Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_12631
- Subject:
- XM_005253139.5
- Aligned Length:
- 2592
- Identities:
- 745
- Gaps:
- 1845
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGTTCCCAGCTTTGGAAACGCACCTAAAGCAGACTATTCCTGATCCTTATGAAGACTTTATGTACCGTCACCT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CCAATATTATGGCTACTTTAAAGCTCAGAGAGGCAGTTTACCAAACTCTGCTACGCATCAGCATGTTCGGAAGA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 ATAACCCTCAATGCCTGTTGAATGGCTCTCTTGGGGAAAAAGATGATTTGATACCAGACACCCTGCAAAAGGAG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AAGCTTCTATGGCCTATCAGTTTATCTTCAGCTGTGCACAGACAGATAGAAGCCATCAACAGAGATTCACATAT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GCTGAGTTTACCACATCTTAGGAGCAGACAGCTTCTTTATGATGAGTTGGATGAAGTAAACCCACGTCTTCGAG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 AACCCCAAGAGCTCTTTTCCATTTTGTCTACCAAGAGGCCACTGCAGGCTCCAAGATGGCCAATTGAATGTGAG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GTCATCAAGGAAAACATCCATCATATTGAGTGGGCTCCACCTCAACCAGAATATTTCTATCAGCCTAAAGGAAA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TGAAAAGGTACCAGAGATTGTAGGAGAGAAAAAAGGAACAGTTGTCTATCAATTAGATTCAGTGCCTATAGAAG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GTTCCTATTTTACCAGTTCCAGAGTGGGAGGCAAACGAGGAATTGTCAAGGAACTTGCTGTCACGTTGCAAGGA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CCAGAAGATAATACTCTACTGTTTGAATCAAGGTTTGAGAGTGGGAATCTGCAAAAAGCTGTCAGAGTAGACAC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CTATGAGTATGAACTCACCTTGCGAACTGACCTCTACACTAACAAACACACTCAGTGGTTTTATTTTCGTGTTC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 AGAACACCAGAAAAGATGCTACCTATCGCTTCACCATTGTCAACTTGCTAAAACCCAAGAGTCTTTATACTGTA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GGGATGAAGCCACTCTTGTACTCCCAATTGGATGCCAACACCCGCAATATTGGCTGGAGGAGAGAAGGAAATGA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 AATCAAGTACTACAAGAACAACACGGATGATGGGCAGCAGCCCTTCTACTGTCTCACGTGGACCATTCAGTTTC 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CATATGACCAGGACACTTGCTTCTTTGCACACTTCTACCCATATACATACACTGATTTGCAATGCTACCTCCTG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 TCAGTGGCAAACAACCCTATCCAGTCTCAGTTCTGCAAGCTCCAAACTTTATGCAGGAGCCTAGCAGGAAATAC 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 CGTTTACTTGCTCACCATCACCAACCCATCCCAGACCCCTCAAGAGGCAGCTGCAAAGAAAGCTGTGGTCTTGA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 GTGCCAGAGTTCACCCTGGAGAAAGTAATGGCTCCTGGGTTATGAAAGGCTTTTTGGACTTCATCCTTAGCAAC 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 TCCCCAGATGCCCAGCTCCTCAGAGATATTTTTGTCTTCAAGGTGCTTCCCATGTTAAATCCAGATGGTGTGAT 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 TGTGGGGAATTATCGGTGTTCCTTGGCCGGAAGGGATTTGAACAGGCATTATAAAACCATTCTGAAGGAGTCTT 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 TCCCTTGTATTTGGTACACCAGGAACATGATCAAAAGACTTCTTGAAGAAAGAGAGGTTCTGTTGTATTGTGAT 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 TTCCATGGCCACAGTCGTAAGAATAATATCTTCCTGTATGGCTGTAATAACAACAATCGCAAATACTGGCTTCA 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 TGAACGAGTCTTTCCTTTAATGTTATGCAAAAATGCACCAGATAAGTTCTCTTTTCACAGTTGTAATTTTAAGG 1702
