Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_12587
- Subject:
- NM_024611.6
- Aligned Length:
- 2946
- Identities:
- 995
- Gaps:
- 1950
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGAGCTCCAAGATGGTCATAAGTGAACCAGGACTGAATTGGGATATTTCCCCCAAAAATGGCCTTAAGACATT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TTTCTCTCGAGAAAATTATAAAGATCATTCCATGGCTCCAAGTTTAAAAGAACTACGTGTTTTATCCAACAGAC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GTATAGGAGAAAATTTGAATGCCTCAGCAAGTTCTGTAGAAAATGAGCCGGCAGTTAGTTCAGCAACTCAAGCA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AAGGAAAAAGTTAAAACCACAATTGGAATGGTTCTTCTTCCAAAACCAAGAGTTCCTTATCCTCGTTTCTCTCG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TTTCTCACAGAGAGAGCAGAGGAGTTATGTGGACTTGTTGGTTAAATACGCAAAGATTCCTGCAAATTCCAAAG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CTGTTGGAATAAATAAAAATGACTACTTGCAGTACTTGGATATGAAAAAACATGTGAACGAAGAAGTTACTGAG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TTCCTAAAGTTTTTGCAGAATTCTGCAAAGAAATGTGCGCAGGATTATAATATGCTTTCTGATGATGCCCGTCT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CTTCACAGAGAAAATTTTAAGAGCTTGCATTGAACAAGTGAAAAAGTATTCAGAATTCTATACTCTCCACGAGG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TCACCAGCTTAATGGGATTCTTCCCATTCAGAGTAGAGATGGGATTAAAGTTAGAAAAAACTCTTCTCGCATTG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GGCAGTGTAAAATATGTGAAAACAGTATTTCCCTCAATGCCTATAAAGTTGCAGCTGTCAAAGGACGATATAGC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TACCATTGAAACGTCAGAACAAACAGCTGAAGCTATGCATTATGATATTAGTAAAGATCCAAATGCAGAGAAGC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 TTGTTTCCAGATATCACCCTCAGATAGCTCTAACTAGTCAGTCATTATTTACCTTATTAAATAATCATGGACCA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 ACGTACAAGGAACAGTGGGAAATTCCAGTGTGTATTCAAGTAATACCTGTTGCAGGTTCAAAACCAGTTAAAGT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 AATATATATTAATTCACCACTTCCCCAAAAGAAAATGACTATGAGAGAGAGAAATCAAATCTTTCATGAAGTTC 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CATTAAAATTTATGATGTCCAAAAACACATCTGTTCCAGTCTCTGCAGTCTTTATGGACAAACCTGAAGAGTTT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 ATATCTGAAATGGACATGTCCTGTGAAGTCAACGAGTGCCGAAAAATTGAGAGTCTTGAAAACTTGTATTTGGA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 TTTTGATGATGATGTCACAGAACTTGAAACTTTTGGAGTAACCACCACCAAAGTATCAAAATCACCAAGTCCAG 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 CAAGTACTTCCACAGTACCTAACATGACAGATGCTCCTACAGCCCCCAAAGCAGGAACTACAACTGTGGCACCA 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 AGTGCACCAGACATTTCTGCTAATTCTAGAAGTTTATCTCAGATTCTGATGGAACAATTGCAAAAGGAGAAACA 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 GCTGGTCACTGGTATGGATGGTGGCCCTGAGGAATGCAAAAATAAAGATGATCAGGGATTTGAATCATGTGAAA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 AGGTATCAAATTCTGACAAGCCTTTGATACAAGATAGTGACTTGAAAACATCTGATGCCTTACAGTTAGAAAAT 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 TCTCAGGAAATTGAAACTTCTAATAAAAATGATATGACTATAGATATATTACATGCTGATGGTGAAAGACCTAA 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 TGTTCTAGAAAACCTAGACAACTCAAAGGAAAAGACTGTTGGATCAGAAGCAGCAAAAACTGAAGATACAGTTC 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 TCTGCAGCAGTGATACAGATGAGGAGTGTTTAATCATTGATACAGAATGTAAAAATAATAGTGATGGAAAGACA 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 GCTGTTGTGGGTTCTAACTTAAGTTCCAGACCAGCTAGTCCAAATTCTTCCTCAGGACAGGCTTCTGTAGGAAA 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 CCAGACTAATACTGCTTGTAGTCCTGAAGAGTCATGTGTTTTAAAAAAACCTATCAAACGAGTATATAAAAAAT 1924
