Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_12783
Subject:
NR_022006.1
Aligned Length:
4325
Identities:
190
Gaps:
4111

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  AATCATCTCATCTCAGATGCCTGGCAACATCTAATTCCTCAGCTCCTTTTCAGTAATTTCAGTTCTATTTTCTT  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  ACTCTATCATTCTGGTGTTTTCATTGCATTTTCTTATAAAAGAGATCCAGATTTATTTTGGAAATAGATTTGAA  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  TGACGAAAACATCCTATAGAAGCAAATCCTAAACAAATATAAATATTTGACCATGATTATGCAAAGAAAGCTCC  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  TGCTTCCTCCTCTGTGTCACAGAGACCCTCGGGAGGAACTCCAGGGAGAATGGAAGCTTGGGAGTCATCCCAAC  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  CCTTGCTCAGGTGCGAAATCCCCTGCCCTCTGCCTGGCACTGATAGGGACGGATCAGTTTCTCTGCCTGGAGAG  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  GCAGCCTCCTGTGACCTGGATACATTGGAGCCTGAACACGGGAACAGAAGGGTCTCTGGGAATCCAATCTCAGT  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  CTGTTGGGCTTACAAAGTGACCAAAGTCAAATGCTGGTCTGTGAGAGAAAGAGGAGGCAGACACATCGGGGGAC  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  CGAGAAATACTTTGAAGCACCCCGCTCACCATGGTATGGGGAAGAATTTGGCCACATCCCTGCCAACTGCTGCT  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  TCTCTTGGACTGGGAAAGGGTCAGTTGCTTGTTTCTATCAGATTCATGGACACCACCAAGAAAAGAGGCCAGTC  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  TGAGACATTCAATATTTGTTGAAACACAGAGGTTTAACTGATCATTGAGGTACACAGGGTGATAGGAAGAGTAT  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  GAACTTGAGAATCTGATGGATTTTGTTTAAAGTTAGGACTAGGCTACTGACTACCCACCCTGCTAATTGTCTTG  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  GGGAAGTTATTTAACCTCTCTGAACCTCAGCTTCTCATCCACAAAATAGGACACTAGCACACAGTGGGCTATCT  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  ATATATATTTATTGAATTGAAATGGGAGTATTCAAAATTATTTGGGTTGTTGGCTTAAAATAAGCAGAATAATT  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  CAATTCCTGTTCATCTGGAATCTAATTGTCCAATTTGGAGTTTCAGATGTAACAAAGATCCTAATGACCTAATA  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  TTATTGGGGTAATCCTAAAATTTATTAGGTGATCTGCAAGTTCCATGATGATTGTATACTGGAGGAAATGCACA  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  ATGCACACAGACCTTCCTAGGAGTAAAAGACTGATGTGAATTTGCAGCACTACTTAATTATAAGTAATTGTTGC  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  ATGAACACACACACAAACACACACCCACAGAACTCACACTATAAGATAGGAGGGGCAAATAATGACATTTGACA  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  AAAATGAGCTCTTGCAGAGCTCAACGAGTCTAAGTTTCCTCCCTAATATCTTAACAGGCTACAGTATACACAGG  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  CTTTTAAGTAATGTACTTGTTATCCAAACACTAGCAGACATTTAACTGGAATCCAGGAGCATTTTGTCAAGAAG  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  GAAAAGAACTAACCAAAGAAAAAGAAAAGTAGAGAGTTTCCCAGCTGTTTTACCACATCACAACTTCAAAAAAA  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  CCAAGCCTGTCCTTGCCTTGTCCCTGATGGCTCTGCCAGCAGAGTGAATGAATTGGAGCAGATTTAGGTTTTAA  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  AATGCCTCCTAATATCATTTGGGCAGATTAGCTTACATGGCTGGACATTGTGCTCCCAGCCACAGGGAATGTTC  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  TTTTCCTGTTGGAAGCTCTGACAGCCACTGCCACGGTGAAATATCAGGAGCCTCCTAACATTTTTCTTGATTTC  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  TTTAAGAGTGAACATTAGACATATTAAAAACAACAACCCAATCATTAAGCCCTGTGAGGTTTTCCTAGGAGCCA  1776

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1777  GCTCTATCGCTTTAATCAGATTACGGACAACTCATTCTCATCCCAGCCATTTATCTTCTTTGTTTACACACACA  1850

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1851  CCAAGTGGCATTCTTCTTAGCATCAAAAAATAGTAATCAAAATTGAGAACAACAAAAGACCTTTCATTATTTAC  1924

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1925  AGTGTTAAGTAACATCTATTTGCCTTCATTAGTTTCTAAACAACGAAGTACACTGGTTCTGATTAAAGCTGGCA  1998

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1999  TGTGTTAATTATATCCGAGGTCTGGGATTGTTTTGTCTACAATAAAGGATTGCTGAAAGCTGAAATTTGAGGCG  2072

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2073  CCCAGGCCCCAGAAATCACCTGCCTCTATGTGTTTCCTCAGTGAGAGTTTCCAGCCTGAGAATGGCAGAAGCGG  2146

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2147  ATGTGAGCTTGTCACAGAAAGTTTTTTTTGCTTTGTTTTGTTTTGTTTGGTTTTTAAGCCCTCGGTTTTATTGC  2220

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2221  CCATTTTATGGGCTGGAGTTAAATGGAAGTACAATGCAGTTTGCTGTCTTACTGCTCAGCACTAACAGCCATGA  2294

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2295  TGAGCCATAATTAGAAGTAAAACCACCACATAAATAACATGGTAGAAAAATTGCCACAGTGAGAAGCCAGACTT  2368

