Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_12573
- Subject:
- XR_427810.4
- Aligned Length:
- 3619
- Identities:
- 363
- Gaps:
- 3256
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AGCCAGAGCTGGCAAAGAAAGGCTCCAATTCCCAGCCCCCCGCCCCGCGGGGCGCGGGGGCGCCGGCAGCGCAT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GCGCGAGGCCCGGCCCCCAATTCCCCCAGCGAGGGAGGGAGGCCCCCGGCGGCCGGGAGCCTGCGAGCCGCGGC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GGGACCCGAGCGCACGCAGGGGCGCGGCGACGGCGGGGGCTAGTCGGGCTGCGGAGGCGGCCGTCGGGAGTGCG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GAGCGCCTCGGACGAGGGTCCAACCGCCGGCAGGCACCAGAGGGCACGGCTGGCTCGGCACTGGGAGGGGCCCG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GCGCTCGCAGCCCCCCACGCCCAGAGAGGATGCGGTGCGCCCTGAGAGCCGGGTAGCCTCGGATAGCGGCGCTG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CGTACGCGATGATGGATGAGCCGTGGTGGGAAGGGCGCGTCGCCTCGGACGTCCACTGCACCCTGCGCGAGAAG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GAACTGAAGCTGCCCACCTTCCGAGCCCACTCCCCACTCCTGAAGAGCCGCCGGTTCTTCGTGGACATCCTGAC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CCTGCTGAGCAGCCACTGCCAGCTCTGCCCTGCAGCCCGGCACCTGGCCGTCTACCTGCTGGACCACTTCATGG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 ATCGCTACAACGTCACCACCTCCAAGCAGCTCTACACCGTGGCCGTCTCCTGCCTCCTGCTTGCAAACGGAGTT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TCGCTCTTATCGCCCAGGCTGAAGTGCAGTGGCATGATCTCAGCTCATTGCAACCTCCACCTCCCAGGTTCAAG 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CAATTCTCCTGCTTCAGCGCCCCACCCCCCACCCACACCGCCCCAAGTAGCTGAGACTACAGGTAAGTTCGAGG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 ATCGGGAAGACCACGTCCCCAAGTTGGAGCAAATAAACAGCACGAGGATCCTGAGCAGCCAGAACTTCACCCTC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 ACCAAGAAGGAGCTGCTGAGCACAGAGCTGCTGCTCCTGGAGGCCTTCAGCTGGAACCTCTGCCTGCCCACGCC 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TGCCCACTTCCTGGACTACTACCTCTTGGCCTCCGTCAGCCAGAAGGACCACCACTGCCACACCTGGCCCACCA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CCTGCCCCCGCAAGACCAAAGAGTGCCTCAAGGAGTATGCCCATTACTTCCTAGAGGTCACCCTGCAAGATCAC 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 ATATTCTACAAATTCCAGCCTTCTGTGGTCGCTGCGGCCTGTGTTGGGGCCTCCAGGATTTGCCTGCAGCTTTC 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 TCCCTACTGGACCAGAGACCTGCAGAGGATCTCAAGCTATTCCCTGGAGCACCTCAGCACGTGTATTGAAATCC 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TGCTGGTCCCCCTTTTCAGATGAAAAATCCTAGGCCCCAGCGGTCAATTTGGTTGATATCAGCTAGCTAAGGAG 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 TGACCCCGCTGGGGATGGAGCTGGCCCAGAATTGCCTGGAAAGCAGAGATTGGGCTCATTCAGGCCCCAGGAAC 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 ACTCCAGTGCCAGGGGATGGGAAGGCATTGGTGAGCACAAGCAGGCGCCATCCTCCTGGAAGCCAGAGTGTATG 1480