Query 1 --------------------------ATGCAGGATGAGCTCTTAAAGCCAATTTCCAGAAAAGTACCAGAATTG 48
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1925 TTGATCCAGTTGGAGAGATTTTAAAAATGCAGGATGAGCTCTTAAAGCCAATTTCCAGAAAAGTACCAGAATTG 1998
Query 49 CCCTTAATGAATTTAGAAAATTCTAAACAGCCTTCTGTTTCTGAGCAATTGTCTGGTCCTTCAGACTCCTCTAG 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1999 CCCTTAATGAATTTAGAAAATTCTAAACAGCCTTCTGTTTCTGAGCAATTGTCTGGTCCTTCAGACTCCTCTAG 2072
Query 123 TTGGCCGAAATCTGGATGGCCTTCTGCATTTCAGAAGCCAAAAGGACGATTGCCATATGAACTTCAGGACTATG 196
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2073 TTGGCCGAAATCTGGATGGCCTTCTGCATTTCAGAAGCCAAAAGGACGATTGCCATATGAACTTCAGGACTATG 2146
Query 197 TTGAAGATACATCGGAATACCTAGCTCCTCAGGAAGGAAATTTTGTTTATAAGTTATTTAGCCTGCAAGACCTG 270
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2147 TTGAAGATACATCGGAATACCTAGCTCCTCAGGAAGGAAATTTTGTTTATAAGTTATTTAGCCTGCAAGACCTG 2220
Query 271 TTGTTACTCGTACGCTGCAGTGTCCAGAGGATAGAGACAAGACCACGTTCTAAAAAACGGAAGAAAATCAGAAG 344
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2221 TTGTTACTCGTACGCTGCAGTGTCCAGAGGATAGAGACAAGACCACGTTCTAAAAAACGGAAGAAAATCAGAAG 2294
Query 345 ACAATTTCCAGTTTATGTACTACCAAAAGTAGAGTATCAAGCTTGTTACGGAGTTGAAGCTCTGACTGAAAGTG 418
||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||
Sbjct 2295 ACAATTTCCAGTTTATGTACTACCAAAAGTAGAGTATCAAGCTTGTTATGGAGTTGAAGCTCTGACTGAAAGTG 2368
Query 419 AACTTTGTCGCTTATGGACTGAAAGTTTATTGCATTCCAACAGCTCATTTTATGTTGGGCATATCGATGCATTT 492
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2369 AACTTTGTCGCTTATGGACTGAAAGTTTATTGCATTCCAACAGCTCATTTTATGTTGGGCATATCGATGCATTT 2442
Query 493 ACTTCAAAACTTTTTCTACTGGAAGAAATTACCTCAGAAGAATTAAAAGAAAAGCTTTCAGCACTCAAGATTTC 566
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2443 ACTTCAAAACTTTTTCTACTGGAAGAAATTACCTCAGAAGAATTAAAAGAAAAGCTTTCAGCACTCAAGATTTC 2516
Query 567 CAATTTATTTAACATCCTCCAACACATTCTAAAGAAACTAAGTAGCTTGCAGGAGGGTTCCTACTTGTTATCTC 640
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2517 CAATTTATTTAACATCCTCCAACACATTCTAAAGAAACTAAGTAGCTTGCAGGAGGGTTCCTACTTGTTATCTC 2590
Query 641 ATGCAGCAGAAGATTCTTCACTCCTGATTTATAAGGCCTCTGATGGAAAAGTTACTAGGACAGCATACAATTTG 714
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2591 ATGCAGCAGAAGATTCTTCACTCCTGATTTATAAGGCCTCTGATGGAAAAGTTACTAGGACAGCATACAATTTG 2664
Query 715 TATAAAACACATTGCGGCCTTCCTGGTGTACCTTCCAGTCTCTCAGTTCCCTGGGTCCCATTAGATCCCAGCCT 788
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2665 TATAAAACACATTGCGGCCTTCCTGGTGTACCTTCCAGTCTCTCAGTTCCCTGGGTCCCATTAGATCCCAGCCT 2738
Query 789 GTTATTACCATATCATATCCATCATGGAAGAATACCTTGTACTTTTCCACCGAAATCACTGGATACCACAACAC 862
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2739 GTTATTACCATATCATATCCATCATGGAAGAATACCTTGTACTTTTCCACCGAAATCACTGGATACCACAACAC 2812
Query 863 AACAAAAGATTGGTGGAACGAGAATGCCTACACGCAGCCACAGGAATCCAGTTTCCATGGAAACCAAAAGCAGT 936
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2813 AACAAAAGATTGGTGGAACGAGAATGCCTACACGCAGCCACAGGAATCCAGTTTCCATGGAAACCAAAAGCAGT 2886
Query 937 TGCTTGCCTGCTCAGCAAGTTGAAACTGAAGGAGTGGCTCCACATAAAAGAAAAATAACT 996
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2887 TGCTTGCCTGCTCAGCAAGTTGAAACTGAAGGAGTGGCTCCACATAAAAGAAAAATAACT 2946