Query 1 -----------------------------------ATGTGGCGGATGGGAATCCTAAACAGCTACACCATGGAG 39
|||||||||||||||||||||||||||||||||||||||
Sbjct 1703 TCCAAAAATGCAAAGAAGGAACAGGACGAGTTGTTATGTGGCGGATGGGAATCCTAAACAGCTACACCATGGAG 1776
Query 40 TCTACCTTTGGCGGGTCCACCCTGGGTAATAAAAGAGACACCCACTTTACCATCGAAGATCTGAAGTCCTTAGG 113
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777 TCTACCTTTGGCGGGTCCACCCTGGGTAATAAAAGAGACACCCACTTTACCATCGAAGATCTGAAGTCCTTAGG 1850
Query 114 TTATCATGTCTGTGACACCCTTCTGGACTTTTGTGATCCTGACCAAATTAAGTTCACTCAGTGTCTAGCAGAGC 187
||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||
Sbjct 1851 TTATCATGTCTGTGACACCCTTCTGGACTTTTGTGATCCTGACCAAATGAAGTTCACTCAGTGTCTAGCAGAGC 1924
Query 188 TTAAGGAGCTTCTACGACAGGAAATCCACAAGAAATTCCATGAACTTGGACAAGATGTAGATTTAGAAGGAAGT 261
|||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1925 TTAAGGAGCTTTTACGACAGGAAATCCACAAGAAATTCCATGAACTTGGACAAGATGTAGATTTAGAAGGAAGT 1998
Query 262 TGGAGTGACATCTCTTTGTCTGACATTGAATCCAGCACCAGTGGCTCTGACAGTTCTCTCTCAGATGGTCTTCC 335
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1999 TGGAGTGACATCTCTTTGTCTGACATTGAATCCAGCACCAGTGGCTCTGACAGTTCTCTCTCAGATGGTCTTCC 2072
Query 336 TGTTCACCTAGCAAACATAGCAGATGAGCTGACTCAGAAAAAGAAGATGTTTAAGAAGAAAAAAAAGAAGTCAC 409
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2073 TGTTCACCTAGCAAACATAGCAGATGAGCTGACTCAGAAAAAGAAGATGTTTAAGAAGAAAAAAAAGAAGTCAC 2146
Query 410 TTCAGACTAGGAAACAGCGAAATGAGCAGTATCAGAAAAAAAATTTGATGCAGAAGTTAAAGTTAACAGAAGAT 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2147 TTCAGACTAGGAAACAGCGAAATGAGCAGTATCAGAAAAAAAATTTGATGCAGAAGTTAAAGTTAACAGAAGAT 2220
Query 484 ACCTCAGAAAAGGCAGGATTTGCTTCTACTCTGCAAAAGCAGCCAACCTTTTTCAAAAACTCAGAGAATTCCAG 557
||||||
Sbjct 2221 ACCTCA-------------------------------------------------------------------- 2226
Query 558 TTTTTTACCAATGAAAAATGAAAACCCAAGGTTAAATGAGACAAATTTAAATAGAAGAGACAAAGACACCCCCC 631
||||||||||||||||||||||||||||||||||
Sbjct 2227 ----------------------------------------ACAAATTTAAATAGAAGAGACAAAGACACCCCCC 2260
Query 632 TGGACCCATCAATGGCCACCCTGATTCTGCCTAAGAATAAAGGGAGAATGCAGAATAAGAAGCCAGGCTTTACA 705
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2261 TGGACCCATCAATGGCCACCCTGATTCTGCCTAAGAATAAAGGGAGAATGCAGAATAAGAAGCCAGGCTTTACA 2334
Query 706 GTATCATGCTCTCCAAAGAGAACCATAAACTCCAGCCAAGAGCCAGCTCCAGGTATGAAGCCAAACTGGCCTAG 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2335 GTATCATGCTCTCCAAAGAGAACCATAAACTCCAGCCAAGAGCCAGCTCCAGGTATGAAGCCAAACTGGCCTAG 2408
Query 780 GAGCAGATATCCTGCCACAAAGAGAGGCTGTGCTGCCATGGCGGCATACCCATCCTTGCACATATACACATACC 853
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2409 GAGCAGATATCCTGCCACAAAGAGAGGCTGTGCTGCCATGGCGGCATACCCATCCTTGCACATATACACATACC 2482
Query 854 CG 855
||
Sbjct 2483 CG 2484
