Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_12587
- Subject:
- XR_931902.3
- Aligned Length:
- 3854
- Identities:
- 995
- Gaps:
- 2858
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GAGTCGGCGCGGCCACATCCTTTAAATATGGTCTTTTTTGGGCGCGCGCGACAATGTGAGGAGTGGGGTGGAGC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GTGTGTGGTGTGTGGCTGCGGCCTGGGCAAGAGCCGCCGCGGACCATGAGCTGAGTAAGTTCTGGAGGGATCCT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GCCTCTTGGAGCCTTCGCAGCCAGGCAGCTGTGAACTGTGAGCTAGAGTGAAGCAGAAATCTAGGAAGATGAGC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TCCAAGATGGTCATAAGTGAACCAGGACTGAATTGGGATATTTCCCCCAAAAATGGCCTTAAGACATTTTTCTC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TCGAGAAAATTATAAAGATCATTCCATGGCTCCAAGTTTAAAAGAACTACGTGTTTTATCCAACAGACGTATAG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GAGAAAATTTGAATGCCTCAGCAAGTTCTGTAGAAAATGAGCCGGCAGTTAGTTCAGCAACTCAAGCAAAGGAA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 AAAGTTAAAACCACAATTGGAATGGTTCTTCTTCCAAAACCAAGAGTTCCTTATCCTCGTTTCTCTCGTTTCTC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 ACAGAGAGAGCAGAGGAGTTATGTGGACTTGTTGGTTAAATACGCAAAGATTCCTGCAAATTCCAAAGCTGTTG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GAATAAATAAAAATGACTACTTGCAGTACTTGGATATGAAAAAACATGTGAACGAAGAAGTTACTGAGTTCCTA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 AAGTTTTTGCAGAATTCTGCAAAGAAATGTGCGCAGGATTATAATATGCTTTCTGATGATGCCCGTCTCTTCAC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 AGAGAAAATTTTAAGAGCTTGCATTGAACAAGTGAAAAAGTATTCAGAATTCTATACTCTCCACGAGGTCACCA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GCTTAATGGGATTCTTCCCATTCAGAGTAGAGATGGGATTAAAGTTAGAAAAAACTCTTCTCGCATTGGGCAGT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GTAAAATATGTGAAAACAGTATTTCCCTCAATGCCTATAAAGTTGCAGCTGTCAAAGGACGATATAGCTACCAT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TGAAACGTCAGAACAAACAGCTGAAGCTATGCATTATGATATTAGTAAAGATCCAAATGCAGAGAAGCTTGTTT 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CCAGATATCACCCTCAGATAGCTCTAACTAGTCAGTCATTATTTACCTTATTAAATAATCATGGACCAACGTAC 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 AAGGAACAGTGGGAAATTCCAGTGTGTATTCAAGTAATACCTGTTGCAGGTTCAAAACCAGTTAAAGTAATATA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 TATTAATTCACCACTTCCCCAAAAGAAAATGACTATGAGAGAGAGAAATCAAATCTTTCATGAAGTTCCATTAA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 AATTTATGATGTCCAAAAACACATCTGTTCCAGTCTCTGCAGTCTTTATGGACAAACCTGAAGAGTTTATATCT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 GAAATGGACATGTCCTGTGAAGTCAACGAGTGCCGAAAAATTGAGAGTCTTGAAAACTTGTATTTGGATTTTGA 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 TGATGATGTCACAGAACTTGAAACTTTTGGAGTAACCACCACCAAAGTATCAAAATCACCAAGTCCAGCAAGTA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 CTTCCACAGTACCTAACATGACAGATGCTCCTACAGCCCCCAAAGCAGGAACTACAACTGTGGCACCAAGTGCA 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 