Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_12695
Subject:
XM_017028080.2
Aligned Length:
2559
Identities:
1179
Gaps:
1362

Alignment

Query    1  ATGGGCTGGAGGCCCCGGAGAGCTCGGGGGACCCCGTTGCTGCTGCTGCTACTACTGCTGCTGCTCTGGCCAGT  74
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGGGCTGGAGGCCCCGGAGAGCTCGGGGGACCCCGTTGCTGCTGCTGCTACTACTGCTGCTGCTCTGGCCAGT  74

Query   75  GCCAGGCGCCGGGGTGCTTCAAGGACATATCCCTGGGCAGCCAGTCACCCCGCACTGGGTCCTGGATGGACAAC  148
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  GCCAGGCGCCGGGGTGCTTCAAGGACATATCCCTGGGCAGCCAGTCACCCCGCACTGGGTCCTGGATGGACAAC  148

Query  149  CCTGGCGCACCGTCAGCCTGGAGGAGCCGGTCTCGAAGCCAGACATGGGGCTGGTGGCCCTGGAGGCTGAAGGC  222
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  CCTGGCGCACCGTCAGCCTGGAGGAGCCGGTCTCGAAGCCAGACATGGGGCTGGTGGCCCTGGAGGCTGAAGGC  222

Query  223  CAGGAGCTCCTGCTTGAGCTGGAGAAGAACCACAGGCTGCTGGCCCCAGGATACATAGAAACCCACTACGGCCC  296
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  CAGGAGCTCCTGCTTGAGCTGGAGAAGAACCACAGGCTGCTGGCCCCAGGATACATAGAAACCCACTACGGCCC  296

Query  297  AGATGGGCAGCCAGTGGTGCTGGCCCCCAACCACAC--------------------------------------  332
            ||||||||||||||||||||||||||||||||||||                                      
Sbjct  297  AGATGGGCAGCCAGTGGTGCTGGCCCCCAACCACACGGTGAGATGCTTCCATGGGCTCTGGGATGCACCGCCAG  370

Query  333  -GGATCATTGCCACTACCAAGGGCGAGTAAGGGGCTTCCCCGACTCCTGGGTAGTCCTCTGCACCTGCTCTGGG  405
             |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  AGGATCATTGCCACTACCAAGGGCGAGTAAGGGGCTTCCCCGACTCCTGGGTAGTCCTCTGCACCTGCTCTGGG  444

Query  406  ATGAGTGGCCTGATCACCCTCAGCAGGAATGCCAGCTATTATCTGCGTCCCTGGCCACCCCGGGGCTCCAAGGA  479
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  ATGAGTGGCCTGATCACCCTCAGCAGGAATGCCAGCTATTATCTGCGTCCCTGGCCACCCCGGGGCTCCAAGGA  518

Query  480  CTTCTCAACCCACGAGATCTTTCGGATGGAGCAGCTGCTCACCTGGAAAGGAACCTGTGGCCACAGGGATCCTG  553
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  CTTCTCAACCCACGAGATCTTTCGGATGGAGCAGCTGCTCACCTGGAAAGGAACCTGTGGCCACAGGGATCCTG  592

Query  554  GGAACAAAGCGGGCATGACCAGCCTTCCTGGTGGTCCCCAGAGCAGGGGCAGGCGAGAAGCGCGCAGGACCCGG  627
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  GGAACAAAGCGGGCATGACCAGCCTTCCTGGTGGTCCCCAGAGCAGGGGCAGGCGAGAAGCGCGCAGGACCCGG  666

Query  628  AAGTACCTGGAACTGTACATTGTGGCAGACCACACCCTGTTCTTGACTCGGCACCGAAACTTGAACCACACCAA  701
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  AAGTACCTGGAACTGTACATTGTGGCAGACCACACCCTGTTCTTGACTCGGCACCGAAACTTGAACCACACCAA  740

