Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_12717
- Subject:
- XM_017009899.1
- Aligned Length:
- 3564
- Identities:
- 1731
- Gaps:
- 1833
Alignment
Query 1 ATGGGGCCACGAAAGAAAAGTGTGAAAACATGTATCATGAATAATGAAATTCCAGAAGAAATGACAGCAGATGA 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 AACAAAGGACTATATGAATCAACTTTCACATGAAGTACTTTGCCATATTTTTAGGTACCTCCCTCTGCAGGATA 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 TCATGTGTATGGAATGTCTTTCCCGGAAGCTAAAGGAAGCAGTGACCCTATATCTGCGAGTTGTGAGAGTTGTA 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 GATCTCTGTGCAGGGCGGTGGTGGGAATACATGCCAAGTGGCTTTACAGATGCCAGTTTTCTAACACTATTAAA 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 GAAGATGCCAGATGTTGAACAGCTATATGGCCTTCACCCTCGATACCTTGAGAGGCGAAGAGTAAGGGGCCATG 370
Sbjct 1 -------------------------------------------------------------------------- 0
Query 371 AGGCTTTTAGCATTCCAGGAGTCCTAGAAGCTTTGCAGGCATGCCCAAACTTAGTGGGTGTGGAAACTTCTCAT 444
Sbjct 1 -------------------------------------------------------------------------- 0
Query 445 TTGGAGTTGGTAGAATCCATTTGGACATATATGCCCCATGTTCATATTTTGGGGAAATTTCGTAATCGTAATGG 518
Sbjct 1 -------------------------------------------------------------------------- 0
Query 519 AGCTTTTCCAATTCCTCCTGAAAATAAACTGAAAATTCCTATAGGAGCCAAAATTCAAACTTTACATTTAGTTG 592
Sbjct 1 -------------------------------------------------------------------------- 0
Query 593 GGGTGAATGTTCCTGAAATTCCTTGTATCCCAATGCTAAGGCACCTTTATATGAAGTGGGTAAGACTCACTAAA 666
Sbjct 1 -------------------------------------------------------------------------- 0
Query 667 CCACAGCCATTTAAAGACTTCCTTTGTATCAGCTTAAGAACTTTCGTCATGAGGAACTGTGCAGGACCCACAAA 740
Sbjct 1 -------------------------------------------------------------------------- 0
Query 741 TTCCTTGAAATATGTCCCTTTAGTAACAGGCTTAGCCTCTGCCCGAAACTTGGAACACTTAGAAATGGTTCGAG 814
Sbjct 1 -------------------------------------------------------------------------- 0
Query 815 TTCCTTTCCTTGGAGGTCTTATCCAACATGTTGTTGAAGACAGTTGGAGATCAGGTGGTTTTAGAAATTTGCAC 888
Sbjct 1 -------------------------------------------------------------------------- 0
Query 889 ACTATTGTTCTGGGAGCTTGCAAAAATGCTCTTGAAGTAGATCTTGGTTACCTCATCATTACTGCTGCCCGTAG 962
Sbjct 1 -------------------------------------------------------------------------- 0
Query 963 GTTACATGAAGTTCGGATCCAGCCTTCCCTAACCAAAGATGGTGTCTTTTCTGCCCTAAAGATGGCAGAGTTGG 1036
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1037 AGTTTCCCCAGTTTGAAACCCTTCATCTAGGATATGTAGATGAGTTTTTGCTACAGAGCAGAATGGCTAATGCG 1110
||||||||||||
Sbjct 1 --------------------------------------------------------------ATGGCTAATGCG 12
Query 1111 GATCTGGTGAAGTATGGTTTGGCTGATGTGGTAGAAAATCCTGGTATCATCACTGATATAGGGATGAAAGCAGT 1184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 13 GATCTGGTGAAGTATGGTTTGGCTGATGTGGTAGAAAATCCTGGTATCATCACTGATATAGGGATGAAAGCAGT 86
Query 1185 CAATGAAGTTTTTTCCTGTATCAAATATCTGGCAATTTACAATTGCCCTCATCTACACAACCCATACAATTGGA 1258
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 87 CAATGAAGTTTTTTCCTGTATCAAATATCTGGCAATTTACAATTGCCCTCATCTACACAACCCATACAATTGGA 160
Query 1259 TCTCAGACCACTCAAGATGGACTCGATTGGTTGATATCAACCTAGTACGGTGCCATGCTTTGAAGCTGGACTCT 1332
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 161 TCTCAGACCACTCAAGATGGACTCGATTGGTTGATATCAACCTAGTACGGTGCCATGCTTTGAAGCTGGACTCT 234
