Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_12794
- Subject:
- NM_001304284.2
- Aligned Length:
- 4221
- Identities:
- 760
- Gaps:
- 3351
Alignment
Query 1 ATGGACGTGGTAGAGGTCGCGGGCAGTTGGTGGGCACAAGAGCGAGAGGACATCATTATGAAATACGAAAAGGG 74
||||||.||||||||...||.|..||||.|..||||||.|||||..|||||||..|||||||.||.||.|||||
Sbjct 1 ATGGACATGGTAGAGAATGCAGATAGTTTGCAGGCACAGGAGCGGAAGGACATACTTATGAAGTATGACAAGGG 74
Query 75 ACACCGAGCTGGGCTGCCAGAGGACAAGGGGCCTAAGCCTTTTCGAAGCTACAACAACAACGTCGATCATTTGG 148
||||||||||||||||||||||||||||||||||.||||..||.||| .|||||.||.|.|.||||.|||.|
Sbjct 75 ACACCGAGCTGGGCTGCCAGAGGACAAGGGGCCTGAGCCCGTTGGAA---TCAACAGCAGCATTGATCGTTTTG 145
Query 149 GGATTGTACATGAGACGGAGCTGCCTCCTCTGACTGCGCGGGAGGCGAAGCAAATTCGGCGGGAGATCAGCCGA 222
|.|||.|.|||||||||||||||||||||.|||||||.||||||||||||.||||||||||||||||.|..|||
Sbjct 146 GCATTTTGCATGAGACGGAGCTGCCTCCTGTGACTGCACGGGAGGCGAAGAAAATTCGGCGGGAGATGACACGA 219
Query 223 AAGAGCAAGTGGGTGGATATGCTGGGAGACTGGGAGAAATACAAAAGCAGCAGAAAGCTCATAGATCGAGCGTA 296
|.||||||||||.||||.|||||||||||.|||||||.|||.||...|||.||.||.|||||||||||||.|||
Sbjct 220 ACGAGCAAGTGGATGGAAATGCTGGGAGAATGGGAGACATATAAGCACAGTAGCAAACTCATAGATCGAGTGTA 293
Query 297 CAAGGGAATGCCCATGAACATCCGGGGCCCGATGTGGTCAGTCCTCCTGAACACTGAGGAAATGAAGATGAAAA 370
|||||||||.|||||||||||||||||||||.|||||||||||||||||||||.|.|||||||.|||.||||||
Sbjct 294 CAAGGGAATTCCCATGAACATCCGGGGCCCGGTGTGGTCAGTCCTCCTGAACATTCAGGAAATCAAGTTGAAAA 367
Query 371 ACCCCGGAAGATACCAGATCATGAAGGAGAAGGGCAAGAGGTCATCTGAGCACATCCAGCGCATCGACCGGGAC 444
||||||||||||||||||||||||||||||.||||||||||||||||||.||||||||.|.||||||||.||||
Sbjct 368 ACCCCGGAAGATACCAGATCATGAAGGAGAGGGGCAAGAGGTCATCTGAACACATCCACCACATCGACCTGGAC 441
Query 445 GTAAGCGGGACATTAAGGAAGCATATATTCTTCAGGGATCGATACGGAACCAAGCAGCGGGAACTACTCCACAT 518
||.||...|||..|..||||.|||.|.|||||.|||||||||||.|||.||||||||.||||||||.||.||||
Sbjct 442 GTGAGGACGACTCTCCGGAACCATGTCTTCTTTAGGGATCGATATGGAGCCAAGCAGAGGGAACTATTCTACAT 515
Query 519 CCTCCTGGCATATGAGGAGTATAACCCGGAGGTGGGCTACTGCAGGGACCTGAGCCACATCGCCGCCTTGTTCC 592
|||||||||.|||..||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||
Sbjct 516 CCTCCTGGCCTATTCGGAGTATAACCCGGAGGTGGGCTACTGCAGGGACCTGAGCCACATCACCGCCTTGTTCC 589
Query 593 TCCTCTATCTTCCTGAGGAGGATGCATTCTGGGCACTGGTGCAGCTGCTGGCCAGTGAGAGGCACTCCCTGCAG 666
||||.|||||.|||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||..
