Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_12783
Subject:
XR_001753371.1
Aligned Length:
4204
Identities:
192
Gaps:
3985

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATAGGTGTTGGTGCAGAACGGTTAAGAAGGCTCCTTCTGTACCAGAAGTGAGGCCCAAGTAGGAGCTTATTCTG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  AGTCAGTGGAAATCGTGCAGACCTTCCAGAAGGGAATGATGTAATTGGAAAGCATTTTTGGATACTGCACGGCA  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GTCGTTTGAAGAAAAAACTGGAGAGATGGGGGATGGAAGCCTGGGAGTCACATTTTTTCAAGCAAGACATCACA  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  GAGGGTGAGGCCCAGTGACAGAGATGACAGATATTCAAAGATGGAATGAAAGAGGTTTGGTGACTGGATATAAG  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  CAACGAAACAGGAAGAATTGAATTTGGGTCTGATATTTCCTGGATGCAAGATCAGGAGGATGTTGGCACCATGG  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  CTTAGTGGGGAAACTGGGGACCGATTCTGGAGGTATACCAGCATGGTGAGTTTGGTTTTAGATGGGTTGTGTTT  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  GACATAGGGCTAGCAATTCTAAGTGAAGATGTCTAAAGAAAGATAGAAGTGACTCAGCTCTGAAGTTCTGAAAT  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  GATCAGCCATCAGCGTGGCATGAGGAAGACCTAGGAACAGACAGACTGGGGAGAAGACACAGAGCCAAGCAGGA  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  CCTGGCCTGCAGCCCAAACCCTGTGGAATCCCTACATTCAAGGACCAGGTTGAAGTGAAGCCATTGACAGGAAC  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  TGAGATGCAGTAGTGTTCTGGAAGTCAAGTGAGGAGGAGGATTGAAGAAGAGGTTGGTCAAAATTCTGGGGGTT  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  GCCCAGTGGAAACACCAGACTGCAAAGCTTTGAGAAGTCTGTATGAGATGAACAACTGGAAAAGGTTCTTCGTG  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  AAGAATTTGTGTGGTGAAGAGCTGGAATAGCGGCTTGAGGGAGAGAAGCCAGATGGAGTCTCACTCTGTCGCCC  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  AGGCTGGAGTACAGTGGTGTGATCCGGGCTGACTGCAAGCTCTGCCTCCCGAGTTCACACCATTCTCCTGCCTC  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  AGTCTCCCGAATAGCTGGGACTACAGGCTCCCACCACCACACCCGGCTAATTTTTTGTACGTTTTTTTTTTTTT  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  AGTAGAGACAGAGTTTCACCGTGTTAGCCAGGATGGTCTTGATCTCCTGACATTGTGATCCACCCGCCTTGGTC  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  TCACAAAGTGCTGGGATTACAGGCGTGAGCCACCGCACCTGGCCATGTTGATTTGTTTTAATGGTAGTTGCAAT  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  ACTTGTGAGAGTGACATCCACCTGGATGCTGACTTGAATGGAATTTCATAACTGTTGGGTACTGACCATGAGTT  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  GGTGTGGGGACATACAAAGTTGAACAAGACATAGGCTTGCCTCATAGTGTCTACAGCCTGGAAGAGGGAAGAAA  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  GTGACAACACAAATAGTTCTGCATCTTATGAATTCATGGGAAGAGGAGAGGTGTCATAAGACAGAAAACCAGAA  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  GTTTTGGCAACCGTATGCTGATTCTGCCATCTCCAGCCTGATTCCTTGGGAGAGGTTAACCTTCCACAGTGGTG  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  GCAAAAGTCAGCAGGCAATGAAGGCTATTTCCACCTGAGTCACCAGAAAGAATGGCTAGGTCATAAGCCACATG  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  GCTGGACTCTATCTACCTCCCTGTAATCTCCACTCTTTCACCTGTGCCAGCAATGGTTTAGAGATGAACAGACC  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  ATAAAGACTATGGAAATCCAATAATCTTTAATGCATTTGCTCTGTCAGTGACATTTGCCATAGGAGAGAGAGAG  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  ATTTGGAATTTATAATTTGTACACCCTGATTCTGCACAGCCTTAGTCTCTGACAATGTGTGAATGCATATTTGG  1776

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1777  AAGGGACACATTCTCCCAGTTTACTGCAATATCCTCGCTCCCTATTAATTACACCCAGTGATTAAGCCCACAAT  1850

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1851  GCCTTTTAAATTTTCCCAGCAAGCCTTGTACAACAATCCAAATCAGGCCAAAAGTAGGAGGAGAGCTATTTTCT  1924

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1925  TCCTGCCTGCTTTCCCTCTGAGCATACAAATTTGGAGGCCCCATAACAACTGCTCCCCTCTTCATGCTGGCAGA  1998

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1999  GCCTAATTATTTCTCAACTTATCCCTAAACAAAGAATAGATCACCAAAATACTTCAGATGAAACGTAGAGCAGA  2072

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2073  CAGGTCCTGGGCTGGGAATCCAGGAGACTGATGCAACAAATGCAACAAAGAGCATTAAGAGACTAGCAATGTCC  2146

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2147  ATGAAGAAGGGAACCTAATAAGTAAGCTGCCACAGCTCAAGTCCTCCTGGCCAAAGCCAGGTCATGTCCCTCTA  2220

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2221  TAACCAGCCAGTGAGAAGGGAATGAGGTCCCTAAACGGGTTCGGGGGATTCATGATTCTCTCTGGGGACTGGAG  2294

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2295  AGAGAGCCTGGAGGTCTCACTTTCTTGAGCACATCGGGGTGACTGATGGACCCTGCCGGGTGGTCAAGGTGAGA  2368

