Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_12574
- Subject:
- XR_427810.4
- Aligned Length:
- 3619
- Identities:
- 1095
- Gaps:
- 2524
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AGCCAGAGCTGGCAAAGAAAGGCTCCAATTCCCAGCCCCCCGCCCCGCGGGGCGCGGGGGCGCCGGCAGCGCAT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GCGCGAGGCCCGGCCCCCAATTCCCCCAGCGAGGGAGGGAGGCCCCCGGCGGCCGGGAGCCTGCGAGCCGCGGC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GGGACCCGAGCGCACGCAGGGGCGCGGCGACGGCGGGGGCTAGTCGGGCTGCGGAGGCGGCCGTCGGGAGTGCG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GAGCGCCTCGGACGAGGGTCCAACCGCCGGCAGGCACCAGAGGGCACGGCTGGCTCGGCACTGGGAGGGGCCCG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GCGCTCGCAGCCCCCCACGCCCAGAGAGGATGCGGTGCGCCCTGAGAGCCGGGTAGCCTCGGATAGCGGCGCTG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CGTACGCGATGATGGATGAGCCGTGGTGGGAAGGGCGCGTCGCCTCGGACGTCCACTGCACCCTGCGCGAGAAG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GAACTGAAGCTGCCCACCTTCCGAGCCCACTCCCCACTCCTGAAGAGCCGCCGGTTCTTCGTGGACATCCTGAC 518
Query 1 ----------------------------------------------------------------------ATGG 4
||||
Sbjct 519 CCTGCTGAGCAGCCACTGCCAGCTCTGCCCTGCAGCCCGGCACCTGGCCGTCTACCTGCTGGACCACTTCATGG 592
Query 5 ATCGCTACAACGTCACCACCTCCAAGCAGCTCTACACCGTGGCCGTCTCCTGCCTCCTGCTTGCAAACGGAGTT 78
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 ATCGCTACAACGTCACCACCTCCAAGCAGCTCTACACCGTGGCCGTCTCCTGCCTCCTGCTTGCAAACGGAGTT 666
Query 79 TCGCTCTTATCGCCCAGGCTGAAGTGCAGTGGCATGATCTCAGCTCATTGCAACCTCCACCTCCCAGGTTCAAG 152
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 TCGCTCTTATCGCCCAGGCTGAAGTGCAGTGGCATGATCTCAGCTCATTGCAACCTCCACCTCCCAGGTTCAAG 740
Query 153 CAATTCTCCTGCTTCAGCGCCCCACCCCCCACCCACACCGCCCCAAGTAGCTGAGACTACAGGTAAGTTCGAGG 226
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 CAATTCTCCTGCTTCAGCGCCCCACCCCCCACCCACACCGCCCCAAGTAGCTGAGACTACAGGTAAGTTCGAGG 814
Query 227 ATCGGGAAGACCACGTCCCCAAGTTGGAGCAAATAAACAGCACGAGGATCCTGAGCAGCCAGAACTTCACCCTC 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 ATCGGGAAGACCACGTCCCCAAGTTGGAGCAAATAAACAGCACGAGGATCCTGAGCAGCCAGAACTTCACCCTC 888
Query 301 ACCAAGAAGGAGCTGCTGAGCACAGAGCTGCTGCTCCTGGAGGCCTTCAGCTGGAACCTCTGCCTGCCCACGCC 374
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 ACCAAGAAGGAGCTGCTGAGCACAGAGCTGCTGCTCCTGGAGGCCTTCAGCTGGAACCTCTGCCTGCCCACGCC 962
Query 375 TGCCCACTTCCTGGACTACTACCTCTTGGCCTCCGTCAGCCAGAAGGACCACCACTGCCACACCTGGCCCACCA 448
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 TGCCCACTTCCTGGACTACTACCTCTTGGCCTCCGTCAGCCAGAAGGACCACCACTGCCACACCTGGCCCACCA 1036
Query 449 CCTGCCCCCGCAAGACCAAAGAGTGCCTCAAGGAGTATGCCCATTACTTCCTAGAGGTCACCCTGCAAGATCAC 522
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 CCTGCCCCCGCAAGACCAAAGAGTGCCTCAAGGAGTATGCCCATTACTTCCTAGAGGTCACCCTGCAAGATCAC 1110
Query 523 ATATTCTACAAATTCCAGCCTTCTGTGGTCGCTGCGGCCTGTGTTGGGGCCTCCAGGATTTGCCTGCAGCTTTC 596
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 ATATTCTACAAATTCCAGCCTTCTGTGGTCGCTGCGGCCTGTGTTGGGGCCTCCAGGATTTGCCTGCAGCTTTC 1184
Query 597 TCCCTACTGGACCAGAGACCTGCAGAGGATCTCAAGCTATTCCCTGGAGCACCTCAGCACGTGTATTGAAATCC 670