Query 1333 TTTGGCCAGTTTATTGAATTATTACCCAGCCTAGAGTTTATTTCACTGGATCAGATGTTTCGTGAACCACCCAA 1406
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 235 TTTGGCCAGTTTATTGAATTATTACCCAGCCTAGAGTTTATTTCACTGGATCAGATGTTTCGTGAACCACCCAA 308
Query 1407 GGGTTGTGCTCGAGTTGGTCTGAGTGCAGGCACAGGAATTGGTGTTTCATCAGCTCTTGTTAGCAACCAGAACT 1480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 309 GGGTTGTGCTCGAGTTGGTCTGAGTGCAGGCACAGGAATTGGTGTTTCATCAGCTCTTGTTAGCAACCAGAACT 382
Query 1481 CCAACAATGACGATAATAATGCCCAGAATAACAATGCCAACATCCACGACAACAATCACCATCATCCAGATGAC 1554
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 383 CCAACAATGACGATAATAATGCCCAGAATAACAATGCCAACATCCACGACAACAATCACCATCATCCAGATGAC 456
Query 1555 TCAGACGAGGAGAATGACTTTCGGCAAGATCTGCAGCCAGGAGAGCAGCAGTTTGCAGCTGACGCATTAAATGA 1628
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 457 TCAGACGAGGAGAATGACTTTCGGCAAGATCTGCAGCCAGGAGAGCAGCAGTTTGCAGCTGACGCATTAAATGA 530
Query 1629 GATGGAAGACATCGTCCAAGAAGATGGAGAGGTGGTGGCCGAGAGTGGAAATAATACTCCAGCTCACAGCCAGG 1702
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 531 GATGGAAGACATCGTCCAAGAAGATGGAGAGGTGGTGGCCGAGAGTGGAAATAATACTCCAGCTCACAGCCAGG 604
Query 1703 CAATTATTCCTGTGGATGTTGATGAGGAACAAGCAGGACCCAGTGGTCTTCAGCGTGTAGTAAAACCAACCTCA 1776
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 605 CAATTATTCCTGTGGATGTTGATGAGGAACAAGCAGGACCCAGTGGTCTTCAGCGTGTAGTAAAACCAACCTCA 678
Query 1777 ATTACTGTTCATGATTCAGAGAGTGATGATGAAGAAGATAGTCTAGAACTCCAAGAAGTCTGGATTCCTAAGAA 1850
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 679 ATTACTGTTCATGATTCAGAGAGTGATGATGAAGAAGATAGTCTAGAACTCCAAGAAGTCTGGATTCCTAAGAA 752
Query 1851 CGGTACTCGGCGTTACTCTGAACGTGAAGAAAAAACTGGAGAGTCAGTGCAGTCCAGAGAATT----------- 1913
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 753 CGGTACTCGGCGTTACTCTGAACGTGAAGAAAAAACTGGAGAGTCAGTGCAGTCCAGAGAATTGTCAGTAAGTG 826
Query 1914 -------------------------------------------------------------------------- 1913
Sbjct 827 GAAAAGGCAAGACTCCACTTCGAAAGAGGTACAACTCCCATCAGATGGGCCAGTCGAAGCAGTTTCCCCTCGAG 900
Query 1914 -------------------------------------------------------------------------- 1913
Sbjct 901 GAAAGCAGCTGTGAGAAAGGCTGTCAGGTCACCAGTGAGCAGATCAAAGCCGATATGAAAGCAGCTAGGGATAT 974
Query 1914 -------------------------------------------------------------------------- 1913
Sbjct 975 TCCTGAAAAGAAAAAAAACAAGGATGTTTATCCCAGCTGCAGCAGCACCACCGCCAGCACAGTGGGAAACTCCA 1048
Query 1914 -------------------------------------------------------------------------- 1913
Sbjct 1049 GCTCACACAACACTGCTTCTCAAAGCCCCGACTTTGTAAGGACGGTGAACAGCGGCGGCTCTTCCGAGCCTAGC 1122
Query 1914 -------------------------------------------------------------------------- 1913
Sbjct 1123 CCTACAGAAGTGGATGTGTCCAGGCAGTGTGCCTGCTCCCCCGGTGGGTCAGAGGACTCTGAGGCCATGGAGGA 1196
Query 1914 -------------------------------------------------------------------------- 1913
Sbjct 1197 GGGAGATGCAGAGAGTTCTGTCTGCCCCAGATGCTGCTGTCACAGGCCCCAGGAATCCCAAAGGAGAACTAGCA 1270
Query 1914 -------------------------------------------------------------------------- 1913
Sbjct 1271 GGTGTTCTGATGAGGAACGTCCTTCAACCAGCCGAGCCTGTGTTGTGAATGGCCCGGATGGTACGAGATCCGCC 1344
Query 1914 -------------------------------------------------------------------------- 1913
Sbjct 1345 TTTTCCTTTAGGACTCTGCCACAAGGGGGGTCTTCAGGCCCAGCACATGATGAGAGGACTAATGGGAGTGGCTC 1418
