Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_12631
- Subject:
- XM_011520376.3
- Aligned Length:
- 2298
- Identities:
- 853
- Gaps:
- 1443
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGCTGAGTTTACCACATCTTAGGAGCAGACAGCTTCTTTATGATGAGTTGGATGAAGTAAACCCACGTCTTCG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AGAACCCCAAGAGCTCTTTTCCATTTTGTCTACCAAGAGGCCACTGCAGGCTCCAAGATGGCCAATTGAATGTG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AGGTCATCAAGGAAAACATCCATCATATTGAGTGGGCTCCACCTCAACCAGAATATTTCTATCAGCCTAAAGGA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AATGAAAAGGTACCAGAGATTGTAGGAGAGAAAAAAGGAACAGTTGTCTATCAATTAGATTCAGTGCCTATAGA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 AGGTTCCTATTTTACCAGTTCCAGAGTGGGAGGCAAACGAGGAATTGTCAAGGAACTTGCTGTCACGTTGCAAG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GACCAGAAGATAATACTCTACTGTTTGAATCAAGGTTTGAGAGTGGGAATCTGCAAAAAGCTGTCAGAGTAGAC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 ACCTATGAGTATGAACTCACCTTGCGAACTGACCTCTACACTAACAAACACACTCAGTGGTTTTATTTTCGTGT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TCAGAACACCAGAAAAGATGCTACCTATCGCTTCACCATTGTCAACTTGCTAAAACCCAAGAGTCTTTATACTG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TAGGGATGAAGCCACTCTTGTACTCCCAATTGGATGCCAACACCCGCAATATTGGCTGGAGGAGAGAAGGAAAT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GAAATCAAGTACTACAAGAACAACACGGATGATGGGCAGCAGCCCTTCTACTGTCTCACGTGGACCATTCAGTT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TCCATATGACCAGGACACTTGCTTCTTTGCACACTTCTACCCATATACATACACTGATTTGCAATGCTACCTCC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 TGTCAGTGGCAAACAACCCTATCCAGTCTCAGTTCTGCAAGCTCCAAACTTTATGCAGGAGCCTAGCAGGAAAT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 ACCGTTTACTTGCTCACCATCACCAACCCATCCCAGACCCCTCAAGAGGCAGCTGCAAAGAAAGCTGTGGTCTT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GAGTGCCAGAGTTCACCCTGGAGAAAGTAATGGCTCCTGGGTTATGAAAGGCTTTTTGGACTTCATCCTTAGCA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 ACTCCCCAGATGCCCAGCTCCTCAGAGATATTTTTGTCTTCAAGGTGCTTCCCATGTTAAATCCAGATGGTGTG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 ATTGTGGGGAATTATCGGTGTTCCTTGGCCGGAAGGGATTTGAACAGGCATTATAAAACCATTCTGAAGGAGTC 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 TTTCCCTTGTATTTGGTACACCAGGAACATGATCAAAAGACTTCTTGAAGAAAGAGAGGTTCTGTTGTATTGTG 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 ATTTCCATGGCCACAGTCGTAAGAATAATATCTTCCTGTATGGCTGTAATAACAACAATCGCAAATACTGGCTT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 CATGAACGAGTCTTTCCTTTAATGTTATGCAAAAATGCACCAGATAAGTTCTCTTTTCACAGTTGTAATTTTAA 1406
Query 1 -------------------------------------ATGTGGCGGATGGGAATCCTAAACAGCTACACCATGG 37
