Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_12789
- Subject:
- NM_001289120.1
- Aligned Length:
- 1629
- Identities:
- 932
- Gaps:
- 696
Alignment
Query 1 ATGATGTTTGGTGGCTATGAGACTATAGAAGCATACGAAGATGATCTTTATCGAGATGAGTCATCTAGTGAACT 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGATGTTTGGTGGCTATGAGACTATAGAAGCATACGAAGATGATCTTTATCGAGATGAGTCATCTAGTGAACT 74
Query 75 GAGTGTTGATAGTGAGGTGGAATTTCAACTCTATAGCCAAATTCATTATGCCCAAGATCTTGATGATGTCATCA 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 GAGTGTTGATAGTGAGGTGGAATTTCAACTCTATAGCCAAATTCATTATGCCCAAGATCTTGATGATGTCATCA 148
Query 149 GGGAGGAAGAGCATGAAGAAAAGAACTCTGGGAATTCGGAATCTTCGAGTAGTAAACCAAATCAGAAGAAGCTA 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 GGGAGGAAGAGCATGAAGAAAAGAACTCTGGGAATTCGGAATCTTCGAGTAGTAAACCAAATCAGAAGAAGCTA 222
Query 223 GTCGTCCTTTCAGATAGTGAGGTCATCCAGCTGTCAGATGGGTCAGAGGTCATCACTTTGTCTGATGAAGACAG 296
.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 ATCGTCCTTTCAGATAGTGAGGTCATCCAGCTGTCAGATGGGTCAGAGGTCATCACTTTGTCTGATGAAGACAG 296
Query 297 TATTTATAGATGTAAAGGAAAGAATGTTAGAGTTCAAGCACAAGAAAATGCCCATGGTCTTTCTTCTTCTCTTC 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 TATTTATAGATGTAAAGGAAAGAATGTTAGAGTTCAAGCACAAGAAAATGCCCATGGTCTTTCTTCTTCTCTTC 370
Query 371 AATCTAATGAGCTGGTTGATAAGAAATGCAAGAGTGATATTGAGAAGCCTAAATCTGAAGAGAGATCAGGTGTA 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 AATCTAATGAGCTGGTTGATAAGAAATGCAAGAGTGATATTGAGAAGCCTAAATCTGAAGAGAGATCAGGTGTA 444
Query 445 ATCCGAGAGGTCATGATTATAGAGGTCAGTTCAAGTGAAGAGGAAGAGAGCACCATTTCAGAAGGTGATAATGT 518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 ATCCGAGAGGTCATGATTATAGAGGTCAGTTCAAGTGAAGAGGAAGAGAGCACCATTTCAGAAGGTGATAATGT 518
Query 519 GGAAAGCTGGATGCTACTGGGATGTGAAGTAGATGATAAAGATGATGATATCCTTCTCAACCTTGTGGGATGTG 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 GGAAAGCTGGATGCTACTGGGATGTGAAGTAGATGATAAAGATGATGATATCCTTCTCAACCTTGTGGGATGTG 592
Query 593 AAAACTCTGTTACTGAAGGAGAAGATGGTATAAACTGGTCCATCAGTGACAAAGACATTGAGGCCCAGATAGCT 666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 AAAACTCTGTTACTGAAGGAGAAGATGGTATAAACTGGTCCATCAGTGACAAAGACATTGAGGCCCAGATAGCT 666
Query 667 AATAACCGAACACCTGGAAGATGGA-CCAGCGGTACTATTCAGCCAACAAAAACATTATCTGTAGAAATTGTGA 739
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 AATAACCGAACACCTGGAAGATGGACCCAGCGGTACTATTCAGCCAACAAAAACATTATCTGTAGAAATTGTGA 740
Query 740 CAAACGTGGTCATTTATCAAAAAACTGCCCCTTACCACGAAAAGTTCGTCGCTGCTTCCTGTGCTCCAGGAGAG 813
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 CAAACGTGGTCATTTATCAAAAAACTGCCCCTTACCACGAAAAGTTCGTCGCTGCTTCCTGTGCTCCAGGAGAG 814
Query 814 GACATCTCCTGTATTCCTGTCCAGCCCCCCTTTGCGAATACTGTCCTGTGCCTAAGATGTTGGACCACTCATGT 887
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 GACATCTCCTGTATTCCTGTCCAGCCCCCCTTTGCGAATACTGTCCTGTGCCTAAGATGTTGGACCACTCATGT 888
Query 888 CTTTTCAGACATTCCTGGGATAAACAGTGTGACCGATGTCATATGC---------------------------- 933
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 CTTTTCAGACATTCCTGGGATAAACAGTGTGACCGATGTCATATGCTAGGCCACTATACAGATGCTTGCACAGA 962
Query 934 -------------------------------------------------------------------------- 933
Sbjct 963 AATCTGGAGGCAGTATCACCTAACGACCAAACCTGGACCACCCAAAAAGCCGAAGACCCCTTCAAGACCATCAG 1036
Query 934 -------------------------------------------------------------------------- 933
Sbjct 1037 CCTTAGCATATTGCTATCACTGCGCGCAAAAAGGCCATTATGGACACGAATGTCCAGAAAGAGAAGTGTATGAC 1110
Query 934 -------------------------------------------------------------------------- 933
Sbjct 1111 CCGTCTCCAGTATCTCCATTCATCTGCTACTATGATGACAAATATGAAATTCAGGAGAGAGAAAAGAGACTAAA 1184
Query 934 -------------------------------------------------------------------------- 933
Sbjct 1185 ACAAAAAATAAAAGTACTCAAGAAAAATGGGGTTATCCCAGAGCCATCCAAGCTACCTTATATAAAAGCAGCAA 1258
Query 934 -------------------------------------------------------------------------- 933
Sbjct 1259 ATGAGAACCCCCACCATGATATAAGGAAGGGCCGTGCCTCATGGAAAAGCAACAGGTGGCCTCAAGAAAATAAA 1332
Query 934 -------------------------------------------------------------------------- 933
Sbjct 1333 GAAACACAAAAAGAAATGAAGAACAAGAATAGAAACTGGGAGAAGCACAGGAAGGCTGACAGACATCGTGAAGT 1406
Query 934 -------------------------------------------------------------------------- 933
Sbjct 1407 GGATGAGGATTTTCCCAGGGGCCCCAAAACCTACTCTTCTCCTGGCAGTTTTAAAACCCAGAAGCCTTCTAAGC 1480
Query 934 -------------------------------------------------------------------------- 933
Sbjct 1481 CCTTTCACCGTTCATCACATTACCACACGTCAAGAGAAGACAAGTCTCCCAAGGAAGGCAAGAGGGGCAAGCAG 1554
Query 934 -------------------------------------------------------------------------- 933
Sbjct 1555 AAGAAAAAGGAGAGGTGCTGGGAAGATGATGACAATGATAACTTATTTCTTATTAAGCAGAGAAAAAAAAAGTC 1628
Query 934 - 933
Sbjct 1629 T 1629
