Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_12574
- Subject:
- XR_427811.3
- Aligned Length:
- 3522
- Identities:
- 951
- Gaps:
- 2571
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CCCCAGCGAGGGAGGGAGGCCCCCGGCGGCCGGGAGCCTGCGAGCCGCGGCGGGACCCGAGCGCACGCAGGGGC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GCGGCGACGGCGGGGGCTAGTCGGGCTGCGGAGGCGGCCGTCGGGAGTGCGGAGCGCCTCGGACGAGGGTCCAA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCGCCGGCAGGCACCAGAGGGCACGGCTGGCTCGGCACTGGGAGGGGCCCGGCGCTCGCAGCCCCCCACGCCCA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GAGAGGATGCGGTGCGCCCTGAGAGCCGGGTAGCCTCGGATAGCGGCGCTGCGTACGCGATGATGGATGAGCCG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TGGTGGGAAGGGCGCGTCGCCTCGGACGTCCACTGCACCCTGCGCGAGAAGGAACTGAAGCTGCCCACCTTCCG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 AGCCCACTCCCCACTCCTGAAGAGCCGCCGGTTCTTCGTGGACATCCTGACCCTGCTGAGCAGCCACTGCCAGC 444
Query 1 -----------------------------------------------ATGGATCGCTACAACGTCACCACCTCC 27
|||||||||||||||||||||||||||
Sbjct 445 TCTGCCCTGCAGCCCGGCACCTGGCCGTCTACCTGCTGGACCACTTCATGGATCGCTACAACGTCACCACCTCC 518
Query 28 AAGCAGCTCTACACCGTGGCCGTCTCCTGCCTCCTGCTTGCAAACGGAGTTTCGCTCTTATCGCCCAGGCTGAA 101
|||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 AAGCAGCTCTACACCGTGGCCGTCTCCTGCCTCCTGCTTGCAA------------------------------- 561
Query 102 GTGCAGTGGCATGATCTCAGCTCATTGCAACCTCCACCTCCCAGGTTCAAGCAATTCTCCTGCTTCAGCGCCCC 175
Sbjct 562 -------------------------------------------------------------------------- 561
Query 176 ACCCCCCACCCACACCGCCCCAAGTAGCTGAGACTACAGGTAAGTTCGAGGATCGGGAAGACCACGTCCCCAAG 249
|||||||||||||||||||||||||||||||||||
Sbjct 562 ---------------------------------------GTAAGTTCGAGGATCGGGAAGACCACGTCCCCAAG 596
Query 250 TTGGAGCAAATAAACAGCACGAGGATCCTGAGCAGCCAGAACTTCACCCTCACCAAGAAGGAGCTGCTGAGCAC 323
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 597 TTGGAGCAAATAAACAGCACGAGGATCCTGAGCAGCCAGAACTTCACCCTCACCAAGAAGGAGCTGCTGAGCAC 670
Query 324 AGAGCTGCTGCTCCTGGAGGCCTTCAGCTGGAACCTCTGCCTGCCCACGCCTGCCCACTTCCTGGACTACTACC 397
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 671 AGAGCTGCTGCTCCTGGAGGCCTTCAGCTGGAACCTCTGCCTGCCCACGCCTGCCCACTTCCTGGACTACTACC 744
Query 398 TCTTGGCCTCCGTCAGCCAGAAGGACCACCACTGCCACACCTGGCCCACCACCTGCCCCCGCAAGACCAAAGAG 471
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 745 TCTTGGCCTCCGTCAGCCAGAAGGACCACCACTGCCACACCTGGCCCACCACCTGCCCCCGCAAGACCAAAGAG 818
Query 472 TGCCTCAAGGAGTATGCCCATTACTTCCTAGAGGTCACCCTGCAAGATCACATATTCTACAAATTCCAGCCTTC 545
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 819 TGCCTCAAGGAGTATGCCCATTACTTCCTAGAGGTCACCCTGCAAGATCACATATTCTACAAATTCCAGCCTTC 892
Query 546 TGTGGTCGCTGCGGCCTGTGTTGGGGCCTCCAGGATTTGCCTGCAGCTTTCTCCCTACTGGACCAGAGACCTGC 619
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 893 TGTGGTCGCTGCGGCCTGTGTTGGGGCCTCCAGGATTTGCCTGCAGCTTTCTCCCTACTGGACCAGAGACCTGC 966
Query 620 AGAGGATCTCAAGCTATTCCCTGGAGCACCTCAGCACGTGTATTGAAATCCTGCTGGT---------------- 677
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 967 AGAGGATCTCAAGCTATTCCCTGGAGCACCTCAGCACGTGTATTGAAATCCTGCTGGTCCCCCTTTTCAGATGA 1040