CCAGACATTTCTGCTAATTCTAGAAGTTTATCTCAGATTCTGATGGAACAATTGCAAAAGGAGAAACAGCTGGT 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 CACTGGTATGGATGGTGGCCCTGAGGAATGCAAAAATAAAGATGATCAGGGATTTGAATCATGTGAAAAGGTAT 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 CAAATTCTGACAAGCCTTTGATACAAGATAGTGACTTGAAAACATCTGATGCCTTACAGTTAGAAAATTCTCAG 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 GAAATTGAAACTTCTAATAAAAATGATATGACTATAGATATATTACATGCTGATGGTGAAAGACCTAATGTTCT 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 AGAAAACCTAGACAACTCAAAGGAAAAGACTGTTGGATCAGAAGCAGCAAAAACTGAAGATACAGTTCTCTGCA 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 GCAGTGATACAGATGAGGAGTGTTTAATCATTGATACAGAATGTAAAAATAATAGTGATGGAAAGACAGCTGTT 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 GTGGGTTCTAACTTAAGTTCCAGACCAGCTAGTCCAAATTCTTCCTCAGGACAGGCTTCTGTAGGAAACCAGAC 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 TAATACTGCTTGTAGTCCTGAAGAGTCATGTGTTTTAAAAAAACCTATCAAACGAGTATATAAAAAATTTGATC 2146
Query 1 --------------------ATGCAGGATGAGCTCTTAAAGCCAATTTCCAGAAAAGTACCAGAATTGCCCTTA 54
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2147 CAGTTGGAGAGATTTTAAAAATGCAGGATGAGCTCTTAAAGCCAATTTCCAGAAAAGTACCAGAATTGCCCTTA 2220
Query 55 ATGAATTTAGAAAATTCTAAACAGCCTTCTGTTTCTGAGCAATTGTCTGGTCCTTCAGACTCCTCTAGTTGGCC 128
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2221 ATGAATTTAGAAAATTCTAAACAGCCTTCTGTTTCTGAGCAATTGTCTGGTCCTTCAGACTCCTCTAGTTGGCC 2294
Query 129 GAAATCTGGATGGCCTTCTGCATTTCAGAAGCCAAAAGGACGATTGCCATATGAACTTCAGGACTATGTTGAAG 202
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2295 GAAATCTGGATGGCCTTCTGCATTTCAGAAGCCAAAAGGACGATTGCCATATGAACTTCAGGACTATGTTGAAG 2368
Query 203 ATACATCGGAATACCTAGCTCCTCAGGAAGGAAATTTTGTTTATAAGTTATTTAGCCTGCAAGACCTGTTGTTA 276
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2369 ATACATCGGAATACCTAGCTCCTCAGGAAGGAAATTTTGTTTATAAGTTATTTAGCCTGCAAGACCTGTTGTTA 2442
Query 277 CTCGTACGCTGCAGTGTCCAGAGGATAGAGACAAGACCACGTTCTAAAAAACGGAAGAAAATCAGAAGACAATT 350
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2443 CTCGTACGCTGCAGTGTCCAGAGGATAGAGACAAGACCACGTTCTAAAAAACGGAAGAAAATCAGAAGACAATT 2516
Query 351 TCCAGTTTATGTACTACCAAAAGTAGAGTATCAAGCTTGTTACGGAGTTGAAGCTCTGACTGAAAGTGAACTTT 424
||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||
Sbjct 2517 TCCAGTTTATGTACTACCAAAAGTAGAGTATCAAGCTTGTTATGGAGTTGAAGCTCTGACTGAAAGTGAACTTT 2590
Query 425 GTCGCTTATGGACTGAAAGTTTATTGCATTCCAACAGCTCATTTTATGTTGGGCATATCGATGCATTTACTTCA 498
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2591 GTCGCTTATGGACTGAAAGTTTATTGCATTCCAACAGCTCATTTTATGTTGGGCATATCGATGCATTTACTTCA 2664
Query 499 AAACTTTTTCTACTGGAAGAAATTACCTCAGAAGAATTAAAAGAAAAGCTTTCAGCACTCAAGATTTCCAATTT 572
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2665 AAACTTTTTCTACTGGAAGAAATTACCTCAGAAGAATTAAAAGAAAAGCTTTCAGCACTCAAGATTTCCAATTT 2738
Query 573 ATTTAACATCCTCCAACACATTCTAAAGAAACTAAGTA------------------------------------ 610
||||||||||||||||||||||||||||||||||||||