Sbjct 590 TCCTTTATCTGCCTGAGGAGGACGCATTCTGGGCACTGGTGCAGCTGCTGGCCAGTGAGAGGCACTCCCTGCCA 663
Query 667 GGATTTCACAGCCCAAATGGCGGGACCGTCCAGGGGCTCCAAGACCAACAGGAGCATGTGGTAGCCACGTCACA 740
|||||.||||||||||||||.|||||.||||||||||||||||||||||||||||||||||||.|||.||||||
Sbjct 664 GGATTCCACAGCCCAAATGGTGGGACAGTCCAGGGGCTCCAAGACCAACAGGAGCATGTGGTACCCAAGTCACA 737
Query 741 ACCCAAGACCATGGGGCATCAG---------------------------------------------------- 762
|||||||||||||.||||||||
Sbjct 738 ACCCAAGACCATGTGGCATCAGGACAAGGAAGGTCTATGCGGGCAGTGTGCCTCGTTAGGCTGCCTTCTCCGGA 811
Query 763 -------------------------------------------------------------------------- 762
Sbjct 812 ACCTGATTGACGGGATCTCTCTCGGGCTCACCCTGCGCCTGTGGGACGTGTATTTGGTGGAAGGAGAACAGGTG 885
Query 763 ----------------------------------------AGCGCCTCACGAAGACGTCCAGGTGTGGCCCGTG 796
|||||||||.||||||.|||||||||||||.|||
Sbjct 886 TTGATGCCAATAACCAGCATTGCTCTTAAGGTTCAGCAGAAGCGCCTCATGAAGACATCCAGGTGTGGCCTGTG 959
Query 797 GGCACGTTTTTGCAACCGGTTCGTTGATACCTGGGCCAGGGATGAGGACACTGTGCTCAAGCATCTTAGGGCCT 870
|||||||.|..|.||||..|||.|.|||||||||||||.|.|.||.|||||.||||||||||||||||||||||
Sbjct 960 GGCACGTCTGCGGAACCAATTCTTCGATACCTGGGCCATGAACGATGACACCGTGCTCAAGCATCTTAGGGCCT 1033
Query 871 CTA----------------------------------------------------------------------- 873
|||
Sbjct 1034 CTACGAAGAAACTAACAAGGAAGCAAGGGGACCTGCCACCCCCAGCCAAACGCGAGCAAGGGTCCTTGGCACCC 1107
Query 874 -------------------------------------------------------------------------- 873
Sbjct 1108 AGGCCTGTGCCGGCTTCACGTGGTGGGAAGACCCTCTGCAAGGGGTATAGGCAGGCCCCTCCAGGCCCACCAGC 1181
Query 874 -------------------------------------------------------------------------- 873
Sbjct 1182 CCAGTTCCAGCGGCCCATTTGCTCAGCTTCCCCGCCATGGGCATCTCGTTTTTCCACGCCCTGTCCTGGTGGGG 1255
Query 874 -------------------------------------------------------------------------- 873
Sbjct 1256 CTGTCCGGGAAGACACGTACCCTGTGGGCACTCAGGGTGTGCCCAGCCTGGCCCTGGCTCAGGGAGGACCTCAG 1329
Query 874 -------------------------------------------------------------------------- 873
Sbjct 1330 GGTTCCTGGAGATTCCTGGAGTGGAAGTCAATGCCCCGGCTCCCAACGGACCTGGATATAGGGGGCCCTTGGTT 1403
Query 874 -------------------------------------------------------------------------- 873
Sbjct 1404 CCCCCATTATGATTTTGAATGGAGCTGCTGGGTCCGTGCCATATCCCAGGAGGACCAGCTGGCCACCTGCTGGC 1477
Query 874 -------------------------------------------------------------------------- 873
Sbjct 1478 AGGCTGAACACTGCGGAGAGGTTCACAACAAAGATATGAGTTGGCCTGAGGAGATGTCTTTTACAGCAAATAGT 1551
Query 874 -------------------------------------------------------------------------- 873
Sbjct 1552 AGTAAAATAGATAGACAAAAGGTTCCCACAGAAAAGGGAGCCACAGGTCTAAGCAACCTGGGAAACACATGCTT 1625
Query 874 -------------------------------------------------------------------------- 873
Sbjct 1626 CATGAACTCAAGCATCCAGTGCGTTAGTAACACACAGCCACTGACACAGTATTTTATCTCAGGGAGACATCTTT 1699
Query 874 -------------------------------------------------------------------------- 873
Sbjct 1700 ATGAACTCAACAGGACAAATCCCATTGGTATGAAGGGGCATATGGCTAAATGCTATGGTGATTTAGTGCAGGAA 1773
