Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_12783
Subject:
NR_163905.1
Aligned Length:
3120
Identities:
189
Gaps:
2905

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GCGTCGCTAAGGAGCGACGGGCTGTCGGCCAGACCCCGAGTTCTCGGTGCGCTCAGCGGCCGCCGACGCTAGGA  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GGCCGCGCTCCGCCCCCGCTACCATGAGGCCCCGGAAAGCCTTCCTGCTCCTGCTGCTCTTGGGGCTGGTGCAG  148

Query    1  -------------------------------------ATGGAGTCTCATTCTGTCGCCCAGACTGGAGTGAAGT  37
                                                 |||.|||.|||.||||||.|||||.|||||.||.|.|
Sbjct  149  CTGCTGGCCGTGGCGGGTGCCGAGGGCCCGGACGAGGATGAAGTGTCACTCTGTCACCCAGGCTGGAATGCAAT  222

Query   38  GGCATGATCTCGGCTCACTGCAACCTCTGCCTCTCGAGG-TCAAGCGATTCTCCTGCCTCGGCCTCCGGAGTAG  110
            |||..|||||||||||||||.||||||.||||| |.||| ||||||||||||.|||||||.||||||.||||||
Sbjct  223  GGCGCGATCTCGGCTCACTGTAACCTCCGCCTC-CCAGGTTCAAGCGATTCTTCTGCCTCAGCCTCCCGAGTAG  295

Query  111  CTGGGATTACAGGCACACGCAACCATGCCCGGCTAATTTTTTTTGTATTTTTAGTAGAGATGGGGTTTCACCAT  184
            ||||||.|||||||.|..||.|||||||||||||||   ||||||||||||||||||||||.||||||||||||
Sbjct  296  CTGGGACTACAGGCGCGTGCCACCATGCCCGGCTAA---TTTTTGTATTTTTAGTAGAGATTGGGTTTCACCAT  366

Query  185  GTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAG---------------------------------------  219
            .||||||||||||||||.||||||||||||||..|                                       
Sbjct  367  ATTGGCCAGGCTGGTCTTGAACTCCTGACCTCGTGATCCGCCCACCTCAGCCTCCCAAAGTGCTGGGATTACAA  440

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct  441  GTGTGAGCCACCGCGCCCGGCCAGGAAAGTTTTAAGGAGAGTCACCACCAGCTTTGTAACCAGTCTGGGTGTTT  514

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct  515  TCCACTCAGATTCTTCTAACAGAGAAAATGCCATTGAGGATGAAGAGGAGGAGGAGGAGGAAGATGATGATGAG  588

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct  589  GAAGAAGACGACTTGGAAGTTAAGGAAGAAAATGGAGTCTTGGTCCTAAATGATGCAAACTTTGATAATTTTGT  662

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct  663  GGCTGACAAAGACACAGTGCTGCTGGAGTTTTATGCTCCATGGTGTGGACATTGCAAGCAGTTTGCTCCGGAAT  736

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct  737  ATGAAAAAATTGCCAACATATTAAAGGATAAAGATCCTCCCATTCCTGTTGCCAAGATCGATGCAACCTCAGCG  810

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct  811  TCTGTGCTGGCCAGCAGGTTTGATGTGAGTGGCTACCCCACCATCAAGATCCTTAAGAAGGGGCAGGCTGTAGA  884

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct  885  CTACGAGGGCTCCAGAACCCAGGAAGAAATTGTTGCCAAGGTCAGAGAAGTCTCCCAGCCCGACTGGACGCCTC  958

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct  959  CACCAGAAGTCACGCTTGTGTTGACCAAAGAGAACTTTGATGAAGTTGTGAATGATGCAGATATCATTCTGGTG  1032

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1033  GAGTTTTATGCCCCATGGTGTGGACACTGCAAGAAACTTGCCCCCGAGTATGAGAAGGCCGCCAAGGAGCTCAG  1106

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1107  CAAGCGTTCTCCTCCAATTCCCCTGGCAAAGGTCGACGCCACCGCAGAAACAGACCTGGCCAAGAGGTTTGATG  1180

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1181  TCTCTGGCTATCCCACCCTGAAAATTTTCCGCAAAGGAAGGCCTTATGACTACAACGGCCCACGAGAAAAATAT  1254

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1255  GGAATCGTTGATTACATGATCGAGCAGTCCGGGCCTCCCTCCAAGGAGATTCTGACCCTGAAGCAGGTCCAGGA  1328