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2369  TGGCGACGGGAAACTTCAGCGGGTCTTGAGTATCCATCATACTTAAGGGGCACCGCGTATTTTAGCCCATATTT  2442

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2443  GTCTTACTAAAGCCAAAATGGGAGCCATTTAGACTTTCGAACAAGCTTTTAAAAATAGAGAATGTAGGCTTAAA  2516

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2517  CAGACTGCCTGCTGCTAAGTGTGATGAAGAAACCTGTCACCTGGAGGCTACGACAGCTGGAAGGGCTGGGAGGG  2590

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2591  AGAGCCCTGGGAGCCCAGGGGTGAGGAAGGGAAGATAAACAGGAGAGGAAGAGGAGGCCTGGACTCTCCACAAC  2664

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2665  AGCAAGGTCTAGACATTTCACTGCAAAGCCTAAGAGTCTGCACACCGTTGAGCACAGCAGCTTAGACTTCCGCC  2738

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2739  GGGGAACGTGTGAGGCTGGGACGCCTTGCAGATTTTGCTTTCATGACCTGTACTCAGCGATGAAGTGGGAGCAG  2812

Query    1  --------------------------ATGGAGTCTCATTCTGTCGCCCAGACTGGAGTGAAGTGGCATGATCTC  48
                                      ||||||||||||||||||.|||||.||||||||.||||||.|||||||
Sbjct 2813  GTAGACTAGTTTTTTTTTTTTTTTTAATGGAGTCTCATTCTGTCACCCAGGCTGGAGTGCAGTGGCGTGATCTC  2886

Query   49  GGCTCACTGCAACCTCTGCCTCTCGAGGTCAAGCGATTCTCCTGCCTCGGCCTCCGGAGTAGCTGGGATTACAG  122
            ||.|||||||||||||||||.|.|..|.||||||||||||||||||||.|||.||.||||||||||||||||||
Sbjct 2887  GGTTCACTGCAACCTCTGCCACCCATGTTCAAGCGATTCTCCTGCCTCAGCCCCCTGAGTAGCTGGGATTACAG  2960

Query  123  GCACACGCAACCATGC--CCGGCTAATTTTTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGG  194
            |..|..||.||  |||  |.||||||   |||||||||||||||||||||||||||||||||||.|||||||||
Sbjct 2961  GTGCCTGCCAC--TGCGTCTGGCTAA---TTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATCTTGGCCAGG  3029

Query  195  CTGGTCTCGAACTCCTGACCTCAAG-------------------------------------------------  219
            |||||||.|||||||||||||...|                                                 
Sbjct 3030  CTGGTCTTGAACTCCTGACCTTGTGGTCCACCCGCCTCGGCCTCCCAAAATCCTGGGATTACATGCATGAGCCA  3103

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3104  CGCGCCCAGCCTAGACTAGCATTTTTGAGTACCCACTATCTCCTTGGCATTTTACTTCCATTTTAATTCTCATA  3177

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3178  ACAGCCTTAGGACGCCAATGAAAAGGAAGAGAAAATAAAGTGTGTTCTGTGCCTGAAAATGGCCTTAAAGAAAC  3251

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3252  AAGGACCAACAGCTGGAGCAGAGTGGGGCTGCCCATACGCAAAGAGACAACAAGTAGGAATTAACATAAGGCAT  3325

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3326  ATCACGTGGATGCCATAGAACTATCACAGCAATTTCTTTTTTCCCCAAGTCAGCCTCTCTTGTACAGGGGATTA  3399

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3400  GAAAACAAACCCAAGAGAATAAACTTGAAATGGAAGGAACGTGCTTTGTAGTCGAGTGTTTTTCAAAGCCTGCA  3473

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3474  TCATTTTAAAAACTGATTTAAGTATATTCATTTGCTTTCTAAAATAAGTCATATGTATGTTTCTACTGATCGGC  3547

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3548  CAGAATAGTTAAGGTCTGTCTGATCTTCATATGGAATGAAAGGGGACATTCTTTGGATATTCTGGAAGTCCACA  3621

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3622  CGTGTTCTTTACAGAGTTTGGTTTGCTTTCTCCGTTTCTTCCTTCCTTTGCAAAATCAAACAAACAGGAATAAA  3695

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3696  AACCAAACCAAAACAAAATTAATGAAAACCCTTGTGTTGAGGACTTTGTTTTGTTTTAAATGTGTCTGGTATTA  3769

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3770  AGCAGTATGTTTAGTGAAATGACTTTAAACTTAAGTAGGAAATACAGCTCCATTTCACACGTGGATTTTGTCTG  3843

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3844  CATTTACATCTCTGCAGGCCTCACATGCCGTGACACCAGACATTTTTTTAATTAAGATATGAAGTGCTCATTTT  3917

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3918  TTTTTTGTGGAACTGCTGTATTCTAACAAATTTACTACACGTCTCAGAAAACACATAGCTTTGCCAAAGTTGGT  3991

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3992  GAGTAGCCCAGCATGGTTTATCTCCAGCCCACAGCTCTTTCCCTGAATTCAATACTGCAGGCACAATTTAATGC  4065

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 4066  AAACCCAATTTATGACTTAATGCTCTAGGGACCGTAGTGGGAGATTGTTACATTATTCTTTTCTAATCCTATTT  4139

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 4140  GTGTTTTAATTTGCTAAGTCTGTAATGAGGTGCATGCCTTGAATATTCAAGATCTTTGACATTGCTTTTGACTT  4213

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 4214  TGTTTAATATAATAGATTTTACAGTTTGCATTAAATACCCAGGTGCTTCGGTCAGTATTATCTCTTTATTTTCT  4287

Query  220  ---------------------------------  219
                                             
Sbjct 4288  CAACTAGAGTGAATAAAATTACACGATGAAAGT  4320

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