Nucleotide Global Alignment

Description

• Query: ccsbBroadEn_12504
• Subject: NR_126051.2
• Aligned Length: 4465
• Identities: 2474
• Gaps: 1991

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  AGATTGGGGCCTGTGGAGGCCGCACTAGGATCGTAGAAGGAGTGGAGCCGTGCTCTCACCCTGTCTTAGAGGAC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  CCGGAAGCGCCAAGTGACTGAGGGCCGAAGACACTCACCTGTGGAGCCTGTGCACGTAGGTAGAGGCGGCGGCT  148

Query    1  ------------------------------------------ATGAACTACGTGGGGCAGCTGGCGGAGACGGT  32
                                                      ||||||||||||||||||||||||||||||||
Sbjct  149  CTGAGTCCAGGAGCTCCAGTGGGCAGCTCCCCAGCACCAGCCATGAACTACGTGGGGCAGCTGGCGGAGACGGT  222

Query   33  GTTTGGGACGGTGAAGGAGCTGTACCGGGGCCTGAACCCAGCCACACTGAGCGGCGGCATTGACGTGCTGGTGG  106
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  GTTTGGGACGGTGAAGGAGCTGTACCGGGGCCTGAACCCAGCCACACTGAGCGGCGGCATTGACGTGCTGGTGG  296

Query  107  TGAAGCAGGTGGACGGCTCGTTCCGGTGCTCACCCTTCCACGTGCGTTTTGGCAAGCTGGGCGTCCTGCGGTCG  180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  TGAAGCAGGTGGACGGCTCGTTCCGGTGCTCACCCTTCCACGTGCGTTTTGGCAAGCTGGGCGTCCTGCGGTCG  370

Query  181  CGGGAGAAGGTGGTAGACATTGAGCTCAATGGGGAGCCTGTGGACTTGCACATGAAGCTTGGGGACAGCGGGGA  254
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  CGGGAGAAGGTGGTAGACATTGAGCTCAATGGGGAGCCTGTGGACTTGCACATGAAGCTTGGGGACAGCGGGGA  444

Query  255  GGCCTTCTTTGTTCAGGAGCTGGAGAGCGATGATGAACATGTGCCTCCCGGCCTGTGCACCTCACCCATCCCTT  328
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  GGCCTTCTTTGTTCAGGAGCTGGAGAGCGATGATGAACATGTGCCTCCCGGCCTGTGCACCTCACCCATCCCTT  518

Query  329  GGGGGGGTCTGTCTGGCTTCCCCTCGGACTCCCAGCTGGGCACTGCCAGTGAGCCTGAGGGCCTCGTCATGGCA  402
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  GGGGGGGTCTGTCTGGCTTCCCCTCGGACTCCCAGCTGGGCACTGCCAGTGAGCCTGAGGGCCTCGTCATGGCA  592

Query  403  GGCACGGCCTCCACTGGGCGGAGGAAGAGGCGTCGCAGGAGGAAACCCAAGCAGAAAGAGGATGCAGTGGCAAC  476
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  GGCACGGCCTCCACTGGGCGGAGGAAGAGGCGTCGCAGGAGGAAACCCAAGCAGAAAGAGGATGCAGTGGCAAC  666

Query  477  TGATTCTAGTCCAGAGGAACTGGAGGCAGGCGCTGAGAGTGAGCTATCCCTGCCGGAAAAGCTGAGGCCAGAGC  550
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  TGATTCTAGTCCAGAGGAACTGGAGGCAGGCGCTGAGAGTGAGCTATCCCTGCCGGAAAAGCTGAGGCCAGAGC  740

Query  551  CCCCAGGCAGTGTCCAGTTGGAAGAGAAGTCTTCACTGCAGCCCAAAGACATCTACCCCTACTCGGATGGCGAG  624
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  CCCCAGGCAGTGTCCAGTTGGAAGAGAAGTCTTCACTGCAGCCCAAAGACATCTACCCCTACTCGGATGGCGAG  814

