Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_12773
Subject:
XM_011532311.2
Aligned Length:
1074
Identities:
519
Gaps:
555

Alignment

Query    1  ATGAGGCTGCTGGAGAGAATGAGGAAAGACTGGTTCATGGTCGGAATAGTGCTGGCGATCGCTGGAGCTAAACT  74
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGAGGCTGCTGGAGAGAATGAGGAAAGACTGGTTCATGGTCGGAATAGTGCTGGCGATCGCTGGAGCTAAACT  74

Query   75  GGAGCCGTCCATAGGGGTGAATGGGGGACCACTGAAGCCAGAAATAACTGTATCCTACATTGCTGTTGCAACAA  148
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  GGAGCCGTCCATAGGGGTGAATGGGGGACCACTGAAGCCAGAAATAACTGTATCCTACATTGCTGTTGCAACAA  148

Query  149  TATTCTTTAACAGTGGACTATCATTGAAAACAGAGGAGCTGACCAGTGCTTTGGTGCATCTAAAACTGCATCTT  222
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  TATTCTTTAACAGTGGACTATCATTGAAAACAGAGGAGCTGACCAGTGCTTTGGTGCATCTAAAACTGCATCTT  222

Query  223  TTTATTCAGATCTTTACTCTTGCATTCTTCCCAGCAACAATATGGCTTTTTCTTCAGCTTTTATCAATCACACC  296
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  TTTATTCAGATCTTTACTCTTGCATTCTTCCCAGCAACAATATGGCTTTTTCTTCAGCTTTTATCAATCACACC  296

Query  297  CATCAACGAATGGCTTTTAAAAGGTTTGCAGACAGTAGGTTGCATGCCTCCGCCTGTGTCTTCTGCAGTGATTT  370
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  CATCAACGAATGGCTTTTAAAAGGTTTGCAGACAGTAGGTTGCATGCCTCCGCCTGTGTCTTCTGCAGTGATTT  370

Query  371  TAACCAAGGCAGTTGGTGGAAATGAGGCAGCTGCAATATTTAATTCAGCCTTTGGAAGTTTTTTGGGCATCGTT  444
            |||||||||||||||||||||||||                                       ||||||||||
Sbjct  371  TAACCAAGGCAGTTGGTGGAAATGA---------------------------------------GGGCATCGTT  405

Query  445  ATAACACCCCTGCTCCTGCTGCTTTTTCTTGGTTCATCTTCTTCTGTGCCTTTCACATCTATTTTTTCTCAGCT  518
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  406  ATAACACCCCTGCTCCTGCTGCTTTTTCTTGGTTCATCTTCTTCTGTGCCTTTCACATCTATTTTTTCTCAGCT  479

Query  519  TTTTATGACTGTTGTGGTTCCTCTCATCATTGGACAG-------GAA---------------------------  558
            |||||||||||||||||||||||||||||||||||||       |||                           
Sbjct  480  TTTTATGACTGTTGTGGTTCCTCTCATCATTGGACAGATTGTCCGAAGATACATCAAGGATTGGCTTGAGAGAA  553

Query  559  --------------------------------------------------------------------------  558
                                                                                      
Sbjct  554  AGAAGCCTCCTTTTGGTGCTATCAGCAGCAGTGTACTCCTCATGATCATCTACACAACATTCTGTGACACGTTC  627

Query  559  --------------------------------------------------------------------------  558
                                                                                      
Sbjct  628  TCTAACCCAAATATTGACCTGGATAAATTCAGCCTTGTTCTCATACTGTTCATAATATTTTCTATCCAGCTGAG  701

Query  559  --------------------------------------------------------------------------  558
                                                                                      
Sbjct  702  TTTTATGCTTTTAACTTTCATCTTTTCAACAAGGAATAATTCGGGTTTCACACCAGCAGACACAGTGGCTATCA  775

Query  559  --------------------------------------------------------------------------  558
                                                                                      
Sbjct  776  TTTTCTGTTCTACACACAAATCCCTTACATTGGGAATTCCGATGCTGAAGATCGTGTTTGCAGGCCATGAGCAT  849

Query  559  --------------------------------------------------------------------------  558
                                                                                      
Sbjct  850  CTCTCTTTAATATCTGTACCCTTGCTCATCTACCACCCAGCTCAGATCCTTCTGGGAAGTGTGTTGGTGCCAAC  923

Query  559  --------------------------------------------------------------------------  558
                                                                                      
Sbjct  924  AATCAAGTCTTGGATGGTATCAAGGCAGAAGAAACTACTCCAAACCAGGGGGCCACTGGCTAACTTGAATAATC  997

Query  559  --------------------------------------  558
                                                  
Sbjct  998  CAGAAGGCTTGGAATATCTATCCATCAAATTTGGGCAT  1035

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