Query 1 -----------------------------------------------ATGGTGCCCGGCACACCCCCCACCCCC 27
|||||||||||||||||||||||||||
Sbjct 1481 ACAACGTCCTCAAGGATGCCGTAGCCGTCAAGAGCCAGGCCTTGGCAATGGTGCCCGGCACACCCCCCACCCCC 1554
Query 28 ACTCAAGTGCTGTTCCAGCCACCAGCCTACCCGGCCCTCGGCCAGCCAGCGACCACCCTGGCACAGTTCCAGAC 101
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555 ACTCAAGTGCTGTTCCAGCCACCAGCCTACCCGGCCCTCGGCCAGCCAGCGACCACCCTGGCACAGTTCCAGAC 1628
Query 102 CCCCGTGCAGGACCTATGCTTGGCCTATCGGGACTCCTTGCAGGCCCACCGTTCAGGGAGCCTGCTCTCGGGGA 175
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629 CCCCGTGCAGGACCTATGCTTGGCCTATCGGGACTCCTTGCAGGCCCACCGTTCAGGGAGCCTGCTCTCGGGGA 1702
Query 176 GTACAGGCTCATCCCTCCACACCCCGTACCAACCGCTGCAGCCCTTGGATATGTGTCCCGTGCCCGTCCCTGCA 249
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703 GTACAGGCTCATCCCTCCACACCCCGTACCAACCGCTGCAGCCCTTGGATATGTGTCCCGTGCCCGTCCCTGCA 1776
Query 250 TCCCTTAGCATGCATATGGCCATTGCAGCTGAGCCCAGGCACTGCCTCGCCACCACCTATGGAAGCAGCTACTT 323
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777 TCCCTTAGCATGCATATGGCCATTGCAGCTGAGCCCAGGCACTGCCTCGCCACCACCTATGGAAGCAGCTACTT 1850
Query 324 CAGTGGGAGCCACATGTTCCCCACCGGCTGCTTTGACAGA---------------------------------- 363
||||||||||||||||||||||||||||||||||||||||
Sbjct 1851 CAGTGGGAGCCACATGTTCCCCACCGGCTGCTTTGACAGATAGGCCACCTCCAGACCTCACGAGGAAGCCTTGG 1924
Query 364 -------------------------------------------------------------------------- 363
Sbjct 1925 AGATGTGGGCAGAGGAAGAGGACACTGAAGAGGAGAGCTCAGCCAAGTGAGGCAGCAGGAGGCCATCCCTGAAG 1998
Query 364 -------------------------------------------------------------------------- 363
Sbjct 1999 AGCCTTGGAACGTGGAGGGTCTGTGCTCCTTTTAAATAAAACTGACCCAGAGCAAAACATTCAATAACATACCT 2072
Query 364 -------------------------------------------------------------------------- 363
Sbjct 2073 CACCCGAGAGCATTCCTCTGAGAAACGTCTGCCACGTGTGGCTAGGGTACAAAAGGATGGCTTGGTGGCCGTCC 2146
Query 364 -------------------------------------------------------------------------- 363
Sbjct 2147 CCCCACACAGGGGCCCAGTGAATCGAGAAAGACTTGATAAGAGGCCAGGAGAGTGGGAACTGGACACAGACCAC 2220
Query 364 -------------------------------------------------------------------------- 363
Sbjct 2221 TGATCTCAAGCATGTCCAGTTTTTAGCATTAAAGACTTTTCTATTCTTTGCTGATGGCAGCTACACCGCTGAAA 2294
Query 364 -------------------------------------------------------------------------- 363
Sbjct 2295 AAGGAGGGGCAGCCTGGCGTGTTCTCAGGACCCCCGGAGGATCCCATATTGGGTGCTTTTCTTTCCCTGGCTCT 2368
Query 364 -------------------------------------------------------------------------- 363
Sbjct 2369 ATGCAGAGGGGCCTGAGTTGGTGTGTATGCCTGAGTGTTTGCCTTGCGAGGCACAGTGGGTGGCTGTCTTGCCT 2442
Query 364 -------------------------------------------------------------------------- 363
Sbjct 2443 TTGTTTTCGAACCTAAAACCATTTTCAGCCTTTTAGATATGTCATGTGCTGCTGCTTCCCGAAGTGGTCTTGCT 2516
