Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_12772
- Subject:
- XR_001741332.2
- Aligned Length:
- 3600
- Identities:
- 187
- Gaps:
- 3408
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GGCGCTCAGTGAGACTTTCCTGTCACTGGCTACTACTACTCCCAACCCTCCTCAAAGCCGCCGGAGCAACCCCC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AGGTCTTTACTTTACAATCGGCAATTTGACTTGCTCTGCTGCATGTCTGGAGGGACCAAGGAAAGTGTGGAGAC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GCTCCAAGGATTAGGTGATCGGAGCTTGAAAAGAAAAAAAGCCAAACAAATAAACAAAACCCACCCACCCTAAC 222
Query 1 ----ATGAGGCTGCTGGAGAGAATGAGGAAAGACTGGTTCATGGTCGGAATAGTGCTGGCGATCGCTGGAGCTA 70
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 AAATATGAGGCTGCTGGAGAGAATGAGGAAAGACTGGTTCATGGTCGGAATAGTGCTGGCGATCGCTGGAGCTA 296
Query 71 AACTGGAGCCGTCCATAGGGGTGAATGGGGGACCACTGAAGCCAGAAATAACTGTATCCTACATTGCTGTTGCA 144
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 AACTGGAGCCGTCCATAGGGGTGAATGGGGGACCACTGAAGCCAGAAATAACTGTATCCTACATTGCTGTTGCA 370
Query 145 ACAATATTCTTTAACAGTGGACTATCATTGAAAACAGAGCTTCTTACT-------------------------- 192
|||||||||||||||||||||||||||||||||||||||...||.||.
Sbjct 371 ACAATATTCTTTAACAGTGGACTATCATTGAAAACAGAGGAGCTGACCAGTGCTTTGGTGCATCTAAAACTGCA 444
Query 193 -------------------------------------------------------------------------- 192
Sbjct 445 TCTTTTTATTCAGATCTTTACTCTTGCATTCTTCCCAGCAACAATATGGCTTTTTCTTCAGCTTTTATCAATCA 518
Query 193 -------------------------------------------------------------------------- 192
Sbjct 519 CACCCATCAACGAATGGCTTTTAAAAGGTTTGCAGACAGTAGGTTGCATGCCTCCGCCTGTGTCTTCTGCAGTG 592
Query 193 -------------------------------------------------------------------------- 192
Sbjct 593 ATTTTAACCAAGGCAGTTGGTGGAAATGAGGCAGCTGCAATATTTAATTCAGCCTTTGGAAGTTTTTTGGGCAT 666
Query 193 -------------------------------------------------------------------------- 192
Sbjct 667 CGTTATAACACCCCTGCTCCTGCTGCTTTTTCTTGGTTCATCTTCTTCTGTGCCTTTCACATCTATTTTTTCTC 740
Query 193 -------------------------------------------------------------------------- 192
Sbjct 741 AGCTTTTTATGACTGTTGTGGTTCCTCTCATCATTGGACAGATTGTCCGAAGATACATCAAGGATTGGCTTGAG 814
Query 193 -------------------------------------------------------------------------- 192
Sbjct 815 AGAAAGAAGCCTCCTTTTGGTGCTATCAGCAGCAGTGTACTCCTCATGATCATCTACACAACATTCTGTGACAC 888
Query 193 -------------------------------------------------------------------------- 192
Sbjct 889 GTTCTCTAACCCAAATATTGACCTGGATAAATTCAGCCTTGTTCTCATACTGTTCATAATATTTTCTATCCAGC 962
Query 193 -------------------------------------------------------------------------- 192
Sbjct 963 TGAGTTTTATGCTTTTAACTTTCATCTTTTCAACAAGGAATAATTCGGGTTTCACACCAGCAGACACAGTGGCT 1036
Query 193 -------------------------------------------------------------------------- 192
Sbjct 1037 ATCATTTTCTGTTCTACACACAAATCCCTTACATTGGGAATTCCGATGCTGAAGATCGTGTTTGCAGGCCATGA 1110
Query 193 -------------------------------------------------------------------------- 192
Sbjct 1111 GCATCTCTCTTTAATATCTGTACCCTTGCTCATCTACCACCCAGCTCAGATCCTTCTGGGAAGTGTGTTGGTGC 1184