Sbjct 2739 ATTTAACATCCTCCAACACATTCTAAAGAAACTAAGTAGGGCATGTCACTTGGATCTCTGCGTCGCATCACATT 2812
Query 611 -----------------GCTTGCAGGAGGGTTCCTACTTGTTATCTCATGCAGCAGAAGATTCTTCACTCCTGA 667
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2813 GCCTTCTCTCCTTTTGTGCTTGCAGGAGGGTTCCTACTTGTTATCTCATGCAGCAGAAGATTCTTCACTCCTGA 2886
Query 668 TTTATAAGGCCTCTGATGGAAAAGTTACTAGGACAGCATACAATTTGTATAAAACACATTGCGGCCTTCCTGGT 741
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2887 TTTATAAGGCCTCTGATGGAAAAGTTACTAGGACAGCATACAATTTGTATAAAACACATTGCGGCCTTCCTGGT 2960
Query 742 GTACCTTCCAGTCTCTCAGTTCCCTGGGTCCCATTAGATCCCAGCCTGTTATTACCATATCATATCCATCATGG 815
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2961 GTACCTTCCAGTCTCTCAGTTCCCTGGGTCCCATTAGATCCCAGCCTGTTATTACCATATCATATCCATCATGG 3034
Query 816 AAGAATACCTTGTACTTTTCCACCGAAATCACTGGATACCACAACACAACAAAAGATTGGTGGAACGAGAATGC 889
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3035 AAGAATACCTTGTACTTTTCCACCGAAATCACTGGATACCACAACACAACAAAAGATTGGTGGAACGAGAATGC 3108
Query 890 CTACACGCAGCCACAGGAATCCAGTTTCCATGGAAACCAAAAGCAGTTGCTTGCCTGCTCAGCAAGTTGAAACT 963
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3109 CTACACGCAGCCACAGGAATCCAGTTTCCATGGAAACCAAAAGCAGTTGCTTGCCTGCTCAGCAAGTTGAAACT 3182
Query 964 GAAGGAGTGGCTCCACATAAAAGAAAAATAACT----------------------------------------- 996
|||||||||||||||||||||||||||||||||
Sbjct 3183 GAAGGAGTGGCTCCACATAAAAGAAAAATAACTTGAGGACTGTACCATGGAAAACTAAATTTAAAAAAACAGTT 3256
Query 997 -------------------------------------------------------------------------- 996
Sbjct 3257 ATAACAGTGTTTAATTTAGATAAGTTTGAGGGAAAATAATCAGTAGGCAAGAGGAACATTTTTCCTGTAGTAGC 3330
Query 997 -------------------------------------------------------------------------- 996
Sbjct 3331 TAGAGTGCCTTGAAAAAATGTGTTGGCTATGTGAAGGAATATTTCAACTAAAATGGAATGGTATGCTTTTCACC 3404
Query 997 -------------------------------------------------------------------------- 996
Sbjct 3405 CTTGAAGTTTGAGGAGGATCTTGATATGTTTTAACATTATCATGGCAGGGAAATATATAAAGAAGAAAAATATT 3478
Query 997 -------------------------------------------------------------------------- 996
Sbjct 3479 TTTACATTAAACCTTTTCTAAAAATTGTAAATAGAAAAATAATTTGGTTTTTTATCAAGAACAACACTTATCGT 3552
Query 997 -------------------------------------------------------------------------- 996
Sbjct 3553 TATGTATTGTGTTAGTTATATTGCCAGTCTGTTGCGACTGACTCAAAAAGTTAAATGTTGCCACTGCTGAAGAT 3626
Query 997 -------------------------------------------------------------------------- 996
Sbjct 3627 GATTATGAGCATCGCAAACTTTGTTTCTGACCCATTTTGACAGTTTTTATATACTCCTTTAAAATGATGAATGT 3700
Query 997 -------------------------------------------------------------------------- 996
Sbjct 3701 TACAGGTTAATAAAGTTAATACCTTTAAAAACTTGGTGAAATTCCATTACAGAAGCCAAAAATAAAAACTCCCT 3774
Query 997 -------------------------------------------------------------------------- 996
Sbjct 3775 GCCTCTGAAAAGTCAGATTACTGACTTCTTGTTTGGCAACCATCAGTTTGTTTAATAAAAGAAAAAATTTGGTG 3848
Query 997 ------ 996
Sbjct 3849 GTATAA 3854
