Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_12783
- Subject:
- XR_002957252.1
- Aligned Length:
- 2670
- Identities:
- 187
- Gaps:
- 2462
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 TGCACGCCGCGCGGAGGACGAAGAGGCTGCACGCACAGCCGCTGCCGGGGGTCGGGGCCAAGTGCGCGCCTCGC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CGAGGACGAAGAGGCTGGCGTGCCCGGTGGCTCGGCTAGCTCCCGGGTCCCGGCCCCGCCTGGAGGATGCGGCT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GTGGGGGAATGGGAGCGGCCGGACCTCCCAGCCTGACAGTGCATCAAGAGCTTTGCGGAGCCTACAGCCCGGAT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GGGACGACTGAGGCCCTCCCGCTGGCGAGCTGGCCGAGGGCTCGTCCCTCTCCAGCTAAAGCGCCAGCTTACGA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TACAGCCAAACTGCCGGCTCTCATCGGCTGTGGGAGCAGGAGGCCCCCAGGGGTAAATCCCGGAGCCTCGTCTC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TGAAGCCTGGCGCTTGTGTCTCAGAAGGTGCGGGACCCACAGGGACACTTGAATCAGCAGGCTCACGACCCCCC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 ACCCCCCTGCCCCCGCCTGTGTTTGCCCTGGACCTCCAGCTAGGGCTGACCACTAATTCTGTCATGTGACCCCA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CAGTGCAGGTAGCTCCCCCAAGACCAAGCCCAAGGCGCGTCCGTGTGGAGGCTGGGGCTGACGCACCCCCACCC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CAGGCCTCATCCCCAAAGGAGGATGCTCCACTGCAGGGGGCGGAGTCTTCTCCAGATGGAGAAAGACTTTTTTA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TTTTCTCTGAATTCGTCTTAAATTAGGAAATCATGTGGGAATTGGAAAAGATTGGAAATTCTGACTTGTTTCCC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 AGGCTCTGAAGAAACAGGAAGAGAAAAGTGAAAATAGAGTTAGCACCCCGCCCACTCATTTCAGTTTCTCCAGT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GGCTGGCCCTGATTAGAAAAGTGTTTACTTTTGGCAGGGGGCGGGGGAGGCCGACTTCAGGTGACAGAATGGAT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TAATTAAAATCTTTGGTTAATGATATACAATTATCATTGAACCTTGCATGGATCCTCTTCTTAAAATTCATGTA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TATTTATAACTTTTAAATTAATACGATAAACACCCATGTACCCATTGCAAAACTCAAGGGGCCACCACCATCCA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 GAATTCTGTATTGTATTGTATTGTATTGTATTGTATTGTATTGTATTGTATTGTATTTATTTATTTATTTATTT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 TTTGAGACACGGTCTGTCTCTGTCGCCCAGGCTGGAGTGCAGTGGCACAATCTCTGCTCACTGCAGCCTCTACC 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 TCCTGGGCTCAAGCAATCCTCCCACTTCAGCCTCTTGCATAGCTGGGACTACGGGAGCACACCACCATGCCCGG 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 CTAAGTTTTTGTATTTTTTGTAAAGAAGTGGTTTAACCTTGTTGTCCAGGCTAGTCTTGAACTCCTGAGCTCAA 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 CTTTCCTCCCCGCTTGGCCTCACAAAGTGCTGGGATTACAGGCGTGAGCCACCACGCTGGGCCAGAATTCTGTA 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 TTTTTTAAATTAATTAATTAATTAATTTATTGTAAATAGAGATGGGTCTCACTGTGTTGCCCAGGCTGGTCTCA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 AACTCCTGGGCTCAAGCGATCCTCCCACCTCAGCCTCCCAAAGTGGGATTACAGGCATGAGCCACCACACCTGG 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 CCCAGAATTCTGTATTTTAAAGAAAAAAAAAGTTATATCTGCATGCCTACACAATATATCTTTTGGTTTTCCTT 1628
Query 1 ----------------------------------ATGGAGTCTCATTCTGTCGCCCAGACTGGAGTGAAGTGGC 40
| |||||||.||||||||.|||.|||||.||.||||||
Sbjct 1629 AGTTTTGAACTTTTTTTTTTTTTTTTTTGAGACAA---AGTCTCACTCTGTCGCGCAGGCTGGAATGCAGTGGC 1699
Query 41 ATGATCTCGGCTCACTGCAACCTCTGCCTCTCGAGG-TCAAGCGATTCTCCTGCCTCGGCCTCCGGAGTAGCTG 113
|| ||.|||.||||||||||||||||| |.||| ||||||||||||||||||||.||||||.|||||||||
Sbjct 1700 AT----TCTGCTTACTGCAACCTCTGCCTC-CTAGGTTCAAGCGATTCTCCTGCCTCAGCCTCCTGAGTAGCTG 1768
Query 114 GGATTACAGGCACACGCAACCATGCCCGGCTAATTTTTTTTGTA--TTTTTAGTAGAGATGGGGTTTCACCATG 185
||||||.|||..|...|.||||.||||.||||| |||||||| |||||||||||||.||||||||||||||
Sbjct 1769 GGATTAAAGGGGCCAACCACCACGCCCAGCTAA---TTTTTGTATTTTTTTAGTAGAGACGGGGTTTCACCATG 1839
Query 186 TTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAG---------------------------------------- 219
||||||||||||||||||||||||||||||||.|
Sbjct 1840 TTGGCCAGGCTGGTCTCGAACTCCTGACCTCAGGTGATTCGCCAGCCTCTGCCTCCCAAAGTGCTGAGATTACA 1913
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1914 GGTGTGAGCCACCGCACCCAGCCAGTTTTGAACTTTTATGAAGAGGGCATCATATGATTTGTTGTCCTTTGTTA 1987
Query 220 -------------------------------------------------------------------------- 219
Sbjct 1988 CTTGCTTTTTTCACTCAACCTGTTACTATGATTCATGTTTCACAGTTAATTCACTTTTTCACTGCTGTATACTA 2061
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2062 TTTTGTTGTGTAAATATACCACAGTTTGTTTATTCATCCTGAAGATAGGCATTTTTATTTTTATTTTTTTGAGA 2135
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2136 TGGAGTTCCTCTCTTGTGGCCCAGGCTGGAGTGCAATAGCACCATCTCGGCTCACTGCAACCTCTGCCTCCCAG 2209
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2210 GTTCAAGTGATTCTCCTGCCTTAGCCTCCTGAGTAGCTAGGATTACAGATTTATAGGAGCATTGTGACTGGACC 2283
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2284 AAGGACAAAGAAGTTCCCAACCTCCTCAGACCCTCGCTGCTGCCCAGATGTCTGCCATGGGGTGGCCATCATCG 2357
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2358 AATCCACTGAGGGCGCAAATAGAACAAAAAGGTGAAGAAAAGGTGAATTCTCTCCTTTCTTGAGCTGGGACATC 2431
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2432 CAACTTCTCAGACATCAGAGCTCCTGGAGGCCTTCAGACTCCGAGACATTACACCATTGGCTCACCTGGTCCTC 2505
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2506 AGGTCTTTGGACTTGGAATGAATTACACCATTGGCTTTCCAGGTCTTCCAGCTTGCAGATGGCAGATTGTGGGA 2579
Query 220 -------------------------------------------------------------------------- 219
Sbjct 2580 CTTTTCAGCCTCCATAACTTTGTCATCCAATTCCCATAATAAATCGCCTCTTATATCTGTATCTGTTTGGTTCT 2653
Query 220 ------ 219
Sbjct 2654 GTTCTG 2659