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 TCCCTACTGGACCAGAGACCTGCAGAGGATCTCAAGCTATTCCCTGGAGCACCTCAGCACGTGTATTGAAATCC 1258
Query 671 TGCTGGT------------------------------------------------------------------- 677
|||||||
Sbjct 1259 TGCTGGTCCCCCTTTTCAGATGAAAAATCCTAGGCCCCAGCGGTCAATTTGGTTGATATCAGCTAGCTAAGGAG 1332
Query 678 -------------------------------------------------------------------------- 677
Sbjct 1333 TGACCCCGCTGGGGATGGAGCTGGCCCAGAATTGCCTGGAAAGCAGAGATTGGGCTCATTCAGGCCCCAGGAAC 1406
Query 678 ------------------------------------------------------------------AGTGTATG 685
||||||||
Sbjct 1407 ACTCCAGTGCCAGGGGATGGGAAGGCATTGGTGAGCACAAGCAGGCGCCATCCTCCTGGAAGCCAGAGTGTATG 1480
Query 686 ACAACGTCCTCAAGGATGCCGTAGCCGTCAAGAGCCAGGCCTTGGCAATGGTGCCCGGCACACCCCCCACCCCC 759
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 ACAACGTCCTCAAGGATGCCGTAGCCGTCAAGAGCCAGGCCTTGGCAATGGTGCCCGGCACACCCCCCACCCCC 1554
Query 760 ACTCAAGTGCTGTTCCAGCCACCAGCCTACCCGGCCCTCGGCCAGCCAGCGACCACCCTGGCACAGTTCCAGAC 833
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555 ACTCAAGTGCTGTTCCAGCCACCAGCCTACCCGGCCCTCGGCCAGCCAGCGACCACCCTGGCACAGTTCCAGAC 1628
Query 834 CCCCGTGCAGGACCTATGCTTGGCCTATCGGGACTCCTTGCAGGCCCACCGTTCAGGGAGCCTGCTCTCGGGGA 907
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629 CCCCGTGCAGGACCTATGCTTGGCCTATCGGGACTCCTTGCAGGCCCACCGTTCAGGGAGCCTGCTCTCGGGGA 1702
Query 908 GTACAGGCTCATCCCTCCACACCCCGTACCAACCGCTGCAGCCCTTGGATATGTGTCCCGTGCCCGTCCCTGCA 981
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703 GTACAGGCTCATCCCTCCACACCCCGTACCAACCGCTGCAGCCCTTGGATATGTGTCCCGTGCCCGTCCCTGCA 1776
Query 982 TCCCTTAGCATGCATATGGCCATTGCAGCTGAGCCCAGGCACTGCCTCGCCACCACCTATGGAAGCAGCTACTT 1055
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777 TCCCTTAGCATGCATATGGCCATTGCAGCTGAGCCCAGGCACTGCCTCGCCACCACCTATGGAAGCAGCTACTT 1850
Query 1056 CAGTGGGAGCCACATGTTCCCCACCGGCTGCTTTGACAGA---------------------------------- 1095
||||||||||||||||||||||||||||||||||||||||
Sbjct 1851 CAGTGGGAGCCACATGTTCCCCACCGGCTGCTTTGACAGATAGGCCACCTCCAGACCTCACGAGGAAGCCTTGG 1924
Query 1096 -------------------------------------------------------------------------- 1095
Sbjct 1925 AGATGTGGGCAGAGGAAGAGGACACTGAAGAGGAGAGCTCAGCCAAGTGAGGCAGCAGGAGGCCATCCCTGAAG 1998
Query 1096 -------------------------------------------------------------------------- 1095
Sbjct 1999 AGCCTTGGAACGTGGAGGGTCTGTGCTCCTTTTAAATAAAACTGACCCAGAGCAAAACATTCAATAACATACCT 2072
Query 1096 -------------------------------------------------------------------------- 1095
Sbjct 2073 CACCCGAGAGCATTCCTCTGAGAAACGTCTGCCACGTGTGGCTAGGGTACAAAAGGATGGCTTGGTGGCCGTCC 2146
Query 1096 -------------------------------------------------------------------------- 1095
Sbjct 2147 CCCCACACAGGGGCCCAGTGAATCGAGAAAGACTTGATAAGAGGCCAGGAGAGTGGGAACTGGACACAGACCAC 2220
Query 1096 -------------------------------------------------------------------------- 1095
Sbjct 2221 TGATCTCAAGCATGTCCAGTTTTTAGCATTAAAGACTTTTCTATTCTTTGCTGATGGCAGCTACACCGCTGAAA 2294
Query 1096 -------------------------------------------------------------------------- 1095
Sbjct 2295 AAGGAGGGGCAGCCTGGCGTGTTCTCAGGACCCCCGGAGGATCCCATATTGGGTGCTTTTCTTTCCCTGGCTCT 2368
