Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_12717
- Subject:
- XM_017009901.2
- Aligned Length:
- 3339
- Identities:
- 1731
- Gaps:
- 1608
Alignment
Query 1 ATGGGGCCACGAAAGAAAAGTGTGAAAACATGTATCATGAATAATGAAATTCCAGAAGAAATGACAGCAGATGA 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 AACAAAGGACTATATGAATCAACTTTCACATGAAGTACTTTGCCATATTTTTAGGTACCTCCCTCTGCAGGATA 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 TCATGTGTATGGAATGTCTTTCCCGGAAGCTAAAGGAAGCAGTGACCCTATATCTGCGAGTTGTGAGAGTTGTA 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 GATCTCTGTGCAGGGCGGTGGTGGGAATACATGCCAAGTGGCTTTACAGATGCCAGTTTTCTAACACTATTAAA 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 GAAGATGCCAGATGTTGAACAGCTATATGGCCTTCACCCTCGATACCTTGAGAGGCGAAGAGTAAGGGGCCATG 370
Sbjct 1 -------------------------------------------------------------------------- 0
Query 371 AGGCTTTTAGCATTCCAGGAGTCCTAGAAGCTTTGCAGGCATGCCCAAACTTAGTGGGTGTGGAAACTTCTCAT 444
Sbjct 1 -------------------------------------------------------------------------- 0
Query 445 TTGGAGTTGGTAGAATCCATTTGGACATATATGCCCCATGTTCATATTTTGGGGAAATTTCGTAATCGTAATGG 518
Sbjct 1 -------------------------------------------------------------------------- 0
Query 519 AGCTTTTCCAATTCCTCCTGAAAATAAACTGAAAATTCCTATAGGAGCCAAAATTCAAACTTTACATTTAGTTG 592
Sbjct 1 -------------------------------------------------------------------------- 0
Query 593 GGGTGAATGTTCCTGAAATTCCTTGTATCCCAATGCTAAGGCACCTTTATATGAAGTGGGTAAGACTCACTAAA 666
Sbjct 1 -------------------------------------------------------------------------- 0
Query 667 CCACAGCCATTTAAAGACTTCCTTTGTATCAGCTTAAGAACTTTCGTCATGAGGAACTGTGCAGGACCCACAAA 740
Sbjct 1 -------------------------------------------------------------------------- 0
Query 741 TTCCTTGAAATATGTCCCTTTAGTAACAGGCTTAGCCTCTGCCCGAAACTTGGAACACTTAGAAATGGTTCGAG 814
Sbjct 1 -------------------------------------------------------------------------- 0
Query 815 TTCCTTTCCTTGGAGGTCTTATCCAACATGTTGTTGAAGACAGTTGGAGATCAGGTGGTTTTAGAAATTTGCAC 888
Sbjct 1 -------------------------------------------------------------------------- 0
Query 889 ACTATTGTTCTGGGAGCTTGCAAAAATGCTCTTGAAGTAGATCTTGGTTACCTCATCATTACTGCTGCCCGTAG 962
Sbjct 1 -------------------------------------------------------------------------- 0
Query 963 GTTACATGAAGTTCGGATCCAGCCTTCCCTAACCAAAGATGGTGTCTTTTCTGCCCTAAAGATGGCAGAGTTGG 1036
Sbjct 1 -------------------------------------------------------------------------- 0
Query 1037 AGTTTCCCCAGTTTGAAACCCTTCATCTAGGATATGTAGATGAGTTTTTGCTACAGAGCAGAATGGCTAATGCG 1110
||||||||||||
Sbjct 1 --------------------------------------------------------------ATGGCTAATGCG 12
Query 1111 GATCTGGTGAAGTATGGTTTGGCTGATGTGGTAGAAAATCCTGGTATCATCACTGATATAGGGATGAAAGCAGT 1184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 13 GATCTGGTGAAGTATGGTTTGGCTGATGTGGTAGAAAATCCTGGTATCATCACTGATATAGGGATGAAAGCAGT 86
Query 1185 CAATGAAGTTTTTTCCTGTATCAAATATCTGGCAATTTACAATTGCCCTCATCTACACAACCCATACAATTGGA 1258
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 87 CAATGAAGTTTTTTCCTGTATCAAATATCTGGCAATTTACAATTGCCCTCATCTACACAACCCATACAATTGGA 160