Query  625  TGGCCCCCCCAGGCCAGCCTCTCAGCAGGTGAGCTAACATCCCCTAAGAGCGACTCGGAGCTGGAGGTGCGGAC  698
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  TGGCCCCCCCAGGCCAGCCTCTCAGCAGGTGAGCTAACATCCCCTAAGAGCGACTCGGAGCTGGAGGTGCGGAC  888

Query  699  CCCGGAGCCCAGTCCCCTAAGAGCCGAGTCCCACATGCAGTGGGCCTGGGGGAGGCTGCCTAAGGTGGCCAGAG  772
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  CCCGGAGCCCAGTCCCCTAAGAGCCGAGTCCCACATGCAGTGGGCCTGGGGGAGGCTGCCTAAGGTGGCCAGAG  962

Query  773  CTGAGCGGCCCGAGTCCTCAGTGGTCCTTGAAGGCAGAGCTGGGGCAACCTCTCCTCCTCGGGGAGGACCCAGC  846
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  CTGAGCGGCCCGAGTCCTCAGTGGTCCTTGAAGGCAGAGCTGGGGCAACCTCTCCTCCTCGGGGAGGACCCAGC  1036

Query  847  ACTCCCTCTACCTCTGTGGCTGGCGGCGTGGACCCTTTGGGACTCCCAATCCAGCAAACAGAGGCTGGTGCCGA  920
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  ACTCCCTCTACCTCTGTGGCTGGCGGCGTGGACCCTTTGGGACTCCCAATCCAGCAAACAGAGGCTGGTGCCGA  1110

Query  921  CCTTCAGCCTGACACAGAGGATCCCACTCTAGTGGGTCCCCCTCTCCACACCCCAGAGACAGAGGAAAGCAAGA  994
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111  CCTTCAGCCTGACACAGAGGATCCCACTCTAGTGGGTCCCCCTCTCCACACCCCAGAGACAGAGGAAAGCAAGA  1184

Query  995  CTCAGAGCTCTGGGGACATGGGCCTCCCTCCTGCCTCCAAGTCATGGAGCTGGGCCACTCTGGAGGTTCCAGTT  1068
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185  CTCAGAGCTCTGGGGACATGGGCCTCCCTCCTGCCTCCAAGTCATGGAGCTGGGCCACTCTGGAGGTTCCAGTT  1258

Query 1069  CCCACCGGGCAGCCAGAGAGGGTCTCCAGGGGGAAAGGCTCCCCAAAGAGAAGCCAGCACCTGGGCCCCAGTGA  1142
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259  CCCACCGGGCAGCCAGAGAGGGTCTCCAGGGGGAAAGGCTCCCCAAAGAGAAGCCAGCACCTGGGCCCCAGTGA  1332

Query 1143  CATCTACCTGGATGACTTGCCCTCCCTGGACTCTGAGAATGCAGCGCTTTACTTCCCCCAAAGTGACTCTGGGC  1216
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333  CATCTACCTGGATGACTTGCCCTCCCTGGACTCTGAGAATGCAGCGCTTTACTTCCCCCAAAGTGACTCTGGGC  1406

Query 1217  TGGGGGCCAGAAGATGGAGTGAACCCAGCAGTCAGAAGTCCCTGAGGGACCCCAACCCTGAACATGAACCTGAA  1290
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407  TGGGGGCCAGAAGATGGAGTGAACCCAGCAGTCAGAAGTCCCTGAGGGACCCCAACCCTGAACATGAACCTGAA  1480

Query 1291  CCCACTCTGGACACAGTGGATACAATAGCACTGTCCCTCTGTGGTGGACTGGCTGACAGCCGGGACATCTCCCT  1364
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481  CCCACTCTGGACACAGTGGATACAATAGCACTGTCCCTCTGTGGTGGACTGGCTGACAGCCGGGACATCTCCCT  1554

Query 1365  AGAGAAATTCAACCAGCACAGCGTCTCTTACCAGGACCTCACCAAAAACCCCGGACTTTTGGATGACCCAAACC  1438
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555  AGAGAAATTCAACCAGCACAGCGTCTCTTACCAGGACCTCACCAAAAACCCCGGACTTTTGGATGACCCAAACC  1628