Query 193 -------------------------------------------------------------------------- 192
Sbjct 1185 CAACAATCAAGTCTTGGATGGTATCAAGGCAGAAGGGAGTGAAGCTGACAAGGCCGACAGTATAACAAAGGAGG 1258
Query 193 -------------------------------------------------------------------------- 192
Sbjct 1259 TGGACTTTCTGTAGCAATGTATATATGTACAGGATTGTACATACTAGCAATTCTGAAGACTTGTACTTGTGAAT 1332
Query 193 -------------------------------------------------------------------------- 192
Sbjct 1333 GTTGCCTCAATGCATATTTTATTTTTTTACACAAAAATATGAGATCCTGTTTAAGTGCCTTAAAATGTATTTGA 1406
Query 193 -------------------------------------------------------------------------- 192
Sbjct 1407 CAAGAGCGTTATTTCCAAAATATGCTTTGTTGATTACTGCCAGGGGTGGTACAATATTTGGGGGTTAATTTTGC 1480
Query 193 -------------------------------------------------------------------------- 192
Sbjct 1481 TTTCCTAATGCAGGAATCAGTCATGGTAAGTGACAAAAAGCAAACATGCTTTCCCTGCAGCACCTTTGTGCAAT 1554
Query 193 -------------------------------------------------------------------------- 192
Sbjct 1555 ACAACCCTATAGTAGTTACTGTAATGTTTGAAATGAGGTCACACCATCAGGAAAATGCCCTTCTGATGACAGTG 1628
Query 193 -------------------------------------------------------------------------- 192
Sbjct 1629 AAAATTTCCAAAGTCTTATTCATGCATACTTTGATTTACTGTGTGATTCTTTTTTTCTACGACTGTGACATGCC 1702
Query 193 -------------------------------------------------------------------------- 192
Sbjct 1703 TCTTCCTTATCAACTCAGCAGGGGTCATAGATCGAATAGATGCTGAAAAGCGTAAGATATATGCATTCCTTGAC 1776
Query 193 -------------------------------------------------------------------------- 192
Sbjct 1777 ATCATTTTTAAAGACATTCCTTCAAATAGTTTCCACACAGAAATTCCTCACTCCCATTATGAGAGATTGTGGTT 1850
Query 193 -------------------------------------------------------------------------- 192
Sbjct 1851 ATATGTCTTAAATTTATTATAAGCTGCTTCAAAGAAAGGGTCTGAATGTTTGAATTATGAGTGAAATCATGTGA 1924
Query 193 -------------------------------------------------------------------------- 192
Sbjct 1925 AATTTTGAGTTAAACTCTGTGATTTGATTTTCAGGGTCTTTAAAATATATCTTAATATCTTCTTCCTCTTTATT 1998
Query 193 -------------------------------------------------------------------------- 192
Sbjct 1999 CAATAATTTCTGTCTTGCACTTACACACTCATAACAGCCAAATATGAGGCACAAAAATGTTACAATCAGTTTGA 2072
Query 193 -------------------------------------------------------------------------- 192
Sbjct 2073 AAGCAGCATCAATTAATGGTAGATTCTATTCACATTCCACAACCCAGACCAAATTTTTTTCCTATTACGCAGAT 2146
Query 193 -------------------------------------------------------------------------- 192
Sbjct 2147 GTGCTGAGCACTTTCCAGATTGCCCCTGTTGGCCAAAAGCAGCCTGTTACATCCTGGAATTAAGCACACTTAAG 2220
Query 193 -------------------------------------------------------------------------- 192
Sbjct 2221 ATGAAAAGAACATGCAAAACCATTTAATAACCAAAATATCAAGTAAAATTAGTTCCCAACGGGGCAGCAGCTTT 2294
Query 193 -------------------------------------------------------------------------- 192
Sbjct 2295 CAAATGAGTGTCCAATATTTGCTTCTGCTATAGCTGCAAGAACTGTAACTGGACCCAAGTAGAGAATGAAGCCA 2368
Query 193 -------------------------------------------------------------------------- 192
