Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_12528
- Subject:
- XM_017318142.1
- Aligned Length:
- 1908
- Identities:
- 859
- Gaps:
- 936
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGCCCCGCCGCTCCTATTGCTGCTGCTGGCCAGTGGAGCCGCTGCTTGCCCGCTACCCTGTGTGTGCCAGAA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CCTGTCGGAGTCACTCAGCACCCTTTGTGCCCACCGAGGCCTGCTGTTTGTGCCACCCAACGTGGACAGGCGCA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CAGTTGAACTGCGCCTGGCCGACAACTTCATCCAGGCCCTGGGACCACCTGACTTCCGCAACATGACAGGGCTG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GTGGACCTAACATTGTCTCGAAATGCCATCACCCGCATTGGGGCTCGCTCCTTTGGGGACCTGGAGAGCCTGCG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CTCCTTGCACCTGGATGGCAACAGGCTGGTGGAGCTGGGCAGCAGCAGCCTACGGGGGCCTGTCAACCTCCAGC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 ATCTCATTCTCAGTGGCAATCAACTGGGCCGCATCGCCCCCGGGGCCTTCGACGACTTCCTTGACAGTCTCGAG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GACCTGGATGTGTCCTATAACAACCTCCGGCAGGTTCCCTGGGCTGGCATAGGCTCCATGCCTGCCCTGCATAC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CCTGAACCTGGACCATAACCTCATCGATGCACTACCCCCAGGTGTCTTTGCTCAGCTCAGCCAGCTCTCCCGCC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TTGACCTCACCTCCAACCGCCTGGCCACCCTGGCACCTGATCCACTCTTCTCCCGAGGCCGGGATGCTGAGGCC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TCACCTTCTCCCCTGGTGCTGAGTTTCAGCGGGAACCCACTGCACTGCAACTGTGAGCTGCTGTGGCTGCGGCG 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GCTGGCCCGGCCCGATGACCTGGAAACCTGCGCTTCTCCACCAACCCTGGCAGGCCGCTACTTCTGGGCAGTGC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CTGAGGGAGAGTTCTCCTGTGAGCCTCCGCTGATTGCCCGGCACACACAGCGCCTGTGGGTGCTAGAGGGCCAG 888
Query 1 ---------------------------------------------ATGCACTGGGTCGGTCCTGACGACCGGTT 29
|||||||||||.||.|||||.|||.||.|
Sbjct 889 CGGGCCACCCTACGGTGCAGGGCCCTTGGTGACCCTGTACCTACCATGCACTGGGTTGGCCCTGATGACAGGCT 962
Query 30 GGTTGGCAACTCCTCCCGAGCCCGGGCTTTCCCCAACGGGACCTTAGAGATTGGGGTGACCGGCGCTGGGGACG 103
||||||||||||.||.||||||.|||||||||||||.||||||.||||||||||||||||.||||||||.||.|
Sbjct 963 GGTTGGCAACTCTTCTCGAGCCTGGGCTTTCCCCAATGGGACCCTAGAGATTGGGGTGACGGGCGCTGGAGATG 1036
Query 104 CTGGGGGCTACACCTGCATCGCCACCAACCCTGCTGGTGAGGCCACAGCCCGAGTAGAACTGCGGGTGCTGGCC 177
|.||.|.|||.||||||||.|||||||||||||||||||||||||||||||||||.||.||.|||||.||||||
Sbjct 1037 CAGGAGCCTATACCTGCATTGCCACCAACCCTGCTGGTGAGGCCACAGCCCGAGTGGAGCTCCGGGTACTGGCC 1110
Query 178 TTGCCCCATGGTGGGAACAGCAGTGCCGAGGGGGGCCGCCCCGGGCCCTCGGACATCGCCGCCTCCGCTCGCAC 251
|||||||||||||||||||.||||||.|||||||||||.||.|||||.||||||||.||.||.||.|||.|.||
