Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_12783
Subject:
NR_145697.1
Aligned Length:
3073
Identities:
190
Gaps:
2859

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GTTGTGGGAAACCGCGCTGGACGCTGAGAATGTGCGGAAGGATCCTGAGGGGAGGACGCGAGACAGCGCGAGGA  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GAGACGAGGAGAGTTAGGGTTGGCCGGGAGGGTGCGAAGATGAAGCGACCACTGGAGGCTGTGAGGGTGAAAGG  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  AGCAAGAATCGTCTAGAGACGGGCTGGGCCGGTGCTGGGGCCAAAGGCTTCTGTCTGTCAGGCCCTTTTTGGCG  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  CTCACTCTAGAAAGAAGAGGCGGAGACGCGAAGAGATCGGGTTAGAGTCAGATTTTCGAAGCACGGAGATGGGT  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  TCAATGAAAGGACGAGGAAAGACGAGAAACCAGCGGCCGGAGAACGGAGGTGGCCGCCGCCGTCCTTTGCTCTG  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  CTCGGGGCTGGGCGCCGCCCGGAGAGCCCTCCCGGAGGGGGCGGGGCGGGGCCGGGTGAACAGAGCTGGGCGGG  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  CTCGCCAGCTCTTCCAGGCGCCCTGGGCAAGCAATAGTTCAACAATTTTTATGAATTTCTAATCCAACCTCATC  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  ATCCTATGGGAAACAGAAGACCACCAAGAACAGCCAGCTGAGACAGAATTTCACTGTGTTGCCCAAGCCAATCT  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  TAAACTCCTGGTCTCAAGCGATCCTCCTGCCTTGGCCTCCCACTGTGCCTGGCCTATGGACTCTGAATTTTTTT  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  AAAAGACTGGAAAAAACTTTTATAAGAGAATTGGAAATTTGGACAATGGAATCTCATTCTGTCACCAGGCTGAA  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  GTGCAGTGACGTGATCTTGGCTCACTGCAACCTCCACCTCCTGGGTTCAAGCGATTCTCCTGCCTCAGCCTCCT  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  GAGTAGCTGGGATTACAGGTATCTTGGCAGTAACCTCCTCCATATATTTCCTTGGCCCTCAGCTTACATCTAGC  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  AAAATGACTCTACTGGTTCCAGGCTTCACATGCATACAACATGGTGTTGGAGGAACAGAGATGTTTTCTCTTCC  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  TGGTGTTTTCCCAGACATTTCTTAGCTGGCATTTCAAACAAGGGTCCTGAAATTCACCCTGGTTGGGTCGTGTT  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  CTCCCCTTCCCATTCCCCATCCCCACCCTCAACCGAAAAATGATGTAAGCAGGGGAAATTGAATGTACCAATGT  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  TTGTTTTTAAACAAGCCACAGACCCCTCCCCAACTCCCCGACTGAAGCTTGAAGTGGGATCAGCTTTCCCTAAA  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  GTACTTGAGCTTATGGTAAAGCATATATGTTATCCAAGTTAAAGTCTGGACGCTGTTAGTAATGGGAAGGCAAG  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  TAATGAATGTTAGCTATGGAGCCAACAGACAGTGTCCACTCCATTGTCTTTAAGGCCCAACTAAAGATAACCTC  1332

Query    1  -------------------------------------------ATGGAGTCTCATTCTGTCGCCCAGACTGGAG  31
                                                       |||||||||||.|||.||.||||..||||||
Sbjct 1333  TTTACCAATGTCGGTTTATTTATTCATTTATTTATTCATTGAGATGGAGTCTCACTCTCTCACCCAAGCTGGAG  1406

Query   32  TGAAGTGGCATGATCTCGGCTCACTGCAACCTCTGCCTCTCGAGG-TCAAGCGATTCTCCTGCCTCGGCCTCCG  104
            ||.|||||.||||||||.|||.|||||||..|||||||| |.||| |||||| |.||||||||.||.||||||.
Sbjct 1407  TGCAGTGGAATGATCTCAGCTGACTGCAATTTCTGCCTC-CCAGGTTCAAGC-AATCTCCTGCTTCAGCCTCCC  1478

