Nucleotide Global Alignment

Description

• Query: ccsbBroadEn_12840
• Subject: NM_001286547.3
• Aligned Length: 1425
• Identities: 879
• Gaps: 546

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGATAAACACAGGAACTCAAATGGATTTAGAGGTTAAAGGAGTTGCTGCCACTTCTAGGAGCCAAATTCAGCC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  ATTCTTTGGAAGAAAGAAGCCTCTACAACAAAGGTGGACTTCTGAGTCATGGACAAACCAGAATTCTTGCCCAC  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  CAGTGGTCCCACGACTTGATTTGGGAAGCCTTGTTGACTCTGATGATGAGGATCAGAACATAATACCTGAAAAT  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  TTGCCAGCACCAACAGACAAATGTAAACTAAAATATCAGCAATGTAAAACTGAAATTAAAGAGGGCTATAAGCA  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  GTATAGTCAGAGAAATGCAGAAAATACAAAATCAAATGTTACACATAAACAGTCTCCAAGAAACAAGATAGATG  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  AAAAGTGTGTGCAAGATGAAGAAGCCAACACAGATGACCTTACGACTCTGGATAGGAAAGCCATCTTACAGCAA  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  GGTTATGCAGACAACTCTTGCGATAAACAACAGAGGGCAAGAAAATTGGATGCAGAAATTGTGGCTGCAGAGAA  518

Query    1  ----------------------------ATGATAGACCACTTATCTAGGGCTGTCATCAGTGATCCAGAGCAAA  46
                                        ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  GAAGAAACAGATTGTTGCAGAGCAAGTGATGATAGACCACTTATCTAGGGCTGTCATCAGTGATCCAGAGCAAA  592

Query   47  ATTTAGCCATTGAGCAAAAAGAAAGTGATCATATCCTTCCAGATTCAAAGATGACACCTCTTCGATTTAGAAAA  120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  ATTTAGCCATTGAGCAAAAAGAAAGTGATCATATCCTTCCAGATTCAAAGATGACACCTCTTCGATTTAGAAAA  666

Query  121  AGAACACTACATGAAACAAAGATAAGAACTCATTCTACATTAACTGAAAATGTGCTTTCTCATAAATTACAGTT  194
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  AGAACACTACATGAAACAAAGATAAGAACTCATTCTACATTAACTGAAAATGTGCTTTCTCATAAATTACAGTT  740

Query  195  TGATGGTAGGATCGTATCACGAACAAATGTGCTTCCTTTTATTCAAAAAAGCATTTATAGTCATCAGTGTGGAC  268
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  TGATGGTAGGATCGTATCACGAACAAATGTGCTTCCTTTTATTCAAAAAAGCATTTATAGTCATCAGTGTGGAC  814

Query  269  GAAGAAAAGGAAAACAATACCGACTTGGTGATTTTTATGTTGGTGCAACCTTGACATTTTTGAGTTCTGATCAT  342
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  GAAGAAAAGGAAAACAATACCGACTTGGTGATTTTTATGTTGGTGCAACCTTGACATTTTTGAGTTCTGATCAT  888

Query  343  CTCAGCCTTCCAGAAAGCATCAAAGAAAACACATTACTTAAACTCCGAATCACAAATATTGATCAAATAGCTTT  416
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  CTCAGCCTTCCAGAAAGCATCAAAGAAAACACATTACTTAAACTCCGAATCACAAATATTGATCAAATAGCTTT  962

Query  417  GGATTCTCTCAAAACTGCTTCTATGGAACAGGAGGATGATATAATCATTCAAGAAACCAATGATAGGCTGGTCT  490
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  GGATTCTCTCAAAACTGCTTCTATGGAACAGGAGGATGATATAATCATTCAAGAAACCAATGATAGGCTGGTCT  1036

Query  491  TCAAAGCAATTCAAGATGTGCTAAAAGAAAAACTACATAAAAGAGGTGTTCGTATTTTGACTGGATTGGGAAAA  564
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  TCAAAGCAATTCAAGATGTGCTAAAAGAAAAACTACATAAAAGAGGTGTTCGTATTTTGACTGGATTGGGAAAA  1110

Query  565  TATTTTCAACAGTTGGACAAGGAAGGAAATGGACTTTTAGATAAGGCAGATTTTAAGCAAGCTCTAAAAGTGTT  638
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111  TATTTTCAACAGTTGGACAAGGAAGGAAATGGACTTTTAGATAAGGCAGATTTTAAGCAAGCTCTAAAAGTGTT  1184

Query  639  TCACTTAGAAGTGTCTGAAAAGGATTTTGAGTCTGCATGGCTAATTCTGAATGACAATGGCAATGGCAAGGTTG  712
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185  TCACTTAGAAGTGTCTGAAAAGGATTTTGAGTCTGCATGGCTAATTCTGAATGACAATGGCAATGGCAAGGTTG  1258

Query  713  ATTATGGAGAATTCAAACGTGGTATTATTGGTGAAATGAATGAATACAGGAAATCATATGTTCGAAAGGCCTTT  786
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259  ATTATGGAGAATTCAAACGTGGTATTATTGGTGAAATGAATGAATACAGGAAATCATATGTTCGAAAGGCCTTT  1332

Query  787  ATGAAACTGGATTTCAACAAAAGTGGCAGTGTGCCTATTATAAACATAAGAAAATGTTACTGTGCAAAGAAGCA  860
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333  ATGAAACTGGATTTCAACAAAAGTGGCAGTGTGCCTATTATAAACATAAGAAAATGTTACTGTGCAAAGAAGCA  1406

Query  861  TTCTCAAGTAATTTCAGGT  879
            |||||||||||||||||||
Sbjct 1407  TTCTCAAGTAATTTCAGGT  1425