Query  702  ACAGCGTCTCCTGGAAGTCGCCAACTACGTGGACCAGCTTCTCAGGACTCTGGACATTCAGGTGGCGCTGACCG  775
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  ACAGCGTCTCCTGGAAGTCGCCAACTACGTGGACCAGCTTCTCAGGACTCTGGACATTCAGGTGGCGCTGACCG  814

Query  776  GCCTGGAGGTGTGGACCGAGCGGGACC-----------------------------------------------  802
            |||||||||||||||||||||||||||                                               
Sbjct  815  GCCTGGAGGTGTGGACCGAGCGGGACCGCAGCCGCGTCACGCAGGACGCCAACGCCACGCTCTGGGCCTTCCTG  888

Query  803  --------------------------------------------------------------------------  802
                                                                                      
Sbjct  889  CAGTGGCGCCGGGGGCTGTGGGCGCAGCGGCCCCACGACTCCGCGCAGCTGCTCACGTGGGTGCCTCTGACCCG  962

Query  803  --------------------------------------------------------------------------  802
                                                                                      
Sbjct  963  GACGCGGGTCCCGGGTGGGGCGGCCTCACCTCCCGGCCCCGCCTGGTCACGCCGCGCTCCGCCCCCAGGGGCCG  1036

Query  803  --------------------------------------------------------------------------  802
                                                                                      
Sbjct 1037  CGCCTTCCAGGGCGCCACAGTGGGCCTGGCGCCCGTCGAGGGCATGTGCCGCGCCGAGAGCTCGGGAGGCGACC  1110

Query  803  --------------------------------------------------------------------------  802
                                                                                      
Sbjct 1111  ACTCGGAGCTCCCCATCGGCGCCGCAGCCACCATGGCCCATGAGATCGGCCACAGCCTCGGCCTCAGCCACGAC  1184

Query  803  --------------------------------------------------------------------------  802
                                                                                      
Sbjct 1185  CCCGACGGCTGCTGCGTGGAGGCTGCGGCCGAGTCCGGAGGCTGCGTCATGGCTGCGGCCACCGGGCACCCGTT  1258

Query  803  --------------------GCAGCCGCCGCCAGCTGCGCGCCTTCTTCCGCAAGGGGGGCGGCGCTTGCCTCT  856
                                ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259  TCCGCGCGTGTTCAGCGCCTGCAGCCGCCGCCAGCTGCGCGCCTTCTTCCGCAAGGGGGGCGGCGCTTGCCTCT  1332

Query  857  CCAATGCCCCGGACCCCGGACTCCCGGTGCCGCCGGCGCTCTGCGGGAACGGCTTCGTGGAAGCGGGCGAGGAG  930
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333  CCAATGCCCCGGACCCCGGACTCCCGGTGCCGCCGGCGCTCTGCGGGAACGGCTTCGTGGAAGCGGGCGAGGAG  1406

Query  931  TGTGACTGCGGCCCTGGCCAGGAGTGCCGCGACCTCTGCTGCTTTGCTCACAACTGCTCGCTGCGCCCGGGGGC  1004
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407  TGTGACTGCGGCCCTGGCCAGGAGTGCCGCGACCTCTGCTGCTTTGCTCACAACTGCTCGCTGCGCCCGGGGGC  1480

Query 1005  CCAGTGCGCCCACGGGGACTGCTGCGTGCGCTGCCTGCTGAAGCCGGCTGGAGCGCTGTGCCGCCAGGCCATGG  1078
            |||||||||||||||||||||||||||||||||||||.|                                   
Sbjct 1481  CCAGTGCGCCCACGGGGACTGCTGCGTGCGCTGCCTGGT-----------------------------------  1519

Query 1079  GTGACTGTGACCTCCCTGAGTTTTGCACGGGCACCTCCTCCCACTGTCCCCCAGACGTTTACCTACTGGACGGC  1152
                                                          |||||    ||||               
Sbjct 1520  ----------------------------------------------TCCCC----CGTT---------------  1528

