Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_12695
- Subject:
- XM_017028083.1
- Aligned Length:
- 2146
- Identities:
- 1074
- Gaps:
- 1028
Alignment
Query 1 ATGGGCTGGAGGCCCCGGAGAGCTCGGGGGACCCCGTTGCTGCTGCTGCTACTACTGCTGCTGCTCTGGCCAGT 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGGGCTGGAGGCCCCGGAGAGCTCGGGGGACCCCGTTGCTGCTGCTGCTACTACTGCTGCTGCTCTGGCCAGT 74
Query 75 GCCAGGCGCCGGGGTGCTTCAAGGACATATCCCTGGGCAGCCAGTCACCCCGCACTGGGTCCTGGATGGACAAC 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 GCCAGGCGCCGGGGTGCTTCAAGGACATATCCCTGGGCAGCCAGTCACCCCGCACTGGGTCCTGGATGGACAAC 148
Query 149 CCTGGCGCACCGTCAGCCTGGAGGAGCCGGTCTCGAAGCCAGACATGGGGCTGGTGGCCCTGGAGGCTGAAGGC 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 CCTGGCGCACCGTCAGCCTGGAGGAGCCGGTCTCGAAGCCAGACATGGGGCTGGTGGCCCTGGAGGCTGAAGGC 222
Query 223 CAGGAGCTCCTGCTTGAGCTGGAGAAGAACCACAGGCTGCTGGCCCCAGGATACATAGAAACCCACTACGGCCC 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 CAGGAGCTCCTGCTTGAGCTGGAGAAGAACCACAGGCTGCTGGCCCCAGGATACATAGAAACCCACTACGGCCC 296
Query 297 AGATGGGCAGCCAGTGGTGCTGGCCCCCAACCACAC-------------------------------------- 332
||||||||||||||||||||||||||||||||||||
Sbjct 297 AGATGGGCAGCCAGTGGTGCTGGCCCCCAACCACACGGTGAGATGCTTCCATGGGCTCTGGGATGCACCGCCAG 370
Query 333 -GGATCATTGCCACTACCAAGGGCGAGTAAGGGGCTTCCCCGACTCCTGGGTAGTCCTCTGCACCTGCTCTGGG 405
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 AGGATCATTGCCACTACCAAGGGCGAGTAAGGGGCTTCCCCGACTCCTGGGTAGTCCTCTGCACCTGCTCTGGG 444
Query 406 ATGAGTGGCCTGATCACCCTCAGCAGGAATGCCAGCTATTATCTGCGTCCCTGGCCACCCCGGGGCTCCAAGGA 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 ATGAGTGGCCTGATCACCCTCAGCAGGAATGCCAGCTATTATCTGCGTCCCTGGCCACCCCGGGGCTCCAAGGA 518
Query 480 CTTCTCAACCCACGAGATCTTTCGGATGGAGCAGCTGCTCACCTGGAAAGGAACCTGTGGCCACAGGGATCCTG 553
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 CTTCTCAACCCACGAGATCTTTCGGATGGAGCAGCTGCTCACCTGGAAAGGAACCTGTGGCCACAGGGATCCTG 592
Query 554 GGAACAAAGCGGGCATGACCAGCCTTCCTGGTGGTCCCCAGAGCAGGGGCAGGCGAGAAGCGCGCAGGACCCGG 627
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 GGAACAAAGCGGGCATGACCAGCCTTCCTGGTGGTCCCCAGAGCAGGGGCAGGCGAGAAGCGCGCAGGACCCGG 666
Query 628 AAGTACCTGGAACTGTACATTGTGGCAGACCACACCCTGTTCTTGACTCGGCACCGAAACTTGAACCACACCAA 701
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 AAGTACCTGGAACTGTACATTGTGGCAGACCACACCCTGTTCTTGACTCGGCACCGAAACTTGAACCACACCAA 740
Query 702 ACAGCGTCTCCTGGAAGTCGCCAACTACGTGGACCAGCTTCTCAGGACTCTGGACATTCAGGTGGCGCTGACCG 775
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 ACAGCGTCTCCTGGAAGTCGCCAACTACGTGGACCAGCTTCTCAGGACTCTGGACATTCAGGTGGCGCTGACCG 814
Query 776 GCCTGGAGGTGTGGACCGAGCGGGACCGCAGCCGCCGCCAGCTGCGCGCCTTCTTCCGCAAGGGGGGCGGCGCT 849
|||||||||||||||||||||||||||||||||| ||.|| |||| ||.||
Sbjct 815 GCCTGGAGGTGTGGACCGAGCGGGACCGCAGCCG-CGTCA----------------CGCA----GGACG----- 862
Query 850 TGCCTCTCCAATGCCCCGGACCCCGGAC--TCCCGGTGCCGCCGGCGCTCTGCGGGAACGGCTTCGTGGAAGCG 921
||||.|||.|| |.|.||.| ||| |||.| .||||| |||| |||| |.|
Sbjct 863 -------CCAACGCCACG--CTCTGGGCCTTCC---TGCAG-TGGCGC----CGGG---GGCT--------GTG 908
Query 922 GGCGAGGAGTGTGACTGCGGCCCTGGCCAGGAGTGCCGCGACCTCTGCTGCTTTGCTCACAACTGCTC----GC 991
