Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_12575
Subject:
XR_001745589.1
Aligned Length:
2687
Identities:
926
Gaps:
1760

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ACCCCGAAACAGTAGGTAGAGGTATCTTGTCTTCGTGTGAATTAGATGAATAATTGCTGAAGATTCGGGGGGCC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  TGGGGTGGGGGTCGGGAGTGCTGGATTGTGTACGCGTCTGTGTGTGTCTACTAAGGAGACGGAATGTCTGTTAT  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GTATCTGGAGATAGGGCGACTTATTTTCGTAGCAGGAGGAACTGTTGGAAATTATTTGCGGGAGAGGGGGTGCG  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  CCGAAAGGCGCTGCTTGTATTTTTCTTCTACTCCACCCTGTTCTGTCTTGCATTTGCCTGAAAGCTGGTGGAAT  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  GGAACAGTGAAGAAGCATTGGAATGGTAGATAACGCAGATCATCTCTGGAAAGGATATTGATCCGCCTCATGTA  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  AAGTATGCTTAGTTCCTTTCCAGTGGTTTTGCTGGAAACCATGTCTCATTATACAGATGAACCCAGATTTACCA  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  TAGAGCAGATAGATCTGCTTCAGCGACTTCGGCGTACTGGAATGACTAAACATGAAATTCTCCATGCCTTGGAA  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  ACTTTGGACCGTCTTGATCAAGAGCATAGTGACAAGTTTGGAAGAAGGTCCAGCTATGGAGGAAGTTCATATGG  592

Query    1  ----------------------------------------------------------------------ATGT  4
                                                                                  ||||
Sbjct  593  GAATAGTACTAACAATGTCCCAGCATCTTCCTCTACAGCTACAGCTTCCACACAGACGCAGCATTCGGGAATGT  666

Query    5  CCCCGTCACCTAGCAACAGTTATGATACTTCCCCACAGCCTTGCACTACCAATCAAAATGGGAGGGAGAATAAT  78
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  CCCCGTCACCTAGCAACAGTTATGATACTTCCCCACAGCCTTGCACTACCAATCAAAATGGGAGGGAGAATAAT  740

Query   79  GAGCGATTATCTACATCCAATGGAAAGATGTCACCAACTCGCTACCATGCAAACAGCATGGGTCAGAGGTCATA  152
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  GAGCGATTATCTACATCCAATGGAAAGATGTCACCAACTCGCTACCATGCAAACAGCATGGGTCAGAGGTCATA  814

Query  153  CAGTTTTGAAGCCTCAGAAGAGGACCTAGATGTAGATGATAAAGTGGAAGAATTAATGAGGAGGGACAGCAGTG  226
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  CAGTTTTGAAGCCTCAGAAGAGGACCTAGATGTAGATGATAAAGTGGAAGAATTAATGAGGAGGGACAGCAGTG  888

Query  227  TGATAAAAGAGGAAATCAAAGCCTTTCTTGCCAATCGGAGGATTTCCCAAGCAGTTGTTGCACAGGTAACAGGT  300
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  TGATAAAAGAGGAAATCAAAGCCTTTCTTGCCAATCGGAGGATTTCCCAAGCAGTTGTTGCACAGGTAACAGGT  962

Query  301  ATCAGTCAGAGCCGGATCTCTCATTGGCTGTTGCAGCAGGGATCAGACCTGAGTGAACAGAAGAAAAGAGCATT  374
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  ATCAGTCAGAGCCGGATCTCTCATTGGCTGTTGCAGCAGGGATCAGACCTGAGTGAACAGAAGAAAAGAGCATT  1036

Query  375  TTACCGATGGTATCAACTTGAGAAGACAAACCCTGGCGCTACACTAAGTATGAGACCAGCCCCCATTCCAATAG  448
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  TTACCGATGGTATCAACTTGAGAAGACAAACCCTGGCGCTACACTAAGTATGAGACCAGCCCCCATTCCAATAG  1110

Query  449  AGGACCCTGAATGGAGACAAACGCCTCCCCCAGTCTCTGCCACATCTGGTACTTTCCGACTGCGACGAGGGAGT  522
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111  AGGACCCTGAATGGAGACAAACGCCTCCCCCAGTCTCTGCCACATCTGGTACTTTCCGACTGCGACGAGGGAGT  1184

Query  523  CGATTTACCTGGAGAAAGGAGTGCCTGGCTGTTATGGAAAGTTACTTCAATGAGAATCAATACCCAGATGAAGC  596
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185  CGATTTACCTGGAGAAAGGAGTGCCTGGCTGTTATGGAAAGTTACTTCAATGAGAATCAATACCCAGATGAAGC  1258

Query  597  AAAGAGGGAAGAAATTGCAAACGCTTGCAATGCAGTTATACAGAAGCCAGGCAAAAAGCTGTCAGATCTGGAAA  670
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259  AAAGAGGGAAGAAATTGCAAACGCTTGCAATGCAGTTATACAGAAGCCAGGCAAAAAGCTGTCAGATCTGGAAA  1332