Query  105  GAGTAGCTGGGATTACAGGCACACGCAACCATGCCCGGCTAATTTTTTTTGTATTTTTAGTAGAGATGGGGTTT  178
            .|||||||||||||||||||.|||.|.|||||||||||||||   ||||||||||||||||||||||.||||||
Sbjct 1479  AAGTAGCTGGGATTACAGGCGCACACCACCATGCCCGGCTAA---TTTTTGTATTTTTAGTAGAGATAGGGTTT  1549

Query  179  CACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAG---------------------------------  219
            ||||||||||||||.||||||||||.||.||||||||||||                                 
Sbjct 1550  CACCATGTTGGCCAAGCTGGTCTCGGACACCTGACCTCAAGTGATCTGCCTGCCTCGGCCCCCAAAGGTGTGAG  1623

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1624  CCACTGCACCTGGCTACAATGTCAGTTTCTATAAAAACTGCCTTGACTTGTTTTGTTTGCTTGTTTTGTTTGTT  1697

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1698  TGTGTTTTAATTTTTATTATTTTTTTTTAGAGACAGGGTCTCAATCTGTTGTCTAGGCTTGAGTGCAGTGGTGC  1771

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1772  AATCATAGCTCACTGAAGTGTTGGACTCCCAGGCTCAAGCAGTCCTCCCACCTCAGCCTCCCAAGTAGCTGAGA  1845

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1846  CTACAGGCATGCACCACCCTGTCTGGCTAATTTTTTATTTTTAGTAGAGATGAGGTCTCACTATGTTGCCCAAG  1919

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1920  GTGGCCTCAAACTCCTGGCCTCAAGTACTCCTGTGGCCTTAGCCTCCCAAAGCTCTGGGATTGCAGGTATGAGC  1993

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1994  CGCCATGCCTGGCCTACTGTATATTTTATGCATTTGATATAAGTCTTGCCTCCCTAAGTATATTACAAGTCCCT  2067

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2068  TGAAGTTAAAGACATTAGATTCCTACTCAGTGCTGAGCTGCAACAGAGAGCACTCAATGATGGATAAAATAGTT  2141

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2142  TTAGCATGCATTCAGCGATATATATTTAGAAAGTGGAACTAGGTGGTTGAAAAAAGTGTATAGATGGGTGGAAG  2215

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2216  GGAATATTACAGCTCTTAGAATTGTCCTAAGGTGAGAGTAACAAATTAAGCAATGAGTCCCTGGGTTCACTCAA  2289

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2290  GCAACTTCACTCTCTAAAACAAGAGCCCACAGAATCCCATTTCTGCTTTCAGAATGAGTTTGAGGCCAATATTA  2363

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2364  TTTCCATTTTTTTTCTTTTTCTTTCTTTCTTTTTTTTTTTTTTTTTTTTGAGACGGAGTTTCACTCTTGTTGCC  2437

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2438  CAGGCTGTTTTGATCTCGGCTCACTGCAACCTCTGCCCCTGGGTTCAAGCGATTCTCCTGTCTCAACCTCCCAA  2511

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2512  GCTGGGATTACAAGCATGCGCTACCACACCTGGCTAATTTTGTATTTTTAATAGAGACGGGGTTTCTCTGTGTT  2585

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2586  GGTCAGGCTGGTCTCAAACTCCCAACCTCAGGTGATCTGCCCACCTTGGCCCAGCCTCCAATATGATTTTCTAA  2659

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2660  TAGCTGTGTTTGATGATTATATTTATTCCTCCATCAGTAGCTTTTTTAGCCTTGAAAATATCTATTTAAGTTTC  2733

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2734  TTATTTCCTTTGGATCTATCAAAGTGTTTTTCCCCAAGTGGCACCTGGGAAAACATATTCTATTCATTTATTTT  2807

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2808  ATAACTGTTCCCTTGACCTCTTTATTGCTTCCCTATTACAACCCAAGATGCTCTTGTAAACCTGACTTAATATT  2881

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2882  GGCAGTCTTCATCCCTTGCAAATGGAAGTGATGACAGACCCAATACTTTGTGTAAAAATATTTTGCTATTTCTA  2955

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2956  TACAAAATATTTTATTAATGGAAACCACATGTTATGTATTTTACATATGTTATGACTTGAAATTTATGTTATGA  3029

Query  220  ---------------------------------------  219
                                                   
Sbjct 3030  CTTGAAATTGGGGAATCTGATATGTCTCTAATAATAAAG  3068

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