|||| |.|||||| |||.||.| ||||| ||.|||||| ||
Sbjct 909 GGCG----------CAGCGGCC----CCACGACT-CCGCG-------------------CAGCTGCTCACGGGC 948
Query 992 TGCGCCCGGGGGCCCAGTGCGCC-CACGGGGACTGCTGCGTGCGCTGCCTGCTGAAGCCGGCTGGAGCGC-TGT 1063
.||||| ..||||.||||| ||..|||.||| |||| ||| |.|||.|| |||
Sbjct 949 CGCGCC-----TTCCAGGGCGCCACAGTGGGCCTG------GCGC------------CCG--TCGAGGGCATGT 997
Query 1064 GCCGCCAGGCCATGGGTGACTGTGACCTC------CCTGAGTTTTGCACGGGCACCTCCTCCCACTGTCCCCCA 1131
||||| ||| |.||.||| |.||| |||||| |||
Sbjct 998 GCCGC---GCC----------GAGAGCTCGGGAGGCGTGA-----GCACGG--ACC------------------ 1033
Query 1132 GACGTTTACCTACT-GGACGGCTCACC--CTGTGCCAGGGGCAGTGGCTACTGCTGGGATGGCGCATG---TC- 1198
||| ||| ||||.|| |.|.||| ||| ||.|| .|||||.|||| ||
Sbjct 1034 -----------ACTCGGA--GCTCCCCATCGGCGCC----GCA---GCCAC------CATGGCCCATGAGATCG 1081
Query 1199 -CCACGCTGGAGCAGCAGTGCCAGCAGCTCTGGGGGCCTGGCTCCCACCCA-GCTCCCGAGGCCTGTTTCCAGG 1270
|||| ||| ||| ||||| ||.||| |..|||||.|.|||
Sbjct 1082 GCCAC-----AGC--------------CTC----GGCCT------CAGCCACGACCCCGACGGCTG-------- 1118
Query 1271 TGGTGAACTCTGCGGGAGATGCTCATGGAAACTGCGGCCAGGACAGCGAGGGCCACTTCCTGCCCTGTGCAGGG 1344
||||| ||||..||||||| |||| ||| ||
Sbjct 1119 ---------CTGCG-----------TGGAGGCTGCGGC--------CGAG-------TCC------------GG 1145
Query 1345 AGGGATGCCCTGTG---TGGGAAGCTGCAGTGCCA---GGGTGG--AAAGCCCAGCCTGCTCGCACCGCACATG 1410
||| |||.| || ||||| .|||| |||||| .|.| ||.||
Sbjct 1146 AGG------CTGCGTCATG----GCTGC--GGCCACCGGGGTGGTTTATG---AGGCT---------------- 1188
Query 1411 GTGCCAGTGGACTCTACCGTTCACCTAGATGGCCAGGAAGTGACTTGTCGGGGAGCCTTGGCACTCCCCAGTGC 1484
Sbjct 1189 -------------------------------------------------------------------------- 1188
Query 1485 CCAGCTGGACCTGCTTGGCCTGGGCCTGGTAGAGCCAGGCACCCAGTGTGGACCTAGAATGGTGTGCCAGAGCA 1558
Sbjct 1189 -------------------------------------------------------------------------- 1188
Query 1559 GGCGCTGCAGGAAGAATGCCTTCCAGGAGCTTCAGCGCTGCCTGACTGCCTGCCACAGCCACGGGGTTTGCAAT 1632
Sbjct 1189 -------------------------------------------------------------------------- 1188
Query 1633 AGCAACCATAACTGCCACTGTGCTCCAGGCTGGGCTCCACCCTTCTGTGACAAGCCAGGCTTTGGTGGCAGCAT 1706
Sbjct 1189 -------------------------------------------------------------------------- 1188
Query 1707 GGACAGTGGCCCTGTGCAGGCTGAAAACCATGACACCTTCCTGCTGGCCATGCTCCTCAGCGTCCTGCTGCCTC 1780
Sbjct 1189 -------------------------------------------------------------------------- 1188
Query 1781 TGCTCCCAGGGGCCGGCCTGGCCTGGTGTTGCTACCGACTCCCAGGAGCCCATCTGCAGCGATGCAGCTGGGGC 1854
Sbjct 1189 -------------------------------------------------------------------------- 1188
Query 1855 TGCAGAAGGGACCCTGCGTGCAGTGGCCCCAAAGATGGCCCACACAGGGACCACCCCCTGGGCGGCGTTCACCC 1928
Sbjct 1189 -------------------------------------------------------------------------- 1188
Query 1929 CATGGAGTTGGGCCCCACAGCCACTGGACAGCCCTGGCCCCTGGACCCTGAGAACTCTCATGAGCCCAGCAGCC 2002
Sbjct 1189 -------------------------------------------------------------------------- 1188
Query 2003 ACCCTGAGAAGCCTCTGCCAGCAGTCTCGCCTGACCCCCAAGATCAAGTCCAGATGCCAAGATCCTGCCTCTGG 2076
Sbjct 1189 -------------------------------------------------------------------------- 1188