Query 1096 -------------------------------------------------------------------------- 1095
Sbjct 2369 ATGCAGAGGGGCCTGAGTTGGTGTGTATGCCTGAGTGTTTGCCTTGCGAGGCACAGTGGGTGGCTGTCTTGCCT 2442
Query 1096 -------------------------------------------------------------------------- 1095
Sbjct 2443 TTGTTTTCGAACCTAAAACCATTTTCAGCCTTTTAGATATGTCATGTGCTGCTGCTTCCCGAAGTGGTCTTGCT 2516
Query 1096 -------------------------------------------------------------------------- 1095
Sbjct 2517 TTCTGTTTCGTAAGATGTCTTGTTTACACACTGTATCAGGGATTTGGTGATACTTGAAAATTCCTTTGGAGAAA 2590
Query 1096 -------------------------------------------------------------------------- 1095
Sbjct 2591 AAAACAAATTTAATTGCCACACTGCCTGTCCCACATGAGGGCTGTTAATTTGGAACCCAAGTTTGAACCCAACT 2664
Query 1096 -------------------------------------------------------------------------- 1095
Sbjct 2665 TGTGATGGACCCGCAGGTAACCACAGAGCTTCCTTTTTGAAGGCATATGGTTGGAGAGAACCATTTTCCCAGCT 2738
Query 1096 -------------------------------------------------------------------------- 1095
Sbjct 2739 CTCGGTTCCGGAAGATTCCACGTCTTGGAGGCTGTGTTCACCACTAGAACTTTAATAACTACCCAGGGAGGGAG 2812
Query 1096 -------------------------------------------------------------------------- 1095
Sbjct 2813 AAGCTCGTTGAAAGGAAGACAAAGATTTAAACAGTTCCCACCTCTCTCCACCACATACTTACAGGGCATGAGTT 2886
Query 1096 -------------------------------------------------------------------------- 1095
Sbjct 2887 TAACCCAGTCTAGGCTTTGAGTGTGGCTGATAGCGAAGGATAGCAATGTGGAAAATTTGCTTAGTCCCACCTGT 2960
Query 1096 -------------------------------------------------------------------------- 1095
Sbjct 2961 ATTTGGGGAGTGGGATGTACATGGGCGTTTGATACCACCATTGATAGGCAAGCGACTGGTTGGATCAAAAGCCA 3034
Query 1096 -------------------------------------------------------------------------- 1095
Sbjct 3035 GTATTTAGGGATCTGCAGCGAGAGGGCCCTCAGGAAGACTCTTGTAACCATGTGCAATATGTTTTTATTCTGAC 3108
Query 1096 -------------------------------------------------------------------------- 1095
Sbjct 3109 TCGCAGCTTGTGCTCAGCATGTTCTTTGGTTTAGTTTGGGGTTGGGGGACACATTGTTCACCCAGCAGAACTGG 3182
Query 1096 -------------------------------------------------------------------------- 1095
Sbjct 3183 GAGGTGCAAAGGACCGTGGAAGCAATTTTTGTTTTGTTTGAGGAATACCTGTCTTGGATTCCTTAGCCCCTTGC 3256
Query 1096 -------------------------------------------------------------------------- 1095
Sbjct 3257 CAGTCCTGGAGACTGTGGCAGGGGCCGCCAGGAAGGCAGCTGTCTGCTGCTGAGTCAGATCGGAAGGTGGTGAA 3330
Query 1096 -------------------------------------------------------------------------- 1095
Sbjct 3331 TCTTTCCAGAGCAGCTGAAAATCTCAGCATGGAGACAGTAAGAAAAGAGACGGGGTGTGGATAAGACTCTGCCA 3404
Query 1096 -------------------------------------------------------------------------- 1095
Sbjct 3405 CCGTGTCACACTAGCATAGGAGGCTGCACGTTCATTTGTTGTTGTTTTTTTTTCCTTTGCCAACCTCCGTTCTA 3478
Query 1096 -------------------------------------------------------------------------- 1095
Sbjct 3479 TTTATGTGCAAGCAGTTTGGATTCAAGTTCTTGTATCTGTCTGTTCTGGGACCTGGGGATTGTGAGGGTTCCCT 3552
Query 1096 ------------------------------------------------------------------- 1095
Sbjct 3553 CACAGCCAGCACGACCCCCAGAAAGAGGCGTCCCACAATAAACACGTCACCTGCTCTTGATCTCTCA 3619