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1329  GTTCCTGAAGGATGGAGACGATGTCATCATCATCGGGGTCTTTAAGGGGGAGAGTGACCCAGCCTACCAGCAAT  1402

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1403  ACCAGGATGCCGCTAACAACCTGAGAGAAGATTACAAATTTCACCACACTTTCAGCACAGAAATAGCAAAGTTC  1476

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1477  TTGAAAGTCTCCCAGGGGCAGTTGGTTGTAATGCAGCCTGAGAAATTCCAGTCCAAGTATGAGCCCCGGAGCCA  1550

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1551  CATGATGGACGTCCAGGGCTCCACCCAGGACTCGGCCATCAAGGACTTCGTGCTGAAGTACGCCCTGCCCCTGG  1624

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1625  TTGGCCACCGCAAGGTGTCAAACGATGCTAAGCGCTACACCAGGCGCCCCCTGGTGGTCGTCTACTACAGTGTG  1698

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1699  GACTTCAGCTTTGATTACAGAGCTGCAACTCAGTTTTGGCGGAGCAAAGTCCTAGAGGTGGCCAAGGACTTCCC  1772

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1773  TGAGTACACCTTTGCCATTGCGGACGAAGAGGACTATGCTGGGGAGGTGAAGGACCTGGGGCTCAGCGAGAGTG  1846

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1847  GGGAGGATGTCAATGCCGCCATCCTGGACGAGAGTGGGAAGAAGTTCGCCATGGAGCCAGAGGAGTTTGACTCT  1920

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1921  GACACCCTCCGCGAGTTTGTCACTGCTTTCAAAAAAGGAAAACTGAAGCCAGTCATCAAATCCCAGCCAGTGCC  1994

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 1995  CAAGAACAACAAGGGACCCGTCAAGGTCGTGGTGGGAAAGACCTTTGACTCCATTGTGATGGACCCCAAGAAGG  2068

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2069  ACGTCCTCATCGAGTTCTACGCGCCATGGTGCGGGCACTGCAAGCAGCTAGAGCCCGTGTACAACAGCCTGGCC  2142

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2143  AAGAAGTACAAGGGCCAAAAGGGCCTGGTCATCGCCAAGATGGACGCCACTGCCAACGACGTCCCCAGCGACCG  2216

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2217  CTATAAGGTGGAGGGCTTCCCCACCATCTACTTCGCCCCCAGTGGGGACAAAAAGAACCCAGTTAAATTTGAGG  2290

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2291  GTGGAGACAGAGATCTGGAGCATTTGAGCAAGTTTATAGAAGAACATGCCACAAAACTGAGCAGGACCAAGGAA  2364

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2365  GAGCTTTGAAGGCCTGAGGTCTGCGGAAGGTGGGAGGAGGCAGACGCCCTGCGTGGCCCATGGTCGGGGCGTCC  2438

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2439  ACGCCGAGGCCGGCAACAAACGACAGTATCTCGGATTCCTTTTTTTTTTTTTTTAATTTTTTATACTTTGGTGT  2512

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2513  TTCACTTCATGCTCTGAATACTGAATAACCATGAATGACTGAATAGTTTAGTCCAGATTTTTACAGAGGATACA  2586

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2587  TCTATTTTTATCATTATTTGGGGTTTGAAAAATTTTTTTTTACACCTTCTAATTTCTTTATTTCTCAAAGCAGA  2660

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2661  TAATTCTTCTGTGTGAAAATGTTTTCTTTTTTTAATTTAAGGTTTAAAATTCCTTTTCCAAATCATGTTGATTT  2734

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2735  TGCTCTTTGCTTTTTCGTTGTCTGAGAAATTGTTGGCGTAGATTTGGCTTCTGGTATGTGTTTCTGATTGCTTC  2808

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2809  CTGTTGAGCACAAAGTGAGAGCTGCCACTGAGCAGCCCTGCCAGGGGTGCTGTTTCAGGCTGGGCATCGCCAGG  2882

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2883  CGGCCTCCCTGCAAACCAAGGGCTGGGGGCAAAGGGGCATGATCCAGGGTCCCCCAGGGTGGGCTCAGCTCCAG  2956

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2957  GGAGAGGCCACCCACGTGGCAGCCCCACCTCTTGAGAGCCCCCAGTGCCGGAGCAGAAAGGACCCTGGACCCAG  3030

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3031  AGGCAGATACTGCGGGGTGGTAGAAAAGGTAGAGTAGGCTGTGGCAATGGAATAAAACACGATTAAAAACGTTA  3104

Query  220  ------------  219
                        
Sbjct 3105  AGAACTGCGTTA  3116

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