Query  671  GAGTTACCTCCCTGAAAGTATATAATTGGTTTGCTAACAGAAGGAAGGAGATCAAGAGGAGAGCCAATATT---  741
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   
Sbjct 1333  GAGTTACCTCCCTGAAAGTATATAATTGGTTTGCTAACAGAAGGAAGGAGATCAAGAGGAGAGCCAATATTGAA  1406

Query  742  GCAGCAATCCTGGAGAGTCATGGGATAGATGTGCAGAGTCCAGGAGGCCACTCAAACAGTGATGATGTCGACGG  815
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407  GCAGCAATCCTGGAGAGTCATGGGATAGATGTGCAGAGTCCAGGAGGCCACTCAAACAGTGATGATGTCGACGG  1480

Query  816  GAATGACTACTCTGAGCAGGATACTTGGCAAGTACGCAATGGGGAGGAGGAGGAGGGAAGAAGTTCAGAGGGAG  889
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481  GAATGACTACTCTGAGCAGGATACTTGGCAAGTACGCAATGGGGAGGAGGAGGAGGGAAGAAGTTCAGAGGGAG  1554

Query  890  GCAGAGAAGCAGAGAAGGTAGAAGAAGAGCGGAGGATC------------------------------------  927
            |||||||||||||||||||||||||||||.||||||||                                    
Sbjct 1555  GCAGAGAAGCAGAGAAGGTAGAAGAAGAGAGGAGGATCTGATCCAAACAAGCAAGTTACACCATTCACGACACA  1628

Query  928  --------------------------------------------------------------------------  927
                                                                                      
Sbjct 1629  CACTCAGTGTTTGAGAAATACTAGGGGCAGCTGGACCCCATGCCTAAACACGTACCGACGCAGGGCACGATGGA  1702

Query  928  --------------------------------------------------------------------------  927
                                                                                      
Sbjct 1703  AGGCCCCACTCACTCTGGCCCCACTGCAGTGGGAACCCTCCTGCCCAAAGGAGTGGTTCTTCCAGAGTCTCTGG  1776

Query  928  --------------------------------------------------------------------------  927
                                                                                      
Sbjct 1777  CACACTGACACATGCATCCTCTCATAAGTGCAATACCTGCATGACTCTTCACCTCGCCCTGATTTATTCTGCAT  1850

Query  928  --------------------------------------------------------------------------  927
                                                                                      
Sbjct 1851  TGCTTTTGGGGAAAATGTATTTAATTGTAGCCACTGCGTGGAGTAATTCAGTAACTAAGACTGTGGGAGTCCCT  1924

Query  928  --------------------------------------------------------------------------  927
                                                                                      
Sbjct 1925  CCTCGACCCCCACATAGATGTTGACAGATTTCATTAAAATTTTGATAGGATTTAAATTTCCATTTGGAATATGC  1998

Query  928  --------------------------------------------------------------------------  927
                                                                                      
Sbjct 1999  AGAGAACGCATGGTACCTTCCCCTAGACCACAGCAAGAAAACTTCTGCTCATTTTTCTGGGGTCTGTGCTTTTT  2072

Query  928  --------------------------------------------------------------------------  927
                                                                                      
Sbjct 2073  TCTTGCTCCTCAGCCAGCTCATATAGTCCAATGTGTTCTTTAATAGCCTCTGTTTACCACACACCTAGAATGCA  2146

Query  928  --------------------------------------------------------------------------  927
                                                                                      
Sbjct 2147  TGCAAGTGTGTGCTGATCCCTTTGTAAATTCTAAAAACTAATCTGTGAACATCAGAAGGAAACAATGATGTCCA  2220

Query  928  --------------------------------------------------------------------------  927
                                                                                      
Sbjct 2221  CACTTCTGAAGAACTACCATTTTTTCCCATTTAGGACTCTAGTTAATAGCCCCAAGAGAATATTCTGTAAGTCT  2294

Query  928  --------------------------------------------------------------------------  927
                                                                                      
Sbjct 2295  TTCTGTTCGGAAACATTCCTCTTTTCAGTCTACCCACATAGATGGATCATTTCCATCTTTTTTTACAGATGCCC  2368

Query  928  --------------------------------------------------------------------------  927
                                                                                      
Sbjct 2369  TAAGGGCAGCACATTCCATGTTTTGTTTGTTTTTTTCCTTAAGGGACTTACCCTTTCCAAAGCTCTTTGATACG  2442

Query  928  --------------------------------------------------------------------------  927
                                                                                      
Sbjct 2443  GAGTTCCCCTGAAGATGACAGGTGAGAAACATACCCCTTATTTGTAACACCATCTTCAGTGCCTGACGTACATC  2516

Query  928  --------------------------------------------------------------------------  927
                                                                                      
Sbjct 2517  CTGCAATGCCAGCTTCCTTCACAGCTTTATTGTTTAACACATTGAGCTGCGCGGGGAGGACAGCTTCACACTAG  2590

Query  928  --------------------------------------------------------------------------  927
                                                                                      
Sbjct 2591  TTCTAGGATGACAGTACGAGCCATAGTGACCACCAAGACCCCATCTCATTAGCTGTGGAAATGGCAGCAGTCAA  2664

Query  928  -----------------------  927
                                   
Sbjct 2665  CCACACTATCTTGGCATTGGCCC  2687

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