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2369  TGGCTTCTGGCACAGGTATTGGATGTGACATAATCCTTGCGAAGGGCCTAGACAGTTAAGGAAGTGCACCCTAC  2442

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2443  CTCCTGAAAGCTCCCTCCATACCTGGCACTAAAAGGTATTATCACCAGTTCAGATATTTTGATATATATGGTTC  2516

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2517  GCTTCTGTCTGATGACTCCCTGCAAAAAGGCTACCCTCCAAGCTACCCTCTAGGGTGAGTCATTAGACAGAACA  2590

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2591  AGGATATAACACATCCCCTGCTCTCCTAAGGAAATTCTCTCAGTGTGAATTTTCTTGTGCTGAATGAACAAAGA  2664

Query    1  ------------------------ATGG-------------AGTCTCATTCTGTCGCCCAGACTGGAGTGAAGT  37
                                    .|||             |||||||.||||||.|||||.||||||||.|||
Sbjct 2665  TTTTTTTTTGTTTGTTTGTTTTTTTTGGTTTGTTTTTAGACAGTCTCAGTCTGTCACCCAGGCTGGAGTGCAGT  2738

Query   38  GGCATGATCTCGGCTCACTGCAACCTCTGCCTCTCGAGGTCAAGCGATTCTCCTGCCTCGGCCTCCGGAGTAGC  111
            ||||.|||||.||||.||||||||||||||||||.|.|.|||||.||||||..||||||.||||||.|||||||
Sbjct 2739  GGCACGATCTTGGCTTACTGCAACCTCTGCCTCTGGGGTTCAAGTGATTCTTGTGCCTCAGCCTCCCGAGTAGC  2812

Query  112  TGGGATTACAGGCACACGCAACCATGCCCGGCTAA-----TTTTTTTTGTATTTTTAGTAGAGATGGGGTTTCA  180
            |||||||||||||||..||.||||.||||.|||||     ||||||||||||||||.|||||||||||||||..
Sbjct 2813  TGGGATTACAGGCACCTGCCACCACGCCCAGCTAATTTTTTTTTTTTTGTATTTTTTGTAGAGATGGGGTTTTG  2886

Query  181  CCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAG-----------------------------------  219
            |||||||||.|||||||||||.||||.||||||||||||                                   
Sbjct 2887  CCATGTTGGTCAGGCTGGTCTTGAACCCCTGACCTCAAGTGATCCTCCCGCCTTGGCCTCCCAGAGTGCTGGGA  2960

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 2961  TTACAGACATGAGCCACTGCGCCTGGCCTCAATGAGTAAATGTTTTGCTAAAAAATTTCCCACACTGCCTCAGC  3034

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3035  ATAAAGCCTTACTTCAGTGTCAACTTTTGGTGCTGAACAAGGCACTCCTTGGCTGAAACCTTCCCACATTCTAT  3108

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3109  GCATTCATAAGGCTTTTGCAGGGTGAACTTTCTGGTGCTGAGCAAGGTTAGAGGGACAGCCAAAGGCTCTCTCA  3182

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3183  CATTGTCCCCACTCATAAAACCTTTCTGTGTTGTGAACTTTCTGGTGCCCTGCAAGGTGGACATTTCTGCTGTA  3256

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3257  GGATTTCCCACACCTGCTGTACACATAAGGGCTTGCTCCAGAGTGAAGTCTCTGGTGGTGAACAAGGCTGGAGC  3330

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3331  TCTGGCTAAAGGATTTCCCACATTCTTTGCACTCATAAGGACTTTCTCCAATATGGGTTCTTTGATGTTGACCA  3404

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3405  AGTCCATATTTGGAGCTCAAAGATTTCTTACGCAATGTAAATTAGTATAACCACTATGGAGAACAGTTTGGAGG  3478

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3479  TTCCTCAAAAAACTAAAAATAGAGCTACCATATGACCCATCAATCTGACTTCTAGTTATATACCCCAAAGAAAA  3552

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3553  GAAATCAGTACATTGAAGAGATATCTGCCCTCCCATCTTTGTTGCAGCACTATTCACAATAGCCAAGATTTGGA  3626

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3627  AGTAACCCAAATGTCCATCAACAGACAAATGGATAAAGAAAATGTGGTGCATATACACAATGGAGTAGTATTCA  3700

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3701  GCCATAAAAAAGAATGAGATCTTGTCATCTGCAACAACATGGATGGAACTGGAGGTCCTTAAGGTTAAGCAAAA  3774

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3775  TAATCCAGGCACAGAAAGAAAACATTGCATGTTCTCATCTATTTGTGAGAACTAAAAATTAAAACAATTGAACT  3848

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3849  CATGGAGATAGAGAGTAGAAGGATGGTTACCAGAGGCTGGGAAGGGTAGTGAGGGCGAGTGAGGGGGAAGTGGG  3922

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3923  GTGTTTAATGTGTCCAAAAAATGGTCAGAAACAATGAATAAAGTCTAATATATGACAGCAAAAGAGTGTGACTA  3996

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 3997  TAGTCAATAATAATCGAATGGTACATTTAAAAATAACTAAAAGTGTATATTTGGATTGTTTGTAACATAAAGGA  4070

Query  220  --------------------------------------------------------------------------  219
                                                                                      
Sbjct 4071  TAAATGCTTGAGGTGATGGATACCCCATTTACCCTGATGTGATTGTTACACATTGTATGCCTGTATCAAAGTAT  4144

Query  220  ------------------------------------------------------------  219
                                                                        
Sbjct 4145  CCATATACCCCATGAATAAATGTATATACCTACTATGCACCTACAAAAATTAAAATAATA  4204

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