Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_12794
Subject:
XM_011525175.2
Aligned Length:
1681
Identities:
844
Gaps:
812

Alignment

Query    1  ATGGACGTGGTAGAGGTCGCGGGCAGTTGGTGGGCACAAGAGCGAGAGGACATCATTATGAAATACGAAAAGGG  74
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGGACGTGGTAGAGGTCGCGGGCAGTTGGTGGGCACAAGAGCGAGAGGACATCATTATGAAATACGAAAAGGG  74

Query   75  ACACCGAGCTGGGCTGCCAGAGGACAAGGGGCCTAAGCCTTTTCGAAGCTACAACAACAACGTCGATCATTTGG  148
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  ACACCGAGCTGGGCTGCCAGAGGACAAGGGGCCTAAGCCTTTTCGAAGCTACAACAACAACGTCGATCATTTGG  148

Query  149  GGATTGTACA----------------------------------------------------------------  158
            ||||||||||                                                                
Sbjct  149  GGATTGTACAGTCCTGCCCCTCCTGGGAATCAGCCCCACAGGAAGGCCCTTGTCCTCCCTTCCCTGTGCCTTCT  222

Query  159  --------------------------------------------------------------------------  158
                                                                                      
Sbjct  223  CCTGGGCTGAGCCCTGAGCTGGAAAGGGACAGAGCCAGTCCTTTCTGGGGGTCGGCACCCAGGCTGGGGCCGCT  296

Query  159  ---------------------------------------------TGAGACGGAGCTGCCTCCTCTGACTGCGC  187
                                                         |||||||||||||||||||||||||||||
Sbjct  297  CCAGGCCCCGTGCAGTTCCTCAGCTCTGCCTGGGTTGCCTTACAGTGAGACGGAGCTGCCTCCTCTGACTGCGC  370

Query  188  GGGAGGCGAAGCAAATTCGGCGGGAGATCAGCCGAAAGAGCAAGTGGGTGGATATGCTGGGAGACTGGGAGAAA  261
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  GGGAGGCGAAGCAAATTCGGCGGGAGATCAGCCGAAAGAGCAAGTGGGTGGATATGCTGGGAGACTGGGAGAAA  444

Query  262  TACAAAAGCAGCAGAAAGCTCATAGATCGAGCGTACAAGGGAATGCCCATGAACATCCGGGGCCCGATGTGGTC  335
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  TACAAAAGCAGCAGAAAGCTCATAGATCGAGCGTACAAGGGAATGCCCATGAACATCCGGGGCCCGATGTGGTC  518

Query  336  AGTCCTCCTGAACACTGAGGAAATGAAGATGAAAAACCCCGGAAGATACCAGATCATGAAGGAGAAGGGCAAGA  409
            ||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  AGTCCTCCTGAACACTGAGGAAATGAAGTTGAAAAACCCCGGAAGATACCAGATCATGAAGGAGAAGGGCAAGA  592

Query  410  GGTCATCTGAGCACATCCAGCGCATCGACCGGGACGTAAGCGGGACATTAAGGAAGCATATATTCTTCAGGGAT  483
            |||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||.||||||||||||
Sbjct  593  GGTCATCTGAGCACATCCAGCGCATCGACCGGGACATAAGCGGGACATTAAGGAAGCATATGTTCTTCAGGGAT  666

Query  484  CGATACGGAACCAAGCAGCGGGAACTACTCCACATCCTCCTGGCATATGAGGAGTATAACCCGGAGGTGGGCTA  557
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  CGATACGGAACCAAGCAGCGGGAACTACTCCACATCCTCCTGGCATATGAGGAGTATAACCCGGAGGTGGGCTA  740

Query  558  CTGCAGGGACCTGAGCCACATCGCCGCCTTGTTCCTCCTCTATCTTCCTGAGGAGGATGCATTCTGGGCACTGG  631
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  CTGCAGGGACCTGAGCCACATCGCCGCCTTGTTCCTCCTCTATCTTCCTGAGGAGGATGCATTCTGGGCACTGG  814