Query 1439  TAGTGGTGAAAATCAATGGAAAGCATTATAACTGGGCTGTGGCTGCCCCCATGATCCTCTCCCTGCAAGCCTTC  1512
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629  TAGTGGTGAAAATCAATGGAAAGCATTATAACTGGGCTGTGGCTGCCCCCATGATCCTCTCCCTGCAAGCCTTC  1702

Query 1513  CAGAAAAACTTGCCCAAGAGCACCATGGACAAGCTGGAGAGGGAGAAGATGCCCCGGAAGGGTGGGCGATGGTG  1586
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703  CAGAAAAACTTGCCCAAGAGCACCATGGACAAGCTGGAGAGGGAGAAGATGCCCCGGAAGGGTGGGCGATGGTG  1776

Query 1587  GTTTTCCTGGCGACGCAGGGACTTCCTGGCCGAGGAGCGCAGTGCCCAGAAGGAGAAGACTGCAGCCAAGGAGC  1660
            |||||||||||||||||||||||||||||||||||     ||||||||||||||||||||||||||||||||||
Sbjct 1777  GTTTTCCTGGCGACGCAGGGACTTCCTGGCCGAGG-----AGTGCCCAGAAGGAGAAGACTGCAGCCAAGGAGC  1845

Query 1661  AGCAGGGGGAGAAGACAGAAGTCCTGAGCAGTGATGACGATGCCCCAGACAGCCCTGTGATCCTGGAGATCCCC  1734
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1846  AGCAGGGGGAGAAGACAGAAGTCCTGAGCAGTGATGACGATGCCCCAGACAGCCCTGTGATCCTGGAGATCCCC  1919

Query 1735  TCCTTGCCACCCTCCACTCCACCCTCCACTCCTACCTACAAGAAGTCCCTCCGCCTCTCCTCCGATCAGATCCG  1808
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1920  TCCTTGCCACCCTCCACTCCACCCTCCACTCCTACCTACAAGAAGTCCCTCCGCCTCTCCTCCGATCAGATCCG  1993

Query 1809  GCGCCTGAACCTGCAAGAAGGTGCCAATGATGTGGTCTTCAGCGTGACCACTCAGTACCAGGGCACCTGCCGCT  1882
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1994  GCGCCTGAACCTGCAAGAAGGTGCCAATGATGTGGTCTTCAGCGTGACCACTCAGTACCAGGGCACCTGCCGCT  2067

Query 1883  GCAAGGCCACCATCTACCTGTGGAAATGGGACGACAAGGTGGTCATCTCTGACATCGACGGCACCATCACCAAG  1956
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2068  GCAAGGCCACCATCTACCTGTGGAAATGGGACGACAAGGTGGTCATCTCTGACATCGACGGCACCATCACCAAG  2141

Query 1957  TCAGATGCTCTGGGCCATATCCTGCCCCAGCTGGGGAAAGACTGGACACACCAGGGCATCACCAGTCTCTATCA  2030
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2142  TCAGATGCTCTGGGCCATATCCTGCCCCAGCTGGGGAAAGACTGGACACACCAGGGCATCACCAGTCTCTATCA  2215

Query 2031  CAAAATCCAACTAAATGGGTACAAGTTCCTGTACTGCTCGGCGCGGGCCATTGGCATGGCGGACCTCACCAAGG  2104
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2216  CAAAATCCAACTAAATGGGTACAAGTTCCTGTACTGCTCGGCGCGGGCCATTGGCATGGCGGACCTCACCAAGG  2289

Query 2105  GGTACCTGCAGTGGGTGAGCGAGGGGGGCTGTAGCCTCCCCAAGGGCCCCATCCTTCTGTCTCCCAGCAGCCTC  2178
            |||||||||||||                                                             
Sbjct 2290  GGTACCTGCAGTG-------------------------------------------------------------  2302

Query 2179  TTCTCTGCCCTCCACAGAGAGGTGATCGAGAAGAAACCAGAGGTGTTCAAGGTCGCCTGCCTGAGTGACATCCA  2252
                            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2303  ----------------GAGAGGTGATCGAGAAGAAACCAGAGGTGTTCAAGGTCGCCTGCCTGAGTGACATCCA  2360

