Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_12575
- Subject:
- XR_001745593.1
- Aligned Length:
- 2652
- Identities:
- 923
- Gaps:
- 1728
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 TGTTGATATCAATATGGCGGTTGTCAGCCAGACAAAGACAGTCAGTCTGATGTGATTGAGACAAGGGAGGTTTT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TCAGGGGGAGACTGGGAGATAGGGGCCTCCCCTCCCCCTTCTCCTCTTCCTGCGCCGGCCTCAACCCCTCCCCA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GTCCCCTCCCGACGGGCGCCCCACGCGGAAGACACCCCTCCCCCTCCCGCCTTCCCTCCTCCCTATCTCAGCCC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TTCGTACTGGGACGTTGGGGAGGGGGCTGTGCCGGGCGGAGAGAACTCAGCGAGGATTCTGAGAATGGTAGATA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 ACGCAGATCATCTCTGGAAAGGATATTGATCCGCCTCATGTAAAGTATGCTTAGTTCCTTTCCAGTGGTTTTGC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TGGAAACCATGTCTCATTATACAGATGAACCCAGATTTACCATAGAGCAGATAGATCTGCTTCAGCGACTTCGG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CGTACTGGAATGACTAAACATGAAATTCTCCATGCCTTGGAAACTTTGGACCGTCTTGATCAAGAGCATAGTGA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CAAGTTTGGAAGAAGGTCCAGCTATGGAGGAAGTTCATATGGGAATAGTACTAACAATGTCCCAGCATCTTCCT 592
Query 1 --------------------------------------ATGTCCCCGTCACCTAGCAACAGTTATGATACTTCC 36
||||||||||||||||||||||||||||||||||||
Sbjct 593 CTACAGCTACAGCTTCCACACAGACGCAGCATTCGGGAATGTCCCCGTCACCTAGCAACAGTTATGATACTTCC 666
Query 37 CCACAGCCTTGCACTACCAATCAAAATGGGAGGGAGAATAATGAGCGATTATCTACATCCAATGGAAAGATGTC 110
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 CCACAGCCTTGCACTACCAATCAAAATGGGAGGGAGAATAATGAGCGATTATCTACATCCAATGGAAAGATGTC 740
Query 111 ACCAACTCGCTACCATGCAAACAGCATGGGTCAGAGGTCATACAGTTTTGAAGCCTCAGAAGAGGACCTAGATG 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 ACCAACTCGCTACCATGCAAACAGCATGGGTCAGAGGTCATACAGTTTTGAAGCCTCAGAAGAGGACCTAGATG 814
Query 185 TAGATGATAAAGTGGAAGAATTAATGAGGAGGGACAGCAGTGTGATAAAAGAGGAAATCAAAGCCTTTCTTGCC 258
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 TAGATGATAAAGTGGAAGAATTAATGAGGAGGGACAGCAGTGTGATAAAAGAGGAAATCAAAGCCTTTCTTGCC 888
Query 259 AATCGGAGGATTTCCCAAGCAGTTGTTGCACAGGTAACAGGTATCAGTCAGAGCCGGATCTCTCATTGGCTGTT 332
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 AATCGGAGGATTTCCCAAGCAGTTGTTGCACAGGTAACAGGTATCAGTCAGAGCCGGATCTCTCATTGGCTGTT 962
Query 333 GCAGCAGGGATCAGACCTGAGTGAACAGAAGAAAAGAGCATTTTACCGATGGTATCAACTTGAGAAGACAAACC 406
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 GCAGCAGGGATCAGACCTGAGTGAACAGAAGAAAAGAGCATTTTACCGATGGTATCAACTTGAGAAGACAAACC 1036
Query 407 CTGGCGCTACACTAAGTATGAGACCAGCCCCCATTCCAATAGAGGACCCTGAATGGAGACAAACGCCTCCCCCA 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 CTGGCGCTACACTAAGTATGAGACCAGCCCCCATTCCAATAGAGGACCCTGAATGGAGACAAACGCCTCCCCCA 1110
Query 481 GTCTCTGCCACATCTGGTACTTTCCGACTGCGACGAGGGAGTCGATTTACCTGGAGAAAGGAGTGCCTGGCTGT 554
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 GTCTCTGCCACATCTGGTACTTTCCGACTGCGACGAGGGAGTCGATTTACCTGGAGAAAGGAGTGCCTGGCTGT 1184
Query 555 TATGGAAAGTTACTTCAATGAGAATCAATACCCAGATGAAGCAAAGAGGGAAGAAATTGCAAACGCTTGCAATG 628
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 TATGGAAAGTTACTTCAATGAGAATCAATACCCAGATGAAGCAAAGAGGGAAGAAATTGCAAACGCTTGCAATG 1258
Query 629 CAGTTATACAGAAGCCAGGCAAAAAGCTGTCAGATCTGGAAAGAGTTACCTCCCTGAAAGTATATAATTGGTTT 702
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 CAGTTATACAGAAGCCAGGCAAAAAGCTGTCAGATCTGGAAAGAGTTACCTCCCTGAAAGTATATAATTGGTTT 1332
