Construct: ORF ccsbBroadEn_12486

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF016797.1_s300c1, BRDN0000388806
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
MEAF6 (64769)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 64769 MEAF6 MYST/Esa1 associated factor 6 NM_001270875.2 100% 100%
2 human 64769 MEAF6 MYST/Esa1 associated factor 6 NM_001270876.2 95% 91.8% (many diffs)
3 human 64769 MEAF6 MYST/Esa1 associated factor 6 NM_022756.6 95% 94.5% 534_563del
4 human 64769 MEAF6 MYST/Esa1 associated factor 6 NR_073091.2 11.9% 1_20del;552_609del;652_4793del
5 human 64769 MEAF6 MYST/Esa1 associated factor 6 NR_073090.2 11.8% 1_20del;552_639del;682_4823del
6 human 64769 MEAF6 MYST/Esa1 associated factor 6 NR_073092.2 11.8% (many diffs)
7 mouse 70088 Meaf6 MYST/Esa1-associated factor 6 NM_001290701.1 90% 98.9% (many diffs)
8 mouse 70088 Meaf6 MYST/Esa1-associated factor 6 NM_027310.4 85.6% 90.8% (many diffs)
9 mouse 70088 Meaf6 MYST/Esa1-associated factor 6 XM_006503382.3 85.5% 93.5% (many diffs)
10 mouse 70088 Meaf6 MYST/Esa1-associated factor 6 XM_006503381.3 81% 85.1% (many diffs)
11 mouse 70088 Meaf6 MYST/Esa1-associated factor 6 XR_376354.3 35.8% (many diffs)
12 mouse 70088 Meaf6 MYST/Esa1-associated factor 6 XR_376353.3 35.1% (many diffs)
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
639
ORF length:
573
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGGC GATGCACAAC AAGGCGGCGC CGCCGCAGAT CCCGGACACC CGGCGGGAGC
121TGGCGGAGCT CGTGAAGCGG AAGCAGGAGC TGGCGGAAAC ATTGGCAAAT TTGGAGCGAC
181AGATCTATGC TTTTGAGGGA AGCTACCTGG AAGACACTCA GATGTATGGC AATATTATTC
241GTGGCTGGGA TCGGTATCTG ACCAACCAAA AAAACTCCAA TAGCAAAAAT GATCGAAGGA
301ACCGGAAGTT TAAGGAAGCT GAGCGGCTCT TCAGTAAATC CTCGGTTACC TCAGCAGCTG
361CAGTAAGTGC ATTGGCAGGA GTTCAGGACC AGCTCATTGA AAAGAGGGAG CCAGGAAGTG
421GGACGGAAAG TGACACTTCT CCAGACTTCC ACAATCAGGA AAATGAGCCC AGCCAGGAGG
481ACCCTGAGGA TCTGGATGGA TCTGTGCAGG GAGTGAAACC TCAGAAGGCT GCTTCTTCTA
541CTTCCTCAGG GAGTCACCAC AGCAGCCATA AAAAGCGAAA GAATAAAAAC CGGCACAGGA
601TTGATCTGAA GTTAAACAAA AAACCACGAG CTGACTATTA CCCAACTTTC TTGTACAAAG
661Ttggcattat aagaaagcat tgcttatcaa tttgttgcaa cgaac

Download FASTA (ORF) (Full)