||||||||.||||||||||
Sbjct  297  GGCCGAACGGCTCTTCAGCAAATCCTCAGTCACGTCGGCTGCTGCAGTAAGTGCCTTGGCAGGGGTTCAGGACC  370

Query  326  AGCTCATTGAAAAGAGGGAGCCAGGAAGTGGGACGGAAAGTGACACTTCTCCAGACTTCCACAATCAGGAAAAT  399
            |||||||.|||||||||||.||||||||||||||||||||.||.|||||||||||||||||||||||||||||.
Sbjct  371  AGCTCATCGAAAAGAGGGAACCAGGAAGTGGGACGGAAAGCGATACTTCTCCAGACTTCCACAATCAGGAAAAC  444

Query  400  GAGCCCAGC-CAGGAGGACCCTGAGGATCTGGATGGATCTGTGCAGGGAGTGAAACCTCAGAAGGCTGCTTCTT  472
            ||| ||.|| |||||||||||.|||||.||.||.||.||.||.||||||||||||||||||||.||.||.||||
Sbjct  445  GAG-CCTGCGCAGGAGGACCCCGAGGACCTAGACGGCTCCGTCCAGGGAGTGAAACCTCAGAAAGCCGCCTCTT  517

Query  473  CTACTTCCTCAGGGAGTCACCACAGCAGCCATAAAAAGCGAAAGAATAAAAACCGGCAC---------------  531
            |.||.||||||||.||.||||||||||||||.|||||.||.||||||||||||||||||               
Sbjct  518  CCACCTCCTCAGGAAGCCACCACAGCAGCCACAAAAAACGGAAGAATAAAAACCGGCACAGGTATGTATATTAG  591

Query  532  -------------------------------------------AGGATTGATCTGAAGTTAAACAAAAAACCAC  562
                                                       ||||||||||||||||||||||||||.||.|
Sbjct  592  GTTAGGCTGGGAAGTTTTTTTTAAAAACAGAAAAACGTGATGGAGGATTGATCTGAAGTTAAACAAAAAGCCCC  665

Query  563  GAGCTGACTAT---------------------------------------------------------------  573
            |||||||||||                                                               
Sbjct  666  GAGCTGACTATTAGAAGACTTGCTGGCAGAAGCTTCCAGGCTGTGAAGCTTCCCCTCTGACCTCACAGCCACAA  739

Query  574  --------------------------------------------------------------------------  573
                                                                                      
Sbjct  740  ATGTCCCTTGCCTGACTGTGGCCATCTGCCTCTGCCCCCCAGACCCAGTGCCTGTGACTGGCTAGTCTGACCTA  813

Query  574  --------------------------------------------------------------------------  573
                                                                                      
Sbjct  814  ACTGTAGTGACAAGTCCTCCCTATAAGACTTTTTGGGTCATTCGCTGCTGTCGTCATCATTAGTAGAACAGCGG  887

Query  574  --------------------------------------------------------------------------  573
                                                                                      
Sbjct  888  GAAGACCTGTCCTCCGTCCCAGTCCCTGCGGGTGGCTAACTGTGCATTTCTCCCTTCTTAGAATGAATGTCTCC  961

Query  574  --------------------------------------------------------------------------  573
                                                                                      
Sbjct  962  CCCCAAACTGGCTGGCACCAGCTCCATCTGTGACACCCCCGCCCCCATCGAGAAGTGCACACACCTCTGATTCT  1035

Query  574  --------------------------------------------------------------------------  573
                                                                                      
Sbjct 1036  GTGTTAAGCTGAAAGTAGAACCCAAGGTCCATTGCAGATGGAGGCTGTAAATATCTGCCATTCTCTTGTTTTGT  1109

Query  574  --------------------------------------------------------------------------  573
                                                                                      
Sbjct 1110  TTTGTGTTGTATTGTTTTTTTATTGTTGCTTTTACCATCTGATTTTCTTTTGGGACATTTTGTGATGCCTGTAC  1183

Query  574  --------------------------------------------------------------------------  573
                                                                                      
Sbjct 1184  CTTCCTGATGACACATCTGATCGTCTGTTTCATGTGGTGTCGATATTCATAACTGAAACTAAAGTGGCTTTTAG  1257

Query  574  --------------------------------------------------------------------------  573
                                                                                      
Sbjct 1258  AAGGAAATGGGCAGCTGCCTCTTTGGCTTCTTGATTTCTTCAGGGGGAAGGGAGAGAGTGTTTTCACGGTGGAT  1331

Query  574  --------------------------------------------------------------------------  573
                                                                                      
Sbjct 1332  GGCCTATCAGGAACAGTTTTATGTGGGAGGAACAAGAAGCTAAACAGCACACGTTGAAACCCTCCCATTGGAGT  1405

Query  574  ------------------------------------  573
                                                
Sbjct 1406  AGACTCTTTGTAGGAATAAAATCTCCCTGGCTCGCC  1441