Query  632  TGCAGCTGCTGGCCAGTGAGAGGCACTCCCTGCAGGGATTTCACAGCCCAAATGGCGGGACCGTCCAGGGGCTC  705
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  TGCAGCTGCTGGCCAGTGAGAGGCACTCCCTGCAGGGATTTCACAGCCCAAATGGCGGGACCGTCCAGGGGCTC  888

Query  706  CAAGACCAACAGGAGCATGTGGTAGCCACGTCACAACCCAAGACCATGGGGCATCAGAGC--------------  765
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||..|              
Sbjct  889  CAAGACCAACAGGAGCATGTGGTAGCCACGTCACAACCCAAGACCATGGGGCATCAGGACAAGAAAGATCTATG  962

Query  766  -----------------------GCCTCA--CGAA--------GACG-------TCCAGG--------TGTGGC  791
                                   ||||||  ||.|        ||||       ||..||        || .||
Sbjct  963  TGGGCAGTGTTCCCCGTTAGGCTGCCTCATCCGGATATTGATTGACGGGATCTCTCTCGGGCTCACCCTG-CGC  1035

Query  792  CCGTGGGCACGTTTTT----------GC-AACCGGTTCGTTGAT------------------------------  824
            |.||||| ||||.|.|          || |||.||  |||||||                              
Sbjct 1036  CTGTGGG-ACGTGTATCTGGTAGAAGGCGAACAGG--CGTTGATGCCGATAACAAGAATCGCCTTTAAGGTTCA  1106

Query  825  ---------ACCTGGGCCAGGGATGAGGACA-------CTGTGC-----TCA------------AGCATCT--T  863
                     |||.|.||.||||..|..|.||       ||||||     |||            |.|.|||  .
Sbjct 1107  GCAGACCAAACCCGAGCAAGGGTCGTCGGCATCCAGGCCTGTGCCGGCTTCACGTGGCGGGAAGACCCTCTGCA  1180

Query  864  AGGG-------------CCTCTA---------------------------------------------------  873
            ||||             ||||.|                                                   
Sbjct 1181  AGGGGGACAGGCAGGCCCCTCCAGGCCCACCAGCCCGGTTCCCGCGGCCCATTTGGTCAGCTTCCCCGCCACGG  1254

Query  874  --------------------------------------------------------------------------  873
                                                                                      
Sbjct 1255  GCACCTCGTTCTTCCACACCCTGTCCTGGTGGGGCTGTCCGGGAAGACACCTACCCTGTGGGCACTCAGGGTGT  1328

Query  874  --------------------------------------------------------------------------  873
                                                                                      
Sbjct 1329  GCCCAGCCCGGCCCTGGCTCAGGGAGGACCTCAGGGTTCCTGGAGATTCCTGCAGTGGAACTCCATGCCCCGCC  1402

Query  874  --------------------------------------------------------------------------  873
                                                                                      
Sbjct 1403  TCCCAACGGACCTGGACGTAGAGGGCCCTTGGTTCCGCCATTATGATTTCAGACAGAGCTGCTGGGTCCGTGCC  1476

Query  874  --------------------------------------------------------------------------  873
                                                                                      
Sbjct 1477  ATATCCCAGGAGGACCAGCTGGCCCCCTGCTGGCAGGCTGAACACCCTGCGGAGCGGGTGAGATCGGCTTTCGC  1550

Query  874  --------------------------------------------------------------------------  873
                                                                                      
Sbjct 1551  TGCACCCAGCACTGATTCCGACCAGGGCACCCCCTTCAGAGCTAGGGACGAACAGCAGTGTGCTCCCACCTCAG  1624

Query  874  -----------------------------------------------------  873
                                                                 
Sbjct 1625  GGCCTTGCCTCTGCGGCCTCCACTTGGAAAGTTCTCAGTTCCCTCCAGGCTTC  1677

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