Query 2253  GCAGCTGTTTCTGCCCCACGGACAGCCCTTCTATGCTGCCTTTGGGAATAGGCCCAATGATGTCTTTGCCTACC  2326
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2361  GCAGCTGTTTCTGCCCCACGGACAGCCCTTCTATGCTGCCTTTGGGAATAGGCCCAATGATGTCTTTGCCTACC  2434

Query 2327  GGCAGGTGGGCCTGCCTGAGTCACGCATCTTCACAGTCAACCCCCGGGGAGAGCTCATCCAGGAGCTCATAAAG  2400
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2435  GGCAGGTGGGCCTGCCTGAGTCACGCATCTTCACAGTCAACCCCCGGGGAGAGCTCATCCAGGAGCTCATAAAG  2508

Query 2401  AACCACAAATCCACGTATGAGCGGCTTGGTGAAGTGGTCGAGCTCCTCTTCCCACCTGTGGCCCGTGGCCCCAG  2474
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2509  AACCACAAATCCACGTATGAGCGGCTTGGTGAAGTGGTCGAGCTCCTCTTCCCACCTGTGGCCCGTGGCCCCAG  2582

Query 2475  CACAGACCTGGCCAACCCTGAATACAGTAACTTCTGCTACTGGCGGGAGCCACTGCCTGCTGTGGACCTTGATA  2548
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2583  CACAGACCTGGCCAACCCTGAATACAGTAACTTCTGCTACTGGCGGGAGCCACTGCCTGCTGTGGACCTTGATA  2656

Query 2549  CCCTGGAC------------------------------------------------------------------  2556
            ||||||||                                                                  
Sbjct 2657  CCCTGGACTGAACCTGCCCTGGCTGGCTCCTCCTCCCTGGCCCGGCCCAGGACTGGCTAGGTGTCCTGGGGTAT  2730

Query 2557  --------------------------------------------------------------------------  2556
                                                                                      
Sbjct 2731  AGGAGGGTGGGAATTGGAGTGTCATGGGGCAAACCCACTGAAGGGGAAGGAGGAGGCTGCAGGTTGGTTGGCAG  2804

Query 2557  --------------------------------------------------------------------------  2556
                                                                                      
Sbjct 2805  CTAGAGAGACTCCCCCATCTTCCCCGTCATATTTTTGCCAGCTAAGCTGCAGCTGCTCCAGGCGTCAGTGTGGC  2878

Query 2557  --------------------------------------------------------------------------  2556
                                                                                      
Sbjct 2879  ACTGTCCTGGGGCAATTAGCTTGTCATCTGGGCCCTTGCAGGGTTCTTTTTTTTTTTTTTTTTTTTTTTTTCCT  2952

Query 2557  --------------------------------------------------------------------------  2556
                                                                                      
Sbjct 2953  GAGACAGGGTCTTGTTCTGTTGCCCAGGCTGGAGTGCAGTGGCATGATCTCTCGGCTCACTGCAACCTCCGCCT  3026

Query 2557  --------------------------------------------------------------------------  2556
                                                                                      
Sbjct 3027  CCCGGGTTCAAGCGATTCACCTGCCTCAGCCTCCCAAGTAGCTGGGATTACAGGCGTGTACCACCACGCCTGGC  3100

Query 2557  --------------------------------------------------------------------------  2556
                                                                                      
Sbjct 3101  TAATTTTCGTGTTTTTAGTAGAGATGGGTTTTCACCACATTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAGT  3174

Query 2557  --------------------------------------------------------------------------  2556
                                                                                      
Sbjct 3175  GATTTGCCCACCTCGGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCTACCATGCCAGGCCTCCTTGCAGGGT  3248

Query 2557  --------------------------------------------------------------------------  2556
                                                                                      
Sbjct 3249  TTTCTATGCCCTTGATATCTGTCTCCCTGTCAACCTGGGACCTTGCTGTAAGTCTTGATAGGACAGGGAGAAGA  3322

Query 2557  --------------------------------------------------------------------------  2556
                                                                                      
