Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_12486
- Subject:
- XR_376354.3
- Aligned Length:
- 1442
- Identities:
- 517
- Gaps:
- 870
Alignment
Query 1 ---------------------------------------------ATGGCGATGCACAACAAGGCGGCGCCGCC 29
||||||||||||||||||.||||||||||
Sbjct 1 CCTACTGGTCGCGCGCCGCCGCCTCCGCCGCCGCTTGAGCCCAACATGGCGATGCACAACAAGACGGCGCCGCC 74
Query 30 GCAGATCCCGGACACCCGGCGGGAGCTGGCGGAGCTCGTGAAGCGGAAGCAGGAGCTGGCGGAAACATTGGCAA 103
|||||||||.||||||||||||||||||||.|||||.||.|||||||||||||||||||||||||||.|.||||
Sbjct 75 GCAGATCCCAGACACCCGGCGGGAGCTGGCCGAGCTGGTTAAGCGGAAGCAGGAGCTGGCGGAAACACTTGCAA 148
Query 104 ATTTGGAGCGACAGATCTATGCTTTTGAGGGAAGCTACCTGGAAGACACTCAGATGTATGGCAATATTATTCGT 177
|.||||||.|||||||.|||||||||||.|||||||||||||||||||||||||||||||||||||||||.|||
Sbjct 149 ACTTGGAGAGACAGATATATGCTTTTGAAGGAAGCTACCTGGAAGACACTCAGATGTATGGCAATATTATCCGT 222
Query 178 GGCTGGGATCGGTATCTGACCAACCAAAAAAACTCCAATAGCAAAAATGATCGAAGGAACCGGAAGTTTAAGGA 251
|||||||||||||||.|||||||.|||||.|||||||||||||||||.||.||.||||||||||||||.|||||
Sbjct 223 GGCTGGGATCGGTATTTGACCAATCAAAAGAACTCCAATAGCAAAAACGACCGGAGGAACCGGAAGTTCAAGGA 296
Query 252 AGCTGAGCGGCTCTTCAGTAAATCCTCGGTTACCTCAGCAGCTGCAGTAAGTGCATTGGCAGGAGTTCAGGACC 325
.||.||.|||||||||||.||||||||.||.||.||.||.||||||||||||||.||||||||.||||||||||
Sbjct 297 GGCCGAACGGCTCTTCAGCAAATCCTCAGTCACGTCGGCTGCTGCAGTAAGTGCCTTGGCAGGGGTTCAGGACC 370
Query 326 AGCTCATTGAAAAGAGGGAGCCAGGAAGTGGGACGGAAAGTGACACTTCTCCAGACTTCCACAATCAGGAAAAT 399
|||||||.|||||||||||.||||||||||||||||||||.||.|||||||||||||||||||||||||||||.
Sbjct 371 AGCTCATCGAAAAGAGGGAACCAGGAAGTGGGACGGAAAGCGATACTTCTCCAGACTTCCACAATCAGGAAAAC 444
Query 400 GAGCCCAGC-CAGGAGGACCCTGAGGATCTGGATGGATCTGTGCAGGGAGTGAAACCTCAGAAGGCTGCTTCTT 472
||| ||.|| |||||||||||.|||||.||.||.||.||.||.||||||||||||||||||||.||.||.||||
Sbjct 445 GAG-CCTGCGCAGGAGGACCCCGAGGACCTAGACGGCTCCGTCCAGGGAGTGAAACCTCAGAAAGCCGCCTCTT 517
Query 473 CTACTTCCTCAGGGAGTCACCACAGCAGCCATAAAAAGCGAAAGAATAAAAACCGGCAC--------------- 531
|.||.||||||||.||.||||||||||||||.|||||.||.||||||||||||||||||
Sbjct 518 CCACCTCCTCAGGAAGCCACCACAGCAGCCACAAAAAACGGAAGAATAAAAACCGGCACAGGTATGTATATTAG 591
Query 532 -------------------------------------------AGGATTGATCTGAAGTTAAACAAAAAACCAC 562
||||||||||||||||||||||||||.||.|
Sbjct 592 GTTAGGCTGGGAAGTTTTTTTTAAAAACAGAAAAACGTGATGGAGGATTGATCTGAAGTTAAACAAAAAGCCCC 665
Query 563 GAGCTGACTAT--------------------------------------------------------------- 573
|||||||||||
Sbjct 666 GAGCTGACTATTAGAAGACTTGCTGGCAGAAGCTTCCAGGCTGTGAAGCTTCCCCTCTGACCTCACAGCCACAA 739
Query 574 -------------------------------------------------------------------------- 573
Sbjct 740 ATGTCCCTTGCCTGACTGTGGCCATCTGCCTCTGCCCCCCAGACCCAGTGCCTGTGACTGGCTAGTCTGACCTA 813
Query 574 -------------------------------------------------------------------------- 573
Sbjct 814 ACTGTAGTGACAAGTCCTCCCTATAAGACTTTTTGGGTCATTCGCTGCTGTCGTCATCATTAGTAGAACAGCGG 887
Query 574 -------------------------------------------------------------------------- 573
Sbjct 888 GAAGACCTGTCCTCCGTCCCAGTCCCTGCGGGTGGCTAACTGTGCATTTCTCCCTTCTTAGAATGAATGTCTCC 961
Query 574 -------------------------------------------------------------------------- 573
Sbjct 962 CCCCAAACTGGCTGGCACCAGCTCCATCTGTGACACCCCCGCCCCCATCGAGAAGTGCACACACCTCTGATTCT 1035
Query 574 -------------------------------------------------------------------------- 573
Sbjct 1036 GTGTTAAGCTGAAAGTAGAACCCAAGGTCCATTGCAGATGGAGGCTGTAAATATCTGCCATTCTCTTGTTTTGT 1109
Query 574 -------------------------------------------------------------------------- 573
Sbjct 1110 TTTGTGTTGTATTGTTTTTTTATTGTTGCTTTTACCATCTGATTTTCTTTTGGGACATTTTGTGATGCCTGTAC 1183
Query 574 -------------------------------------------------------------------------- 573
Sbjct 1184 CTTCCTGATGACACATCTGATCGTCTGTTTCATGTGGTGTCGATATTCATAACTGAAACTAAAGTGGCTTTTAG 1257
Query 574 -------------------------------------------------------------------------- 573
Sbjct 1258 AAGGAAATGGGCAGCTGCCTCTTTGGCTTCTTGATTTCTTCAGGGGGAAGGGAGAGAGTGTTTTCACGGTGGAT 1331
Query 574 -------------------------------------------------------------------------- 573
Sbjct 1332 GGCCTATCAGGAACAGTTTTATGTGGGAGGAACAAGAAGCTAAACAGCACACGTTGAAACCCTCCCATTGGAGT 1405
Query 574 ------------------------------------ 573
Sbjct 1406 AGACTCTTTGTAGGAATAAAATCTCCCTGGCTCGCC 1441