Sbjct 2369 CGTATAGAACTACGAGAACACTTTTCTGTGTTTCCCCCATGCCGTCCTGTCACATCCTCTTACACGTCCTCTCT 2442
Query 193 -------------------------------------------------------------------------- 192
Sbjct 2443 TGATTTGATAGACAATATTGGCATCCTGGGTCTCACTGAGGCCGTGCTATGTCCTCAGCAGCTGTTTTTGTTGT 2516
Query 193 -------------------------------------------------------------------------- 192
Sbjct 2517 TTCGTTATTATGCCCACAACAAAAAATCATTCCTTAGAAACTCACCAAGTTTATCTACTGTGTAAATTTATATT 2590
Query 193 -------------------------------------------------------------------------- 192
Sbjct 2591 ATTGTTACTACCAGGTCTCATCTTTTGTCAATGTCATTGAATAAATTTCATAAGAGTTATTCTCAGTGTGAATT 2664
Query 193 -------------------------------------------------------------------------- 192
Sbjct 2665 TTAAGGCTAATGCCAGATCCTGCAAAAATCTATGCTAACCAGGCTGTAGTACACACTGTTATAAAGAATTTTAC 2738
Query 193 -------------------------------------------------------------------------- 192
Sbjct 2739 TTGTGTCTAAAACTACAGTAATTTTGCTTAGGTAATTGTGCTTACCTATGGAGCACAGGAAGGCTCTTAGGTTT 2812
Query 193 -------------------------------------------------------------------------- 192
Sbjct 2813 TGTTCCTACAAGTTTCTTTGAATTTTGGAGTAAATGGAAGTGTCTGTCTGTCTGTCATCTATCTGCCCTATCAT 2886
Query 193 -------------------------------------------------------------------------- 192
Sbjct 2887 AAAAATCTTTCTCCCTAACATTAAAATACTGATCCCCGCCCCCAACTTATCTACCTCTATTGTCTAACACCTAT 2960
Query 193 -------------------------------------------------------------------------- 192
Sbjct 2961 AGTAGGTGTGATCATGGGATAAAATTCAACTGAAAATGCTATGATAACATTTTATCGTTTGCTTTAAAAATGTG 3034
Query 193 -------------------------------------------------------------------------- 192
Sbjct 3035 CTTTGTTTTCAAATAATCTTTACATAGTGAACTTTGGTGGCGTTAGTGATATGTTTATGCCTATTTCTTTTTTT 3108
Query 193 -------------------------------------------------------------------------- 192
Sbjct 3109 TACACAAATTCCTTGGCATATTTTTTCATAAAGAACAAAAAATAAAATCAAAATTTATTTTTAATTCATGCTTA 3182
Query 193 -------------------------------------------------------------------------- 192
Sbjct 3183 TTGGGATTTAATTATTCAGAGCTTAAAATATTTTGTTATGTTTATACACTGTAAAGCTATCTGTTTTATGCATT 3256
Query 193 -------------------------------------------------------------------------- 192
Sbjct 3257 TGTTTTGTCTAAATGTATTTATGAAAGAAATACATTAGATTATATTTATGTTTACTCATTTTTCCACCTGGATT 3330
Query 193 -------------------------------------------------------------------------- 192
Sbjct 3331 TTTTTTAATGGTTGTTACAAAATTAGATTTTTTAATGGGTAATAATGTTGGTATTTTCATGTTTTTTCTTAGTA 3404
Query 193 -------------------------------------------------------------------------- 192
Sbjct 3405 TTAAAATTTTTGTGGGTTTTTTAAAATTTTTCCCTATTCTGTTAAAAATTAACACACCTCTAGCTAATGTTCAG 3478
Query 193 -------------------------------------------------------------------------- 192
Sbjct 3479 TGTTTGTGCTAAATACCAAATTTTTTCAAAAGGATTGGTTAAGTCATAAAGTGGATTATTTATGATGACTGGAA 3552
Query 193 ------------------------------------------------ 192
Sbjct 3553 GATGAAAATAATTATATGATTAAACAAAGAATGTTTCAGAAATCACAA 3600