Sbjct 1111 TTGCCCCATGGTGGGAACACCAGTGCTGAGGGGGGCCGTCCTGGGCCTTCGGACATTGCTGCTTCTGCTAGAAC 1184
Query 252 TGCTGCCGAGGGTGAGGGGACGCTGGAGTCTGAGCCAGCCGTGCAGGTGACGGAGGTGACCGCCACCTCAGGGC 325
|||||||||.||.|||||.||..|.||.|||||.|||||.|||||.||||||||||||||.||||||||.||.|
Sbjct 1185 TGCTGCCGAAGGCGAGGGAACTTTAGAATCTGAACCAGCAGTGCAAGTGACGGAGGTGACTGCCACCTCTGGCC 1258
Query 326 TGGTGAGCTGGGGTCCCGGGCGGCCAGCCGACCCAGTGTGGATGTTCCAAATCCAGTACAACAGCAGCGAAGAT 399
|||||||||||||.|..|||||||||||.|||||||||||||||||||||||||||||||||||||||||.|||
Sbjct 1259 TGGTGAGCTGGGGCCTGGGGCGGCCAGCTGACCCAGTGTGGATGTTCCAAATCCAGTACAACAGCAGCGAGGAT 1332
Query 400 GAGACCCTCATCTACCGGATTGTCCCAGCCTCCAGCCACCACTTCCTGCTGAAGCACCTCGTCCCCGGCGCTGA 473
|||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||.||.|||||.|||||
Sbjct 1333 GAGACCCTCATCTACCGGATTGTACCAGCCTCCAGCCACCACTTCCTGCTGAAGCACCTGGTTCCCGGTGCTGA 1406
Query 474 CTATGACCTCTGCCTGCTGGCCTTGTCACCGGCCGCTGGGCCCTCTGACCTCACGGCCACCAGGCTGCTGGGCT 547
|||.||||||||||||||||||.|||||||.||.|||||||||||.||||||||||||||.||.||||||||||
Sbjct 1407 CTACGACCTCTGCCTGCTGGCCCTGTCACCTGCTGCTGGGCCCTCCGACCTCACGGCCACTAGACTGCTGGGCT 1480
Query 548 GTGCCCATTTCTCCACGCTGCCGGCCTCGCCCCTGTGCCACGCCCTGCAGGCCCACGTGCTGGGCGGGACCCTG 621
|||||||.|||||.|||||.||.|||.|.|||||||||||.|||||.||||||||.||||||||||||||||||
Sbjct 1481 GTGCCCACTTCTCTACGCTACCAGCCACCCCCCTGTGCCATGCCCTACAGGCCCATGTGCTGGGCGGGACCCTG 1554
Query 622 ACCGTGGCCGTGGGGGGTGTGCTGGTGGCTGCCTTACTGGTCTTCACTGTGGCCTTGCTGGTTCGGGGCCGGGG 695
||.|||||.||||||||.||.||.||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555 ACTGTGGCAGTGGGGGGCGTCCTAGTGGCTGCCTTACTGGTCTTCACTGTGGCCTTGCTGGTTCGGGGCCGGGG 1628
Query 696 GGCCGGAAATGGCCGCCTCCCCCTCAAGCTCAGCCACGTCCAGTCCCAGACCAATGGAGGCCCCAGCCCCACAC 769
.||.||.||||||||||||||.|||||.||||||||.|||||.||||||||||||||.|||.|||||||||..|
Sbjct 1629 AGCTGGGAATGGCCGCCTCCCACTCAAACTCAGCCATGTCCAATCCCAGACCAATGGTGGCACCAGCCCCATGC 1702
Query 770 CCAAGGCCCACCCGCCGCGGAGCCCCCCGCCCCGGCCGCAGCGCAGCTGCTCTCTGGACCTGGGAGATGCC--- 840
|||||..||||||.||.||||||||.||.|||||.||.||||||||||||||.||||||||.|||||..||
Sbjct 1703 CCAAGAGCCACCCACCACGGAGCCCTCCACCCCGTCCTCAGCGCAGCTGCTCCCTGGACCTAGGAGACACCGGA 1776
Query 841 GGGTGCTACGGTTATGCCAGGCGCCTGGGAGGAGCTTGGGCCCGACGGAGCCACTCTGTGCATGGGGGGCTGCT 914
||.||||||||.|||||||||||||||||||||||.||||||||.||||||||||||||.||||||||||||||
Sbjct 1777 GGATGCTACGGGTATGCCAGGCGCCTGGGAGGAGCCTGGGCCCGGCGGAGCCACTCTGTACATGGGGGGCTGCT 1850
Query 915 CGGGGCAGGGTGCCGGGGGGTAGGAGGCAGCGCCGAGCGGCTGGAAGAGAGTGTGGTG 972
.||.||.|||||.||||||||.||.|||||.||.|||||||||||.||||||||||||
Sbjct 1851 GGGAGCTGGGTGTCGGGGGGTGGGGGGCAGTGCGGAGCGGCTGGAGGAGAGTGTGGTG 1908