Query 678 -------------------------------------------------------------------------- 677
Sbjct 1041 AAAATCCTAGGCCCCAGCGGTCAATTTGGTTGATATCAGCTAGCTAAGGAGTGACCCCGCTGGGGATGGAGCTG 1114
Query 678 -------------------------------------------------------------------------- 677
Sbjct 1115 GCCCAGAATTGCCTGGAAAGCAGAGATTGGGCTCATTCAGGCCCCAGGAACACTCCAGTGCCAGGGGATGGGAA 1188
Query 678 -------------------------------------------AGTGTATGACAACGTCCTCAAGGATGCCGTA 708
|||||||||||||||||||||||||||||||
Sbjct 1189 GGCATTGGTGAGCACAAGCAGGCGCCATCCTCCTGGAAGCCAGAGTGTATGACAACGTCCTCAAGGATGCCGTA 1262
Query 709 GCCGTCAAGAGCCAGGCCTTGGCAATGGTGCCCGGCACACCCCCCACCCCCACTCAAGTGCTGTTCCAGCCACC 782
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1263 GCCGTCAAGAGCCAGGCCTTGGCAATGGTGCCCGGCACACCCCCCACCCCCACTCAAGTGCTGTTCCAGCCACC 1336
Query 783 AGCCTACCCGGCCCTCGGCCAGCCAGCGACCACCCTGGCACAGTTCCAGACCCCCGTGCAGGACCTATGCTTGG 856
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1337 AGCCTACCCGGCCCTCGGCCAGCCAGCGACCACCCTGGCACAGTTCCAGACCCCCGTGCAGGACCTATGCTTGG 1410
Query 857 CCTATCGGGACTCCTTGCAGGCCCACCGTTCAGGGAGCCTGCTCTCGGGGAGTACAGGCTCATCCCTCCACACC 930
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1411 CCTATCGGGACTCCTTGCAGGCCCACCGTTCAGGGAGCCTGCTCTCGGGGAGTACAGGCTCATCCCTCCACACC 1484
Query 931 CCGTACCAACCGCTGCAGCCCTTGGATATGTGTCCCGTGCCCGTCCCTGCATCCCTTAGCATGCATATGGCCAT 1004
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1485 CCGTACCAACCGCTGCAGCCCTTGGATATGTGTCCCGTGCCCGTCCCTGCATCCCTTAGCATGCATATGGCCAT 1558
Query 1005 TGCAGCTGAGCCCAGGCACTGCCTCGCCACCACCTATGGAAGCAGCTACTTCAGTGGGAGCCACATGTTCCCCA 1078
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1559 TGCAGCTGAGCCCAGGCACTGCCTCGCCACCACCTATGGAAGCAGCTACTTCAGTGGGAGCCACATGTTCCCCA 1632
Query 1079 CCGGCTGCTTTGACAGA--------------------------------------------------------- 1095
|||||||||||||||||
Sbjct 1633 CCGGCTGCTTTGACAGATAGGCCACCTCCAGACCTCACGAGGAAGCCTTGGAGATGTGGGCAGAGGAAGAGGAC 1706
Query 1096 -------------------------------------------------------------------------- 1095
Sbjct 1707 ACTGAAGAGGAGAGCTCAGCCAAGTGAGGCAGCAGGAGGCCATCCCTGAAGAGCCTTGGAACGTGGAGGGTCTG 1780
Query 1096 -------------------------------------------------------------------------- 1095
Sbjct 1781 TGCTCCTTTTAAATAAAACTGACCCAGAGCAAAACATTCAATAACATACCTCACCCGAGAGCATTCCTCTGAGA 1854
Query 1096 -------------------------------------------------------------------------- 1095
Sbjct 1855 AACGTCTGCCACGTGTGGCTAGGGTACAAAAGGATGGCTTGGTGGCCGTCCCCCCACACAGGGGCCCAGTGAAT 1928
Query 1096 -------------------------------------------------------------------------- 1095
Sbjct 1929 CGAGAAAGACTTGATAAGAGGCCAGGAGAGTGGGAACTGGACACAGACCACTGATCTCAAGCATGTCCAGTTTT 2002
Query 1096 -------------------------------------------------------------------------- 1095
Sbjct 2003 TAGCATTAAAGACTTTTCTATTCTTTGCTGATGGCAGCTACACCGCTGAAAAAGGAGGGGCAGCCTGGCGTGTT 2076
Query 1096 -------------------------------------------------------------------------- 1095
Sbjct 2077 CTCAGGACCCCCGGAGGATCCCATATTGGGTGCTTTTCTTTCCCTGGCTCTATGCAGAGGGGCCTGAGTTGGTG 2150