Query 364 -------------------------------------------------------------------------- 363
Sbjct 2517 TTCTGTTTCGTAAGATGTCTTGTTTACACACTGTATCAGGGATTTGGTGATACTTGAAAATTCCTTTGGAGAAA 2590
Query 364 -------------------------------------------------------------------------- 363
Sbjct 2591 AAAACAAATTTAATTGCCACACTGCCTGTCCCACATGAGGGCTGTTAATTTGGAACCCAAGTTTGAACCCAACT 2664
Query 364 -------------------------------------------------------------------------- 363
Sbjct 2665 TGTGATGGACCCGCAGGTAACCACAGAGCTTCCTTTTTGAAGGCATATGGTTGGAGAGAACCATTTTCCCAGCT 2738
Query 364 -------------------------------------------------------------------------- 363
Sbjct 2739 CTCGGTTCCGGAAGATTCCACGTCTTGGAGGCTGTGTTCACCACTAGAACTTTAATAACTACCCAGGGAGGGAG 2812
Query 364 -------------------------------------------------------------------------- 363
Sbjct 2813 AAGCTCGTTGAAAGGAAGACAAAGATTTAAACAGTTCCCACCTCTCTCCACCACATACTTACAGGGCATGAGTT 2886
Query 364 -------------------------------------------------------------------------- 363
Sbjct 2887 TAACCCAGTCTAGGCTTTGAGTGTGGCTGATAGCGAAGGATAGCAATGTGGAAAATTTGCTTAGTCCCACCTGT 2960
Query 364 -------------------------------------------------------------------------- 363
Sbjct 2961 ATTTGGGGAGTGGGATGTACATGGGCGTTTGATACCACCATTGATAGGCAAGCGACTGGTTGGATCAAAAGCCA 3034
Query 364 -------------------------------------------------------------------------- 363
Sbjct 3035 GTATTTAGGGATCTGCAGCGAGAGGGCCCTCAGGAAGACTCTTGTAACCATGTGCAATATGTTTTTATTCTGAC 3108
Query 364 -------------------------------------------------------------------------- 363
Sbjct 3109 TCGCAGCTTGTGCTCAGCATGTTCTTTGGTTTAGTTTGGGGTTGGGGGACACATTGTTCACCCAGCAGAACTGG 3182
Query 364 -------------------------------------------------------------------------- 363
Sbjct 3183 GAGGTGCAAAGGACCGTGGAAGCAATTTTTGTTTTGTTTGAGGAATACCTGTCTTGGATTCCTTAGCCCCTTGC 3256
Query 364 -------------------------------------------------------------------------- 363
Sbjct 3257 CAGTCCTGGAGACTGTGGCAGGGGCCGCCAGGAAGGCAGCTGTCTGCTGCTGAGTCAGATCGGAAGGTGGTGAA 3330
Query 364 -------------------------------------------------------------------------- 363
Sbjct 3331 TCTTTCCAGAGCAGCTGAAAATCTCAGCATGGAGACAGTAAGAAAAGAGACGGGGTGTGGATAAGACTCTGCCA 3404
Query 364 -------------------------------------------------------------------------- 363
Sbjct 3405 CCGTGTCACACTAGCATAGGAGGCTGCACGTTCATTTGTTGTTGTTTTTTTTTCCTTTGCCAACCTCCGTTCTA 3478
Query 364 -------------------------------------------------------------------------- 363
Sbjct 3479 TTTATGTGCAAGCAGTTTGGATTCAAGTTCTTGTATCTGTCTGTTCTGGGACCTGGGGATTGTGAGGGTTCCCT 3552
Query 364 ------------------------------------------------------------------- 363
Sbjct 3553 CACAGCCAGCACGACCCCCAGAAAGAGGCGTCCCACAATAAACACGTCACCTGCTCTTGATCTCTCA 3619