Sbjct 3323  GGGAGGCCCTACCGAGGCTCGAGGCTTCAGTGAAGGGTGACAGCAGTGGGAGTGTGGTACAGCCTCTGGAAGGA  3396

Query 2557  --------------------------------------------------------------------------  2556
                                                                                      
Sbjct 3397  CACAGTGTTCTCCCCGCCCCTTGTCTGGGAGCCAGGACTGTACCCTCCGAAGCCAGACATCACTGCCAACATAT  3470

Query 2557  --------------------------------------------------------------------------  2556
                                                                                      
Sbjct 3471  CCCCCTTGCTGGTGCCCTGGCATCTCAGCACATGACACACACCCACACCTGCAGGCTGTGGTTCCGGCTTGGCC  3544

Query 2557  --------------------------------------------------------------------------  2556
                                                                                      
Sbjct 3545  TGCTCCCCGTCCGGCTGCTGCCGCTGCCTCTCTCCAGACCTCGCTTAAGGACAGTCCCAAACTCAGCTGGGGCA  3618

Query 2557  --------------------------------------------------------------------------  2556
                                                                                      
Sbjct 3619  GGTGTTGGCCTGAAAGTCCTCCCCCAGCCTCTGCTGGCCAGCTTGGTGCTCACAGCTGCTGGGTAAGCTCTTGC  3692

Query 2557  --------------------------------------------------------------------------  2556
                                                                                      
Sbjct 3693  CTAAGGAGCTGTGGGAAGCAGGGCTGATGCCCCAGCAACCTCTCCTCCCACTGTCTTTGAAGAAAGTAGCTTTA  3766

Query 2557  --------------------------------------------------------------------------  2556
                                                                                      
Sbjct 3767  GACCGGCTAAAAGCTTTAATCCAGAGCCTGCCCTACTCTGATAGTACCAGAGTGGAGGGCAGAATACCAAATGT  3840

Query 2557  --------------------------------------------------------------------------  2556
                                                                                      
Sbjct 3841  CCAGGAACCAAAGGCAGGGCTGTGGGGACCTGAAGAGCAGCACAGTGGGGCCCGTGCTGCTGTGGGGGAAACTG  3914

Query 2557  --------------------------------------------------------------------------  2556
                                                                                      
Sbjct 3915  AGGCTGGGAGCCTCAGCAGAGACCGGTGTCAAGAGTCTCTGGGAACTGCATAGGCCTGAGGAACATGCATTTTC  3988

Query 2557  --------------------------------------------------------------------------  2556
                                                                                      
Sbjct 3989  AAGTTGTCCATTGATGGTTTCGTACCTGAATTTCTCACCTTTTGTGAACATCTTGGGAGGGTGGGGGTTTTGCA  4062

Query 2557  --------------------------------------------------------------------------  2556
                                                                                      
Sbjct 4063  GGGGTGTTAAAAGCAAGGCTTGGAGCCCCTTTCCTCCAGCTGGTGGCTCCTTCTCAGGGCCTGGCCTCATTCAG  4136

Query 2557  --------------------------------------------------------------------------  2556
                                                                                      
Sbjct 4137  GCCACTTTGTAGAGAAATGCCCTGACCTCGCAGGAAGGATTTCCCCACCCCCAAGTGGAAGGAAGAGGACAGTG  4210

Query 2557  --------------------------------------------------------------------------  2556
                                                                                      
Sbjct 4211  TGGGCACCAGAGGGCCCTGGAAACATCTTAGGGGAAGGAAAGGAAAAGGATAAATTTGGAGTGGGGGGTCTCTA  4284

Query 2557  --------------------------------------------------------------------------  2556
                                                                                      
Sbjct 4285  AACAGATTGCCTGGATTCCGTTCTTTCCTGGGGTTCTACAGCTGCCTAAGCCCTCACCTTGGGGGAGGATCAAA  4358

Query 2557  -------------------------  2556
                                     
Sbjct 4359  GGGAATAAAGAGAACTCTTGGCTGA  4383