|||||||||||||||||||||||||||||||||||||
Sbjct 1407 GGTCCAAAAATGCAAAGAAGGAACAGGACGAGTTGTTATGTGGCGGATGGGAATCCTAAACAGCTACACCATGG 1480
Query 38 AGTCTACCTTTGGCGGGTCCACCCTGGGTAATAAAAGAGACACCCACTTTACCATCGAAGATCTGAAGTCCTTA 111
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481 AGTCTACCTTTGGCGGGTCCACCCTGGGTAATAAAAGAGACACCCACTTTACCATCGAAGATCTGAAGTCCTTA 1554
Query 112 GGTTATCATGTCTGTGACACCCTTCTGGACTTTTGTGATCCTGACCAAATTAAGTTCACTCAGTGTCTAGCAGA 185
||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||
Sbjct 1555 GGTTATCATGTCTGTGACACCCTTCTGGACTTTTGTGATCCTGACCAAATGAAGTTCACTCAGTGTCTAGCAGA 1628
Query 186 GCTTAAGGAGCTTCTACGACAGGAAATCCACAAGAAATTCCATGAACTTGGACAAGATGTAGATTTAGAAGGAA 259
|||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629 GCTTAAGGAGCTTTTACGACAGGAAATCCACAAGAAATTCCATGAACTTGGACAAGATGTAGATTTAGAAGGAA 1702
Query 260 GTTGGAGTGACATCTCTTTGTCTGACATTGAATCCAGCACCAGTGGCTCTGACAGTTCTCTCTCAGATGGTCTT 333
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703 GTTGGAGTGACATCTCTTTGTCTGACATTGAATCCAGCACCAGTGGCTCTGACAGTTCTCTCTCAGATGGTCTT 1776
Query 334 CCTGTTCACCTAGCAAACATAGCAGATGAGCTGACTCAGAAAAAGAAGATGTTTAAGAAGAAAAAAAAGAAGTC 407
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777 CCTGTTCACCTAGCAAACATAGCAGATGAGCTGACTCAGAAAAAGAAGATGTTTAAGAAGAAAAAAAAGAAGTC 1850
Query 408 ACTTCAGACTAGGAAACAGCGAAATGAGCAGTATCAGAAAAAAAATTTGATGCAGAAGTTAAAGTTAACAGAAG 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851 ACTTCAGACTAGGAAACAGCGAAATGAGCAGTATCAGAAAAAAAATTTGATGCAGAAGTTAAAGTTAACAGAAG 1924
Query 482 ATACCTCAGAAAAGGCAGGATTTGCTTCTACTCTGCAAAAGCAGCCAACCTTTTTCAAAAACTCAGAGAATTCC 555
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1925 ATACCTCAGAAAAGGCAGGATTTGCTTCTACTCTGCAAAAGCAGCCAACCTTTTTCAAAAACTCAGAGAATTCC 1998
Query 556 AGTTTTTTACCAATGAAAAATGAAAACCCAAGGTTAAATGAGACAAATTTAAATAGAAGAGACAAAGACACCCC 629
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1999 AGTTTTTTACCAATGAAAAATGAAAACCCAAGGTTAAATGAGACAAATTTAAATAGAAGAGACAAAGACACCCC 2072
Query 630 CCTGGACCCATCAATGGCCACCCTGATTCTGCCTAAGAATAAAGGGAGAATGCAGAATAAGAAGCCAGGCTTTA 703
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2073 CCTGGACCCATCAATGGCCACCCTGATTCTGCCTAAGAATAAAGGGAGAATGCAGAATAAGAAGCCAGGCTTTA 2146
Query 704 CAGTATCATGCTCTCCAAAGAGAACCATAAACTCCAGCCAAGAGCCAGCTCCAGGTATGAAGCCAAACTGGCCT 777
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2147 CAGTATCATGCTCTCCAAAGAGAACCATAAACTCCAGCCAAGAGCCAGCTCCAGGTATGAAGCCAAACTGGCCT 2220
Query 778 AGGAGCAGATATCCTGCCACAAAGAGAGGCTGTGCTGCCATGGCGGCATACCCATCCTTGCACATATACACATA 851
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2221 AGGAGCAGATATCCTGCCACAAAGAGAGGCTGTGCTGCCATGGCGGCATACCCATCCTTGCACATATACACATA 2294
Query 852 CCCG 855
||||
Sbjct 2295 CCCG 2298