Query 1259 TCTCAGACCACTCAAGATGGACTCGATTGGTTGATATCAACCTAGTACGGTGCCATGCTTTGAAGCTGGACTCT 1332
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 161 TCTCAGACCACTCAAGATGGACTCGATTGGTTGATATCAACCTAGTACGGTGCCATGCTTTGAAGCTGGACTCT 234
Query 1333 TTTGGCCAGTTTATTGAATTATTACCCAGCCTAGAGTTTATTTCACTGGATCAGATGTTTCGTGAACCACCCAA 1406
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 235 TTTGGCCAGTTTATTGAATTATTACCCAGCCTAGAGTTTATTTCACTGGATCAGATGTTTCGTGAACCACCCAA 308
Query 1407 GGGTTGTGCTCGAGTTGGTCTGAGTGCAGGCACAGGAATTGGTGTTTCATCAGCTCTTGTTAGCAACCAGAACT 1480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 309 GGGTTGTGCTCGAGTTGGTCTGAGTGCAGGCACAGGAATTGGTGTTTCATCAGCTCTTGTTAGCAACCAGAACT 382
Query 1481 CCAACAATGACGATAATAATGCCCAGAATAACAATGCCAACATCCACGACAACAATCACCATCATCCAGATGAC 1554
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 383 CCAACAATGACGATAATAATGCCCAGAATAACAATGCCAACATCCACGACAACAATCACCATCATCCAGATGAC 456
Query 1555 TCAGACGAGGAGAATGACTTTCGGCAAGATCTGCAGCCAGGAGAGCAGCAGTTTGCAGCTGACGCATTAAATGA 1628
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 457 TCAGACGAGGAGAATGACTTTCGGCAAGATCTGCAGCCAGGAGAGCAGCAGTTTGCAGCTGACGCATTAAATGA 530
Query 1629 GATGGAAGACATCGTCCAAGAAGATGGAGAGGTGGTGGCCGAGAGTGGAAATAATACTCCAGCTCACAGCCAGG 1702
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 531 GATGGAAGACATCGTCCAAGAAGATGGAGAGGTGGTGGCCGAGAGTGGAAATAATACTCCAGCTCACAGCCAGG 604
Query 1703 CAATTATTCCTGTGGATGTTGATGAGGAACAAGCAGGACCCAGTGGTCTTCAGCGTGTAGTAAAACCAACCTCA 1776
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 605 CAATTATTCCTGTGGATGTTGATGAGGAACAAGCAGGACCCAGTGGTCTTCAGCGTGTAGTAAAACCAACCTCA 678
Query 1777 ATTACTGTTCATGATTCAGAGAGTGATGATGAAGAAGATAGTCTAGAACTCCAAGAAGTCTGGATTCCTAAGAA 1850
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 679 ATTACTGTTCATGATTCAGAGAGTGATGATGAAGAAGATAGTCTAGAACTCCAAGAAGTCTGGATTCCTAAGAA 752
Query 1851 CGGTACTCGGCGTTACTCTGAACGTGAAGAAAAAACTGGAGAGTCAGTGCAGTCCAGAGAATTGTCA------- 1917
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 753 CGGTACTCGGCGTTACTCTGAACGTGAAGAAAAAACTGGAGAGTCAGTGCAGTCCAGAGAATTGTCAGTAAGTG 826
Query 1918 -------------------------------------------------------------------------- 1917
Sbjct 827 GAAAAGGCAAGACTCCACTTCGAAAGAGGTACAACTCCCATCAGATGGGCCAGTCGAAGCAGTTTCCCCTCGAG 900
Query 1918 -------------------------------------------------------------------------- 1917
Sbjct 901 GAAAGCAGCTGTGAGAAAGGCTGTCAGGTCACCAGTGAGCAGATCAAAGCCGATATGAAAGCAGCTAGGGATAT 974
Query 1918 -------------------------------------------------------------------------- 1917
Sbjct 975 TCCTGAAAAGAAAAAAAACAAGGATGTTTATCCCAGCTGCAGCAGCACCACCGCCAGCACAGTGGGAAACTCCA 1048
Query 1918 -------------------------------------------------------------------------- 1917
Sbjct 1049 GCTCACACAACACTGCTTCTCAAAGCCCCGACTTTGTAAGGACGGTGAACAGCGGCGGCTCTTCCGAGCCTAGC 1122
Query 1918 -------------------------------------------------------------------------- 1917
Sbjct 1123 CCTACAGAAGTGGATGTGTCCAGGCAGTGTGCCTGCTCCCCCGGTGGGTCAGAGGACTCTGAGGCCATGGAGGA 1196
Query 1918 -------------------------------------------------------------------------- 1917