Query 874 -------------------------------------------------------------------------- 873
Sbjct 1774 CTCTGGAGTGGAACTCAGAAGAGTGTTGCCCCATTAAAGCTTCGGCGGACCATAGCAAAATATGCTCCCAAGTT 1847
Query 874 -------------------------------------------------------------------------- 873
Sbjct 1848 TGATGGGTTTCAGCAACAAGACTCCCAAGAACTTCTGGCTTTTCTCTTGGATGGTCTTCATGAAGATCTCAACC 1921
Query 874 -------------------------------------------------------------------------- 873
Sbjct 1922 GAGTCCATGAAAAGCCATATGTGGAACTGAAGGACAGTGATGGCCGACCAGACTGGGAAGTAGCTGCAGAGGCC 1995
Query 874 -------------------------------------------------------------------------- 873
Sbjct 1996 TGGGACAACCATCTAAGAAGAAATAGATCAATTATTGTGGATTTGTTCCATGGGCAGCTAAGATCTCAAGTCAA 2069
Query 874 -------------------------------------------------------------------------- 873
Sbjct 2070 ATGCAAGACATGTGGGCATATAAGTGTCCGATTTGACCCTTTCAATTTTTTGTCTTTGCCACTACCAATGGACA 2143
Query 874 -------------------------------------------------------------------------- 873
Sbjct 2144 GTTACATGGACTTAGAAATAACAGTGATTAAGTTAGATGGTACTACCCCTGTACGGTATGGACTAAGACTGAAT 2217
Query 874 -------------------------------------------------------------------------- 873
Sbjct 2218 ATGGATGAAAAGTACACAGGTTTAAAAAAACAGCTGAGGGATCTCTGTGGACTTAATTCAGAACAAATCCTACT 2291
Query 874 -------------------------------------------------------------------------- 873
Sbjct 2292 AGCAGAAGTACATGATTCCAACATAAAGAACTTTCCTCAGGATAACCAAAAAGTACAACTCTCAGTGAGCGGAT 2365
Query 874 -------------------------------------------------------------------------- 873
Sbjct 2366 TTTTGTGTGCATTTGAAATTCCTGTCCCTTCATCTCCAATTTCAGCTTCTAGTCCAACACAAATAGATTTCTCC 2439
Query 874 -------------------------------------------------------------------------- 873
Sbjct 2440 TCTTCACCATCTACAAATGGAATGTTCACCCTAACTACCAATGGGGACCTACCCAAACCAATATTCATCCCCAA 2513
Query 874 -------------------------------------------------------------------------- 873
Sbjct 2514 TGGAATGCCAAACACTGTTGTGCCATGTGGAACTGAGAAGAACTTCACAAATGGAATGGTTAATGGTCACATGC 2587
Query 874 -------------------------------------------------------------------------- 873
Sbjct 2588 CATCTCTTCCTGACAGCCCCTTTACAGGTTACATCATTGCAGTCCACCGAAAAATGATGAGGACAGAACTGTAT 2661
Query 874 -------------------------------------------------------------------------- 873
Sbjct 2662 TTCCTGTCACCTCAGGAGAATCGCCCCAGCCTCTTTGGAATGCCATTGATTGTTCCATGCACTGTGCATACCCG 2735
Query 874 -------------------------------------------------------------------------- 873
Sbjct 2736 GAAGAAAGACCTATATGATGCGGTTTGGATTCAAGTATCCTGGTTAGCAAGACCACTCCCACCTCAGGAAGCTA 2809
Query 874 -------------------------------------------------------------------------- 873
Sbjct 2810 GTATTCATGCCCAGGATCGTGATAACTGTATGGGCTATCAATATCCATTCACTCTACGAGTTGTGCAGAAAGAT 2883
Query 874 -------------------------------------------------------------------------- 873
Sbjct 2884 GGGAACTCCTGTGCTTGGTGCCCACAGTATAGATTTTGCAGAGGCTGTAAAATTGATTGTGGGGAAGACAGAGC 2957
Query 874 -------------------------------------------------------------------------- 873