Query 1153  TCACCCTGTGCCAGGGGCAGTGGCTACTGCTGGGATGGCGCATGTCCCACGCTGGAGCAGCAGTGCCAGCAGCT  1226
                         |||           |||||||.|                                      
Sbjct 1529  -------------GGG-----------TGCTGGGCT--------------------------------------  1540

Query 1227  CTGGG--GGCCTGGCTCCCACCCAGCTCCCGAGGCCTGTTTCCAGGTGGTGAACTCTGCGGGAGATGCTCATGG  1298
             ||||  |||||||||||  ||||||| |||||.|               |..|||| |||        |||||
Sbjct 1541  -TGGGTAGGCCTGGCTCC--CCCAGCT-CCGAGCC---------------GCGCTCT-CGG--------CATGG  1586

Query 1299  AAACTGCGGCCAGGACAGCGAGGGCCACTTCCTGCCCTGTGCAGGGAGGGATGCC-CTGTGTGGGAAGCTGCAG  1371
            |                       ||.||..||||.| |||           ||| ||                
Sbjct 1587  A-----------------------CCTCTCACTGCAC-GTG-----------GCCTCT----------------  1609

Query 1372  TGCCAGGGTGGAAAGCCCAGCCTGCTCGCACCGCACATGGTGCCAGTGGACTCTACCGTTCACCTAGATGGC-C  1444
                           |.|.||||.| |.||||                      |||..||||||     || |
Sbjct 1610  ---------------CTCTGCCTTC-CCCACC----------------------ACCCGTCACCT-----GCGC  1640

Query 1445  AG--GAAGTGACTTGTCGGGGAGCCTTGGCACTCCCCAGTGCCCAGCTGGACCTGCTTGGC-CTGGGCCTGGTA  1515
            ||  ||||                                  ||.||||||        || |||.|||     
Sbjct 1641  AGCTGAAG----------------------------------CCGGCTGGA--------GCGCTGTGCC-----  1667

Query 1516  GAGCCAGGCACCCAGTGTGGACCTAGAATGGTGTGCCAGAGCAGGCGCTGCAGGAAGAATGCCTTCCAGGAGCT  1589
              ||||||   ||| ||.|                                                       
Sbjct 1668  --GCCAGG---CCA-TGGG-------------------------------------------------------  1680

Query 1590  TCAGCGCTGCCTGACTGCCTGCCACAGCCACGGGGTTTGCAATAGCAACCATAACTGCCACTGTGCTCCAGGCT  1663
                                                                                      
Sbjct 1681  --------------------------------------------------------------------------  1680

Query 1664  GGGCTCCACCCTTCTGTGACAAGCCAGGCTTTGGTGGCAGCATGGACAGTGGCCCTGTGCAGGCTGAAAACCAT  1737
                                                                                      
Sbjct 1681  --------------------------------------------------------------------------  1680

Query 1738  GACACCTTCCTGCTGGCCATGCTCCTCAGCGTCCTGCTGCCTCTGCTCCCAGGGGCCGGCCTGGCCTGGTGTTG  1811
                                                                                      
Sbjct 1681  --------------------------------------------------------------------------  1680

Query 1812  CTACCGACTCCCAGGAGCCCATCTGCAGCGATGCAGCTGGGGCTGCAGAAGGGACCCTGCGTGCAGTGGCCCCA  1885
                                                                                      
Sbjct 1681  --------------------------------------------------------------------------  1680

Query 1886  AAGATGGCCCACACAGGGACCACCCCCTGGGCGGCGTTCACCCCATGGAGTTGGGCCCCACAGCCACTGGACAG  1959
                                                                                      
Sbjct 1681  --------------------------------------------------------------------------  1680

Query 1960  CCCTGGCCCCTGGACCCTGAGAACTCTCATGAGCCCAGCAGCCACCCTGAGAAGCCTCTGCCAGCAGTCTCGCC  2033
                                                                                      
Sbjct 1681  --------------------------------------------------------------------------  1680

Query 2034  TGACCCCCAAGATCAAGTCCAGATGCCAAGATCCTGCCTCTGG  2076
                                                       
Sbjct 1681  -------------------------------------------  1680

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