Sbjct 1197 GGGAGATGCAGAGAGTTCTGTCTGCCCCAGATGCTGCTGTCACAGGCCCCAGGAATCCCAAAGGAGAACTAGCA 1270
Query 1918 -----------------------------------------------------------GAAGTAGCCAAAACA 1932
|||||||||||||||
Sbjct 1271 GGTGTTCTGATGAGGAACGTCCTTCAACCAGCCGAGCCTGTGTTGTGAATGGCCCGGATGAAGTAGCCAAAACA 1344
Query 1933 AAGCCACGTCACGCCATGAAACGGAAGCGGACAGCAGATAAATCCACTAGTACAAGTGATCCTGTGATCGAGGA 2006
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1345 AAGCCACGTCACGCCATGAAACGGAAGCGGACAGCAGATAAATCCACTAGTACAAGTGATCCTGTGATCGAGGA 1418
Query 2007 TGACCATGTGCAGGTTCTTGTATTAAAATCCAAGAATCTTGTTGGAGTCACTATGACCAATTGTGGAATCACAG 2080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1419 TGACCATGTGCAGGTTCTTGTATTAAAATCCAAGAATCTTGTTGGAGTCACTATGACCAATTGTGGAATCACAG 1492
Query 2081 ATCTAGTGCTAAAAGACTGTCCAAAGATGATGTTCATCCATGCTACCAGGTGCAGGGTACTAAAACATTTAAAG 2154
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1493 ATCTAGTGCTAAAAGACTGTCCAAAGATGATGTTCATCCATGCTACCAGGTGCAGGGTACTAAAACATTTAAAG 1566
Query 2155 GTAGAAAATGCACCAATTGTAAACCGATTTGACTATGCACAGTGCAAGAAACTGAACATGGATCAGGTACTAGA 2228
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1567 GTAGAAAATGCACCAATTGTAAACCGATTTGACTATGCACAGTGCAAGAAACTGAACATGGATCAGGTACTAGA 1640
Query 2229 CCAGATACTAAGAATGCCACCCGAGAGAAACCGCATCATATACCTACGCCCAATGCAGCAGGTGGACACTCTAA 2302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1641 CCAGATACTAAGAATGCCACCCGAGAGAAACCGCATCATATACCTACGCCCAATGCAGCAGGTGGACACTCTAA 1714
Query 2303 CTTTGGAGCAGAAGCTATTTAGTGGTCCCTACCCCTATCACATCTGTATTATCCATGAATTCAGTAACCCTCCC 2376
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1715 CTTTGGAGCAGAAGCTATTTAGTGGTCCCTACCCCTATCACATCTGTATTATCCATGAATTCAGTAACCCTCCC 1788
Query 2377 AATGTCCGGAATAAGGTGCGCATTCGCAGCTGGATGGACACTATAGCAAACATCAATCAAGAGCTCATTAAATA 2450
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1789 AATGTCCGGAATAAGGTGCGCATTCGCAGCTGGATGGACACTATAGCAAACATCAATCAAGAGCTCATTAAATA 1862
Query 2451 TGAATTCTTCCCTGAAGCCACTCGAAGTGAAGAAGACTTAAAGAAATACCCCAAGTACCCCTGGGGGAGAGAAA 2524
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1863 TGAATTCTTCCCTGAAGCCACTCGAAGTGAAGAAGACTTAAAGAAATACCCCAAGTACCCCTGGGGGAGAGAAA 1936
Query 2525 TCTATACTTTAGAAGGTGTTGTGGATGGAGCTCCATATTCCATGATTTCTGACTTCCCTTGGCTGAGGTCATTA 2598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1937 TCTATACTTTAGAAGGTGTTGTGGATGGAGCTCCATATTCCATGATTTCTGACTTCCCTTGGCTGAGGTCATTA 2010
Query 2599 CGAGCTGCAGAGCCCAACAGCTTCGCTCGATACGACTTTGAAGACGATGAAGAAAGCACTATCTATGCTCCTAG 2672
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2011 CGAGCTGCAGAGCCCAACAGCTTCGCTCGATACGACTTTGAAGACGATGAAGAAAGCACTATCTATGCTCCTAG 2084
Query 2673 AAGGAAAGGACAGCTGTCTGCAGACATCTGTATGGAAACAATAGGAGAGGAAATTTCAGAGATGCGTCAGATGA 2746
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2085 AAGGAAAGGACAGCTGTCTGCAGACATCTGTATGGAAACAATAGGAGAGGAAATTTCAGAGATGCGTCAGATGA 2158
Query 2747 AGAAGGGTGTATTTCAGCGAGTAGTGGCAATTTTTATCCACTATTGTGATGTCAATGGAGAGCCAGTTGAAGAT 2820
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2159 AGAAGGGTGTATTTCAGCGAGTAGTGGCAATTTTTATCCACTATTGTGATGTCAATGGAGAGCCAGTTGAAGAT 2232
Query 2821 GACTACATT 2829
|||||||||
Sbjct 2233 GACTACATT 2241