Query 1096 -------------------------------------------------------------------------- 1095
Sbjct 2151 TGTATGCCTGAGTGTTTGCCTTGCGAGGCACAGTGGGTGGCTGTCTTGCCTTTGTTTTCGAACCTAAAACCATT 2224
Query 1096 -------------------------------------------------------------------------- 1095
Sbjct 2225 TTCAGCCTTTTAGATATGTCATGTGCTGCTGCTTCCCGAAGTGGTCTTGCTTTCTGTTTCGTAAGATGTCTTGT 2298
Query 1096 -------------------------------------------------------------------------- 1095
Sbjct 2299 TTACACACTGTATCAGGGATTTGGTGATACTTGAAAATTCCTTTGGAGAAAAAAACAAATTTAATTGCCACACT 2372
Query 1096 -------------------------------------------------------------------------- 1095
Sbjct 2373 GCCTGTCCCACATGAGGGCTGTTAATTTGGAACCCAAGTTTGAACCCAACTTGTGATGGACCCGCAGGTAACCA 2446
Query 1096 -------------------------------------------------------------------------- 1095
Sbjct 2447 CAGAGCTTCCTTTTTGAAGGCATATGGTTGGAGAGAACCATTTTCCCAGCTCTCGGTTCCGGAAGATTCCACGT 2520
Query 1096 -------------------------------------------------------------------------- 1095
Sbjct 2521 CTTGGAGGCTGTGTTCACCACTAGAACTTTAATAACTACCCAGGGAGGGAGAAGCTCGTTGAAAGGAAGACAAA 2594
Query 1096 -------------------------------------------------------------------------- 1095
Sbjct 2595 GATTTAAACAGTTCCCACCTCTCTCCACCACATACTTACAGGGCATGAGTTTAACCCAGTCTAGGCTTTGAGTG 2668
Query 1096 -------------------------------------------------------------------------- 1095
Sbjct 2669 TGGCTGATAGCGAAGGATAGCAATGTGGAAAATTTGCTTAGTCCCACCTGTATTTGGGGAGTGGGATGTACATG 2742
Query 1096 -------------------------------------------------------------------------- 1095
Sbjct 2743 GGCGTTTGATACCACCATTGATAGGCAAGCGACTGGTTGGATCAAAAGCCAGTATTTAGGGATCTGCAGCGAGA 2816
Query 1096 -------------------------------------------------------------------------- 1095
Sbjct 2817 GGGCCCTCAGGAAGACTCTTGTAACCATGTGCAATATGTTTTTATTCTGACTCGCAGCTTGTGCTCAGCATGTT 2890
Query 1096 -------------------------------------------------------------------------- 1095
Sbjct 2891 CTTTGGTTTAGTTTGGGGTTGGGGGACACATTGTTCACCCAGCAGAACTGGGAGGTGCAAAGGACCGTGGAAGC 2964
Query 1096 -------------------------------------------------------------------------- 1095
Sbjct 2965 AATTTTTGTTTTGTTTGAGGAATACCTGTCTTGGATTCCTTAGCCCCTTGCCAGTCCTGGAGACTGTGGCAGGG 3038
Query 1096 -------------------------------------------------------------------------- 1095
Sbjct 3039 GCCGCCAGGAAGGCAGCTGTCTGCTGCTGAGTCAGATCGGAAGGTGGTGAATCTTTCCAGAGCAGCTGAAAATC 3112
Query 1096 -------------------------------------------------------------------------- 1095
Sbjct 3113 TCAGCATGGAGACAGTAAGAAAAGAGACGGGGTGTGGATAAGACTCTGCCACCGTGTCACACTAGCATAGGAGG 3186
Query 1096 -------------------------------------------------------------------------- 1095
Sbjct 3187 CTGCACGTTCATTTGTTGTTGTTTTTTTTTCCTTTGCCAACCTCCGTTCTATTTATGTGCAAGCAGTTTGGATT 3260
Query 1096 -------------------------------------------------------------------------- 1095
Sbjct 3261 CAAGTTCTTGTATCTGTCTGTTCTGGGACCTGGGGATTGTGAGGGTTCCCTCACAGCCAGCACGACCCCCAGAA 3334
Query 1096 -------------------------------------------- 1095
Sbjct 3335 AGAGGCGTCCCACAATAAACACGTCACCTGCTCTTGATCTCTCA 3378