Query 1914 -------------------------------------------------------------------------- 1913
Sbjct 1419 TGGGGCTACAGGTGAGGACAGGAGGGGGAGCTCCCAGCCTGAGAGTTGTGACGTGCAGTCTAATGAAGACTACC 1492
Query 1914 ----------------------------------------------------------GTCAGAAGTAGCCAAA 1929
||||||||||||||||
Sbjct 1493 CTCGGAGGCCCCTAACCAGGGCCAGGAGCAGACTGTCCCATGTACTGCTGGTATCTGAGTCAGAAGTAGCCAAA 1566
Query 1930 ACAAAGCCACGTCACGCCATGAAACGGAAGCGGACAGCAGATAAATCCACTAGTACAAGTGATCCTGTGATCGA 2003
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1567 ACAAAGCCACGTCACGCCATGAAACGGAAGCGGACAGCAGATAAATCCACTAGTACAAGTGATCCTGTGATCGA 1640
Query 2004 GGATGACCATGTGCAGGTTCTTGTATTAAAATCCAAGAATCTTGTTGGAGTCACTATGACCAATTGTGGAATCA 2077
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1641 GGATGACCATGTGCAGGTTCTTGTATTAAAATCCAAGAATCTTGTTGGAGTCACTATGACCAATTGTGGAATCA 1714
Query 2078 CAGATCTAGTGCTAAAAGACTGTCCAAAGATGATGTTCATCCATGCTACCAGGTGCAGGGTACTAAAACATTTA 2151
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1715 CAGATCTAGTGCTAAAAGACTGTCCAAAGATGATGTTCATCCATGCTACCAGGTGCAGGGTACTAAAACATTTA 1788
Query 2152 AAGGTAGAAAATGCACCAATTGTAAACCGATTTGACTATGCACAGTGCAAGAAACTGAACATGGATCAGGTACT 2225
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1789 AAGGTAGAAAATGCACCAATTGTAAACCGATTTGACTATGCACAGTGCAAGAAACTGAACATGGATCAGGTACT 1862
Query 2226 AGACCAGATACTAAGAATGCCACCCGAGAGAAACCGCATCATATACCTACGCCCAATGCAGCAGGTGGACACTC 2299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1863 AGACCAGATACTAAGAATGCCACCCGAGAGAAACCGCATCATATACCTACGCCCAATGCAGCAGGTGGACACTC 1936
Query 2300 TAACTTTGGAGCAGAAGCTATTTAGTGGTCCCTACCCCTATCACATCTGTATTATCCATGAATTCAGTAACCCT 2373
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1937 TAACTTTGGAGCAGAAGCTATTTAGTGGTCCCTACCCCTATCACATCTGTATTATCCATGAATTCAGTAACCCT 2010
Query 2374 CCCAATGTCCGGAATAAGGTGCGCATTCGCAGCTGGATGGACACTATAGCAAACATCAATCAAGAGCTCATTAA 2447
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2011 CCCAATGTCCGGAATAAGGTGCGCATTCGCAGCTGGATGGACACTATAGCAAACATCAATCAAGAGCTCATTAA 2084
Query 2448 ATATGAATTCTTCCCTGAAGCCACTCGAAGTGAAGAAGACTTAAAGAAATACCCCAAGTACCCCTGGGGGAGAG 2521
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2085 ATATGAATTCTTCCCTGAAGCCACTCGAAGTGAAGAAGACTTAAAGAAATACCCCAAGTACCCCTGGGGGAGAG 2158
Query 2522 AAATCTATACTTTAGAAGGTGTTGTGGATGGAGCTCCATATTCCATGATTTCTGACTTCCCTTGGCTGAGGTCA 2595
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2159 AAATCTATACTTTAGAAGGTGTTGTGGATGGAGCTCCATATTCCATGATTTCTGACTTCCCTTGGCTGAGGTCA 2232
Query 2596 TTACGAGCTGCAGAGCCCAACAGCTTCGCTCGATACGACTTTGAAGACGATGAAGAAAGCACTATCTATGCTCC 2669
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2233 TTACGAGCTGCAGAGCCCAACAGCTTCGCTCGATACGACTTTGAAGACGATGAAGAAAGCACTATCTATGCTCC 2306
Query 2670 TAGAAGGAAAGGACAGCTGTCTGCAGACATCTGTATGGAAACAATAGGAGAGGAAATTTCAGAGATGCGTCAGA 2743
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2307 TAGAAGGAAAGGACAGCTGTCTGCAGACATCTGTATGGAAACAATAGGAGAGGAAATTTCAGAGATGCGTCAGA 2380
Query 2744 TGAAGAAGGGTGTATTTCAGCGAGTAGTGGCAATTTTTATCCACTATTGTGATGTCAATGGAGAGCCAGTTGAA 2817
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2381 TGAAGAAGGGTGTATTTCAGCGAGTAGTGGCAATTTTTATCCACTATTGTGATGTCAATGGAGAGCCAGTTGAA 2454
Query 2818 GATGACTACATT 2829
||||||||||||
Sbjct 2455 GATGACTACATT 2466