Sbjct 2958 TTTCATTGGAAATGCCTATATTGCTGTGGATTGGCACCCCACAGCCCTTCACCTTCGCTATCAAACATCCCAGG 3031
Query 874 -------------------------------------------------------------------------- 873
Sbjct 3032 AAAGGGTTGTAGATAAGCATGAGAGTGTGGAGCAGAGTCGGCGAGCGCAAGCCGAGCCCATCAACCTGGACAGC 3105
Query 874 -------------------------------------------------------------------------- 873
Sbjct 3106 TGTCTCCGTGCTTTCACCAGTGAGGAAGAGCTAGGGGAAAGTGAGATGTACTACTGTTCCAAGTGTAAGACCCA 3179
Query 874 -------------------------------------------------------------------------- 873
Sbjct 3180 CTGCTTAGCAACAAAGAAGCTGGATCTCTGGAGGCTTCCACCCTTCCTGATTATTCACCTTAAGCGATTTCAAT 3253
Query 874 -------------------------------------------------------------------------- 873
Sbjct 3254 TTGTAAATGATCAGTGGATAAAATCACAGAAAATTGTCAGATTTCTTCGGGAAAGTTTTGATCCGAGTGCTTTT 3327
Query 874 -------------------------------------------------------------------------- 873
Sbjct 3328 TTGGTACCACGAGACCCGGCCCTCTGCCAGCATAAACCACTCACACCCCAGGGGGATGAGCTCTCCAAGCCCAG 3401
Query 874 -------------------------------------------------------------------------- 873
Sbjct 3402 GATTCTGGCAAGAGAGGTGAAGAAAGTGGATGCGCAGAGTTCGGCTGGAAAAGAGGACATGCTCCTAAGCAAAA 3475
Query 874 -------------------------------------------------------------------------- 873
Sbjct 3476 GCCCATCCTCACTCAGCGCTAACATCAGCAGCAGCCCAAAAGGTTCTCCTTCTTCATCAAGAAAAAGTGGAACC 3549
Query 874 -------------------------------------------------------------------------- 873
Sbjct 3550 AGCTGTCCCTCCAGCAAAAACAGCAGCCCTAATAGCAGCCCACGGACTTTGGGGAGGAGCAAAGGGAGGCTCCG 3623
Query 874 -------------------------------------------------------------------------- 873
Sbjct 3624 GCTGCCCCAGATTGGCAGCAAAAATAAGCCGTCAAGTAGTAAGAAGAACTTGGATGCCAGCAAAGAGAATGGGG 3697
Query 874 -------------------------------------------------------------------------- 873
Sbjct 3698 CTGGGCAGATCTGTGAGCTGGCTGACGCCTTGAGCCGAGGGCATATGCGGGGGGGCAGCCAACCAGAGCTGGTC 3771
Query 874 -------------------------------------------------------------------------- 873
Sbjct 3772 ACTCCTCAGGACCATGAGGTAGCTTTGGCCAATGGATTCCTTTATGAGCATGAAGCATGTGGCAATGGCTGTGG 3845
Query 874 -------------------------------------------------------------------------- 873
Sbjct 3846 CGATGGCTACAGCAATGGTCAGCTTGGAAACCACAGTGAAGAAGACAGCACTGATGACCAAAGAGAAGACACTC 3919
Query 874 -------------------------------------------------------------------------- 873
Sbjct 3920 ATATTAAGCCTATTTATAATCTATATGCAATTTCATGCCATTCAGGAATTCTGAGTGGGGGCCATTACATCACT 3993
Query 874 -------------------------------------------------------------------------- 873
Sbjct 3994 TATGCCAAAAACCCAAACTGCAAGTGGTACTGTTATAATGACAGCAGCTGTGAGGAACTTCACCCTGATGAAAT 4067
Query 874 -------------------------------------------------------------------------- 873
Sbjct 4068 TGACACCGACTCTGCCTACATTCTTTTCTATGAGCAGCAGGGGATAGACTACGCACAATTTCTGCCAAAGATTG 4141
Query 874 -------------------------------------------------------------------------- 873
Sbjct 4142 ATGGCAAAAAGATGGCAGACACAAGCAGTACGGATGAAGACTCTGAGTCTGATTACGAAAAGTACTCTATGTTA 4215
Query 874 --- 873
Sbjct 4216 CAG 4218