Query 703 GCTAACAGAAGGAAGGAGATCAAGAGGAGAGCCAATATTGCAGCAATCCTGGAGAGTCATGGGATAGATGTGCA 776
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1333 GCTAACAGAAGGAAGGAGATCAAGAGGAGAGCCAATATT---GCAATCCTGGAGAGTCATGGGATAGATGTGCA 1403
Query 777 GAGTCCAGGAGGCCACTCAAACAGTGATGATGTCGACGGGAATGACTACTCTGAGCAGGATACTTGGCAAGTAC 850
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1404 GAGTCCAGGAGGCCACTCAAACAGTGATGATGTCGACGGGAATGACTACTCTGAGCAGGATACTTGGCAAGTAC 1477
Query 851 GCAATGGGGAGGAGGAGGAGGGAAGAAGTTCAGAGGGAGGCAGAGAAGCAGAGAAGGTAGAAGAAGAGCGGAGG 924
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||
Sbjct 1478 GCAATGGGGAGGAGGAGGAGGGAAGAAGTTCAGAGGGAGGCAGAGAAGCAGAGAAGGTAGAAGAAGAGAGGAGG 1551
Query 925 ATC----------------------------------------------------------------------- 927
|||
Sbjct 1552 ATCTGATCCAAACAAGCAAGTTACACCATTCACGACACACACTCAGTGTTTGAGAAATACTAGGGGCAGCTGGA 1625
Query 928 -------------------------------------------------------------------------- 927
Sbjct 1626 CCCCATGCCTAAACACGTACCGACGCAGGGCACGATGGAAGGCCCCACTCACTCTGGCCCCACTGCAGTGGGAA 1699
Query 928 -------------------------------------------------------------------------- 927
Sbjct 1700 CCCTCCTGCCCAAAGGAGTGGTTCTTCCAGAGTCTCTGGCACACTGACACATGCATCCTCTCATAAGTGCAATA 1773
Query 928 -------------------------------------------------------------------------- 927
Sbjct 1774 CCTGCATGACTCTTCACCTCGCCCTGATTTATTCTGCATTGCTTTTGGGGAAAATGTATTTAATTGTAGCCACT 1847
Query 928 -------------------------------------------------------------------------- 927
Sbjct 1848 GCGTGGAGTAATTCAGTAACTAAGACTGTGGGAGTCCCTCCTCGACCCCCACATAGATGTTGACAGATTTCATT 1921
Query 928 -------------------------------------------------------------------------- 927
Sbjct 1922 AAAATTTTGATAGGATTTAAATTTCCATTTGGAATATGCAGAGAACGCATGGTACCTTCCCCTAGACCACAGCA 1995
Query 928 -------------------------------------------------------------------------- 927
Sbjct 1996 AGAAAACTTCTGCTCATTTTTCTGGGGTCTGTGCTTTTTTCTTGCTCCTCAGCCAGCTCATATAGTCCAATGTG 2069
Query 928 -------------------------------------------------------------------------- 927
Sbjct 2070 TTCTTTAATAGCCTCTGTTTACCACACACCTAGAATGCATGCAAGTGTGTGCTGATCCCTTTGTAAATTCTAAA 2143
Query 928 -------------------------------------------------------------------------- 927
Sbjct 2144 AACTAATCTGTGAACATCAGAAGGAAACAATGATGTCCACACTTCTGAAGAACTACCATTTTTTCCCATTTAGG 2217
Query 928 -------------------------------------------------------------------------- 927
Sbjct 2218 ACTCTAGTTAATAGCCCCAAGAGAATATTCTGTAAGTCTTTCTGTTCGGAAACATTCCTCTTTTCAGTCTACCC 2291
Query 928 -------------------------------------------------------------------------- 927
Sbjct 2292 ACATAGATGGATCATTTCCATCTTTTTTTACAGATGCCCTAAGGGCAGCACATTCCATGTTTTGTTTGTTTTTT 2365
Query 928 -------------------------------------------------------------------------- 927
Sbjct 2366 TCCTTAAGGGACTTACCCTTTCCAAAGCTCTTTGATACGGAGTTCCCCTGAAGATGACAGGTGAGAAACATACC 2439
Query 928 -------------------------------------------------------------------------- 927
Sbjct 2440 CCTTATTTGTAACACCATCTTCAGTGCCTGACGTACATCCTGCAATGCCAGCTTCCTTCACAGCTTTATTGTTT 2513
Query 928 -------------------------------------------------------------------------- 927
Sbjct 2514 AACACATTGAGCTGCGCGGGGAGGACAGCTTCACACTAGTTCTAGGATGACAGTACGAGCCATAGTGACCACCA 2587
Query 928 -------------------------------------------------------------- 927
Sbjct 2588 AGACCCCATCTCATTAGCTGTGGAAATGGCAGCAGTCAACCACACTATCTTGGCATTGGCCC 2649
